RNA–Protein interactions for RNA: ENST00000613478.1

CISD3-204, Transcript of CDGSH iron sulfur domain 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CISD3, Length 2,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISD3-204ENST00000613478 NISCHQ9Y2I1 1504 aa61.15■■■■■ 7.38
CISD3-204ENST00000613478 CCDC180Q9P1Z9 1646 aa53■■■■■ 6.07
CISD3-204ENST00000613478 ZCCHC6Q5VYS8 1495 aaKnown RBP51.43■■■■■ 5.82
CISD3-204ENST00000613478 DCAF8L2P0C7V8 631 aa50.75■■■■■ 5.71
CISD3-204ENST00000613478 SHROOM4Q9ULL8 1493 aa50.62■■■■■ 5.69
CISD3-204ENST00000613478 DCAF1Q9Y4B6 1507 aa50.35■■■■■ 5.65
CISD3-204ENST00000613478 ABCC9O60706 1549 aa49.98■■■■■ 5.59
CISD3-204ENST00000613478 MYO15BQ96JP2 1530 aa49.6■■■■■ 5.53
CISD3-204ENST00000613478 NACADO15069 1562 aa49.26■■■■■ 5.48
CISD3-204ENST00000613478 SCRIBQ14160 1630 aa49.03■■■■■ 5.44
CISD3-204ENST00000613478 SUPT5HO00267 1087 aaKnown RBP48.92■■■■■ 5.42
CISD3-204ENST00000613478 RB1CC1Q8TDY2 1594 aa48.79■■■■■ 5.4
CISD3-204ENST00000613478 UNC13AQ9UPW8 1703 aa47.93■■■■■ 5.26
CISD3-204ENST00000613478 RSF1Q96T23 1441 aaPredicted RBP47.72■■■■■ 5.23
CISD3-204ENST00000613478 CECR2Q9BXF3 1484 aa47.68■■■■■ 5.22
CISD3-204ENST00000613478 MROH2BQ7Z745 1585 aa47.38■■■■■ 5.18
CISD3-204ENST00000613478 PABPN1Q86U42 306 aaKnown RBP eCLIP47.38■■■■■ 5.18
CISD3-204ENST00000613478 BICRAQ9NZM4 1560 aa47.38■■■■■ 5.18
CISD3-204ENST00000613478 BAZ1AQ9NRL2 1556 aaPredicted RBP47.1■■■■■ 5.13
CISD3-204ENST00000613478 WIZO95785 1651 aa47.03■■■■■ 5.12
CISD3-204ENST00000613478 CHIC1Q5VXU3 224 aa46.98■■■■■ 5.11
CISD3-204ENST00000613478 SMARCA4P51532 1647 aa46.89■■■■■ 5.1
CISD3-204ENST00000613478 TOP2AP11388 1531 aaKnown RBP46.38■■■■■ 5.02
CISD3-204ENST00000613478 PEG3Q9GZU2 1588 aa46.19■■■■■ 4.98
CISD3-204ENST00000613478 CCDC88BA6NC98 1476 aa46.07■■■■■ 4.97
CISD3-204ENST00000613478 ATAD2BQ9ULI0 1458 aa46.05■■■■■ 4.96
CISD3-204ENST00000613478 SMARCA2P51531 1590 aa46.05■■■■■ 4.96
CISD3-204ENST00000613478 EIF4G1Q04637 1599 aaKnown RBP45.89■■■■■ 4.94
CISD3-204ENST00000613478 TRIM41Q8WV44 630 aa45.81■■■■■ 4.92
CISD3-204ENST00000613478 BAZ1BQ9UIG0 1483 aaKnown RBP45.8■■■■■ 4.92
CISD3-204ENST00000613478 NCAPD3P42695 1498 aa45.49■■■■■ 4.87
CISD3-204ENST00000613478 HMGXB3Q12766 1538 aa45.44■■■■■ 4.87
CISD3-204ENST00000613478 LOC105371045A0A1W2PR82 267 aa45.39■■■■■ 4.86
CISD3-204ENST00000613478 ABCC8Q09428 1581 aa45.35■■■■■ 4.85
CISD3-204ENST00000613478 FAM9AQ8IZU1 332 aaPredicted RBP45.21■■■■■ 4.83
CISD3-204ENST00000613478 CC2D2AQ9P2K1 1620 aa45.15■■■■■ 4.82
CISD3-204ENST00000613478 WRNQ14191 1432 aaPredicted RBP eCLIP44.86■■■■■ 4.77
CISD3-204ENST00000613478 EHMT2Q96KQ7 1210 aa44.73■■■■■ 4.75
CISD3-204ENST00000613478 SYNJ1O43426 1573 aa44.7■■■■■ 4.75
CISD3-204ENST00000613478 CFTRP13569 1480 aa44.65■■■■■ 4.74
CISD3-204ENST00000613478 SOGA1O94964 1423 aa44.62■■■■■ 4.73
CISD3-204ENST00000613478 RUSC2Q8N2Y8 1516 aa44.48■■■■■ 4.71
CISD3-204ENST00000613478 PRDM2Q13029 1718 aa44.44■■■■■ 4.7
CISD3-204ENST00000613478 CADPSQ9ULU8 1353 aa44.43■■■■■ 4.7
CISD3-204ENST00000613478 TOP2BQ02880 1626 aa44.36■■■■■ 4.69
CISD3-204ENST00000613478 EEA1Q15075 1411 aa44.28■■■■■ 4.68
CISD3-204ENST00000613478 BIVM-ERCC5R4GMW8 1640 aa44.27■■■■■ 4.68
CISD3-204ENST00000613478 CSRNP3Q8WYN3 585 aa44.25■■■■■ 4.67
CISD3-204ENST00000613478 CUX1P39880 1505 aa44.24■■■■■ 4.67
CISD3-204ENST00000613478 DNAJC5BQ9UF47 199 aa44.23■■■■■ 4.67
CISD3-204ENST00000613478 PCGF6Q9BYE7 350 aa44.17■■■■■ 4.66
CISD3-204ENST00000613478 NESP48681 1621 aa44.07■■■■■ 4.65
CISD3-204ENST00000613478 FANCD2Q9BXW9 1451 aa43.96■■■■■ 4.63
CISD3-204ENST00000613478 LAMC3Q9Y6N6 1575 aa43.89■■■■■ 4.62
CISD3-204ENST00000613478 HRCP23327 699 aa43.88■■■■■ 4.61
CISD3-204ENST00000613478 GOLGA3Q08378 1498 aa43.83■■■■■ 4.61
CISD3-204ENST00000613478 UBTFP17480 764 aaKnown RBP43.82■■■■■ 4.61
CISD3-204ENST00000613478 TNIKQ9UKE5 1360 aa43.81■■■■■ 4.6
CISD3-204ENST00000613478 TRIM26Q12899 539 aaPredicted RBP43.79■■■■■ 4.6
CISD3-204ENST00000613478 CEP164Q9UPV0 1460 aa43.77■■■■■ 4.6
CISD3-204ENST00000613478 KIF21BO75037 1637 aa43.75■■■■■ 4.59
CISD3-204ENST00000613478 CEP162Q5TB80 1403 aa43.69■■■■■ 4.58
CISD3-204ENST00000613478 FGD5Q6ZNL6 1462 aa43.67■■■■■ 4.58
CISD3-204ENST00000613478 KIF27Q86VH2 1401 aa43.63■■■■■ 4.58
CISD3-204ENST00000613478 RAPGEF2Q9Y4G8 1499 aa43.63■■■■■ 4.57
CISD3-204ENST00000613478 DNMBPQ6XZF7 1577 aa43.56■■■■■ 4.56
CISD3-204ENST00000613478 TOPBP1Q92547 1522 aa43.53■■■■■ 4.56
CISD3-204ENST00000613478 PDS5BQ9NTI5 1447 aa43.53■■■■■ 4.56
CISD3-204ENST00000613478 CUX2O14529 1486 aa43.5■■■■■ 4.55
CISD3-204ENST00000613478 PRXQ9BXM0 1461 aa43.48■■■■■ 4.55
CISD3-204ENST00000613478 URB2Q14146 1524 aaKnown RBP43.43■■■■■ 4.54
CISD3-204ENST00000613478 KIF21AQ7Z4S6 1674 aa43.42■■■■■ 4.54
CISD3-204ENST00000613478 POLA1P09884 1462 aaPredicted RBP43.38■■■■■ 4.54
CISD3-204ENST00000613478 RAD54L2Q9Y4B4 1467 aa43.37■■■■■ 4.53
CISD3-204ENST00000613478 ERICH3Q5RHP9 1530 aa43.34■■■■■ 4.53
CISD3-204ENST00000613478 PPARGC1BQ86YN6 1023 aaKnown RBP43.33■■■■■ 4.53
CISD3-204ENST00000613478 IGF1RP08069 1367 aa43.31■■■■■ 4.52
CISD3-204ENST00000613478 CLIP1P30622 1438 aa43.22■■■■■ 4.51
CISD3-204ENST00000613478 RANGAP1P46060 587 aaPredicted RBP43.2■■■■■ 4.51
CISD3-204ENST00000613478 ABCA10Q8WWZ4 1543 aa43.2■■■■■ 4.51
CISD3-204ENST00000613478 CARMIL1Q5VZK9 1371 aa43.07■■■■■ 4.49
CISD3-204ENST00000613478 WDR97A6NE52 1622 aa43.01■■■■■ 4.48
CISD3-204ENST00000613478 MRC2Q9UBG0 1479 aa42.97■■■■■ 4.47
CISD3-204ENST00000613478 TDRD9Q8NDG6 1382 aaKnown RBP42.93■■■■■ 4.46
CISD3-204ENST00000613478 TTBK1Q5TCY1 1321 aaPredicted RBP42.88■■■■■ 4.45
CISD3-204ENST00000613478 VPS8Q8N3P4 1428 aa42.86■■■■■ 4.45
CISD3-204ENST00000613478 TARBP1Q13395 1621 aaKnown RBP42.82■■■■■ 4.45
CISD3-204ENST00000613478 ABCA5Q8WWZ7 1642 aa42.8■■■■■ 4.44
CISD3-204ENST00000613478 GAPVD1Q14C86 1478 aa42.76■■■■■ 4.44
CISD3-204ENST00000613478 ARAP1Q96P48 1450 aa42.76■■■■■ 4.44
CISD3-204ENST00000613478 ERCC6Q03468 1493 aa42.75■■■■■ 4.43
CISD3-204ENST00000613478 WDR62O43379 1518 aa42.73■■■■■ 4.43
CISD3-204ENST00000613478 CUL7Q14999 1698 aa42.73■■■■■ 4.43
CISD3-204ENST00000613478 ZEB1P37275 1124 aaPredicted RBP42.7■■■■■ 4.43
CISD3-204ENