RNA–Protein interactions for RNA: ENST00000393599.2

CDKN2D-202, Transcript of cyclin dependent kinase inhibitor 2D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2D, Length 1,422 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2D-202ENST00000393599 NISCHQ9Y2I1 1504 aa66.9■■■■■ 8.3
CDKN2D-202ENST00000393599 CCDC180Q9P1Z9 1646 aa59.35■■■■■ 7.09
CDKN2D-202ENST00000393599 ABCC9O60706 1549 aa57.97■■■■■ 6.87
CDKN2D-202ENST00000393599 DCAF8L2P0C7V8 631 aa55.81■■■■■ 6.53
CDKN2D-202ENST00000393599 ZCCHC6Q5VYS8 1495 aaKnown RBP55.78■■■■■ 6.52
CDKN2D-202ENST00000393599 RB1CC1Q8TDY2 1594 aa55.76■■■■■ 6.52
CDKN2D-202ENST00000393599 NACADO15069 1562 aa55.74■■■■■ 6.51
CDKN2D-202ENST00000393599 MYO15BQ96JP2 1530 aa55.45■■■■■ 6.47
CDKN2D-202ENST00000393599 DCAF1Q9Y4B6 1507 aa55.31■■■■■ 6.44
CDKN2D-202ENST00000393599 UNC13AQ9UPW8 1703 aa54.56■■■■■ 6.32
CDKN2D-202ENST00000393599 SCRIBQ14160 1630 aa54.26■■■■■ 6.28
CDKN2D-202ENST00000393599 PABPN1Q86U42 306 aaKnown RBP eCLIP54.2■■■■■ 6.27
CDKN2D-202ENST00000393599 BICRAQ9NZM4 1560 aa54.14■■■■■ 6.26
CDKN2D-202ENST00000393599 SHROOM4Q9ULL8 1493 aa53.47■■■■■ 6.15
CDKN2D-202ENST00000393599 DNAJC5BQ9UF47 199 aa53.04■■■■■ 6.08
CDKN2D-202ENST00000393599 EIF4G1Q04637 1599 aaKnown RBP52.67■■■■■ 6.02
CDKN2D-202ENST00000393599 CC2D2AQ9P2K1 1620 aa52.41■■■■■ 5.98
CDKN2D-202ENST00000393599 CECR2Q9BXF3 1484 aa52.15■■■■■ 5.94
CDKN2D-202ENST00000393599 SMARCA4P51532 1647 aa51.88■■■■■ 5.9
CDKN2D-202ENST00000393599 BAZ1AQ9NRL2 1556 aaPredicted RBP51.81■■■■■ 5.88
CDKN2D-202ENST00000393599 MROH2BQ7Z745 1585 aa51.6■■■■■ 5.85
CDKN2D-202ENST00000393599 ATAD2BQ9ULI0 1458 aa51.54■■■■■ 5.84
CDKN2D-202ENST00000393599 SMARCA2P51531 1590 aa51.45■■■■■ 5.83
CDKN2D-202ENST00000393599 NCAPD3P42695 1498 aa51.45■■■■■ 5.83
CDKN2D-202ENST00000393599 PEG3Q9GZU2 1588 aa51.34■■■■■ 5.81
CDKN2D-202ENST00000393599 HMGXB3Q12766 1538 aa51.22■■■■■ 5.79
CDKN2D-202ENST00000393599 BAZ1BQ9UIG0 1483 aaKnown RBP51.12■■■■■ 5.77
CDKN2D-202ENST00000393599 WIZO95785 1651 aa51.06■■■■■ 5.76
CDKN2D-202ENST00000393599 RSF1Q96T23 1441 aaPredicted RBP51.06■■■■■ 5.76
CDKN2D-202ENST00000393599 TOP2AP11388 1531 aaKnown RBP50.49■■■■■ 5.67
CDKN2D-202ENST00000393599 NESP48681 1621 aa50.24■■■■■ 5.63
CDKN2D-202ENST00000393599 LAMC3Q9Y6N6 1575 aa50.05■■■■■ 5.6
CDKN2D-202ENST00000393599 CADPSQ9ULU8 1353 aa49.96■■■■■ 5.59
CDKN2D-202ENST00000393599 SUPT5HO00267 1087 aaKnown RBP49.94■■■■■ 5.58
CDKN2D-202ENST00000393599 CCDC88BA6NC98 1476 aa49.92■■■■■ 5.58
CDKN2D-202ENST00000393599 ERCC6Q03468 1493 aa49.9■■■■■ 5.58
CDKN2D-202ENST00000393599 CFTRP13569 1480 aa49.72■■■■■ 5.55
CDKN2D-202ENST00000393599 PDS5BQ9NTI5 1447 aa49.7■■■■■ 5.55
CDKN2D-202ENST00000393599 KIF21AQ7Z4S6 1674 aa49.62■■■■■ 5.53
CDKN2D-202ENST00000393599 FANCD2Q9BXW9 1451 aa49.42■■■■■ 5.5
CDKN2D-202ENST00000393599 THOC2Q8NI27 1593 aaKnown RBP49.41■■■■■ 5.5
CDKN2D-202ENST00000393599 PRDM2Q13029 1718 aa49.35■■■■■ 5.49
CDKN2D-202ENST00000393599 CEP164Q9UPV0 1460 aa49.32■■■■■ 5.49
CDKN2D-202ENST00000393599 CUX2O14529 1486 aa49.26■■■■■ 5.48
CDKN2D-202ENST00000393599 MRC2Q9UBG0 1479 aa49.22■■■■■ 5.47
CDKN2D-202ENST00000393599 WDR62O43379 1518 aa49.06■■■■■ 5.44
CDKN2D-202ENST00000393599 URB2Q14146 1524 aaKnown RBP48.95■■■■■ 5.43
CDKN2D-202ENST00000393599 TOPBP1Q92547 1522 aa48.66■■■■■ 5.38
CDKN2D-202ENST00000393599 DNMBPQ6XZF7 1577 aa48.61■■■■■ 5.37
CDKN2D-202ENST00000393599 ABCC8Q09428 1581 aa48.57■■■■■ 5.37
CDKN2D-202ENST00000393599 CUX1P39880 1505 aa48.39■■■■■ 5.34
CDKN2D-202ENST00000393599 POLA1P09884 1462 aaPredicted RBP48.27■■■■■ 5.32
CDKN2D-202ENST00000393599 IFT140Q96RY7 1462 aa48.27■■■■■ 5.32
CDKN2D-202ENST00000393599 FGD5Q6ZNL6 1462 aa48.18■■■■■ 5.3
CDKN2D-202ENST00000393599 WRNQ14191 1432 aaPredicted RBP eCLIP48.12■■■■■ 5.29
CDKN2D-202ENST00000393599 TARBP1Q13395 1621 aaKnown RBP48.12■■■■■ 5.29
CDKN2D-202ENST00000393599 ZNF608Q9ULD9 1512 aaPredicted RBP48.11■■■■■ 5.29
CDKN2D-202ENST00000393599 RAD54L2Q9Y4B4 1467 aa48.08■■■■■ 5.29
CDKN2D-202ENST00000393599 SYNJ1O43426 1573 aa48.04■■■■■ 5.28
CDKN2D-202ENST00000393599 SOGA1O94964 1423 aa48.04■■■■■ 5.28
CDKN2D-202ENST00000393599 TOP2BQ02880 1626 aa47.99■■■■■ 5.27
CDKN2D-202ENST00000393599 BIVM-ERCC5R4GMW8 1640 aa47.99■■■■■ 5.27
CDKN2D-202ENST00000393599 EIF4G3O43432 1585 aaKnown RBP47.91■■■■■ 5.26
CDKN2D-202ENST00000393599 AQRO60306 1485 aaKnown RBP eCLIP47.84■■■■■ 5.254e-6■■■■□ 20.2
CDKN2D-202ENST00000393599 TDRD9Q8NDG6 1382 aaKnown RBP47.79■■■■■ 5.24
CDKN2D-202ENST00000393599 WDR97A6NE52 1622 aa47.78■■■■■ 5.24
CDKN2D-202ENST00000393599 ABCA10Q8WWZ4 1543 aa47.7■■■■■ 5.23
CDKN2D-202ENST00000393599 DNAJC5Q9H3Z4 198 aa47.53■■■■■ 5.2
CDKN2D-202ENST00000393599 ABCA5Q8WWZ7 1642 aa47.51■■■■■ 5.2
CDKN2D-202ENST00000393599 GAPVD1Q14C86 1478 aa47.5■■■■■ 5.19
CDKN2D-202ENST00000393599 GRIN2BQ13224 1484 aa47.46■■■■■ 5.19
CDKN2D-202ENST00000393599 SNAPC4Q5SXM2 1469 aa47.4■■■■■ 5.18
CDKN2D-202ENST00000393599 PBRM1Q86U86 1689 aa47.4■■■■■ 5.18
CDKN2D-202ENST00000393599 MAGI1Q96QZ7 1491 aaPredicted RBP47.29■■■■■ 5.16
CDKN2D-202ENST00000393599 CHD1O14646 1710 aa47.27■■■■■ 5.16
CDKN2D-202ENST00000393599 OSCARQ8IYS5 282 aa47.25■■■■■ 5.15
CDKN2D-202ENST00000393599 FBLN2P98095 1184 aa47.21■■■■■ 5.15
CDKN2D-202ENST00000393599 SYNJ2O15056 1496 aa47.12■■■■■ 5.13
CDKN2D-202ENST00000393599 ERICH3Q5RHP9 1530 aa47.11■■■■■ 5.13
CDKN2D-202ENST00000393599 TRIM41Q8WV44 630 aa47.1■■■■■ 5.13
CDKN2D-202ENST00000393599 KIF27Q86VH2 1401 aa47.08■■■■■ 5.13
CDKN2D-202ENST00000393599 CHMP7Q8WUX9 453 aaPredicted RBP47.07■■■■■ 5.13
CDKN2D-202ENST00000393599 ADAMTS12P58397 1594 aa47.06■■■■■ 5.12
CDKN2D-202ENST00000393599 FHAD1B1AJZ9 1412 aa46.94■■■■■ 5.11
CDKN2D-202ENST00000393599 IGF1RP08069 1367 aa46.88■■■■■ 5.1
CDKN2D-202ENST00000393599 GRIN2AQ12879 1464 aa46.87■■■■■ 5.09
CDKN2D-202ENST00000393599 RUSC2Q8N2Y8 1516 aa46.81■■■■■ 5.08
CDKN2D-202ENST00000393599 CLASP1Q7Z460 1538 aa46.75■■■■■ 5.08
CDKN2D-202ENST00000393599 CUL7Q14999 1698 aa46.73■■■■■ 5.07
CDKN2D-202ENST00000393599 CHIC1Q5VXU3 224 aa46.71■■■■■ 5.07
CDKN2D-202ENST00000393599 CEP170Q5SW79 1584 aa46.66■■■■■ 5.06
CDKN2D-202ENST00000393599 NUP160Q12769 1436 aa46.64■■■■■ 5.06
CDKN2D-202ENST00000393599 CARMIL1Q5VZK9 1371 aa46.59■■■■■ 5.05
CDKN2D-202ENST00000393599 ARHGEF11O15085 1522 aa46.55■■■■■ 5.04
CDKN2D-202ENST00000393599 RIMBP3CA6NJZ7 1639 aa46.54■■■■■ 5.04
CDKN2D-202ENST00000393599 RIMBP3BA6NNM3 1639 aa46.54■■■■■ 5.04
CDKN2D-202ENST00000393599 RIMBP3Q9UFD9 1639 aa46.54■■■■■ 5.04
CDKN2D-202ENST00000393599 RAPGEF2Q9Y4G8 1499 aa46.34■■■■■ 5.01
CDKN2D-202ENST00000393599 SHROOM2Q13796 1616 aa46.28■■■■■ 5
CDKN2D-202ENST00000393599 EEA1Q15075 1411 aa46.26■■■■■ 5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms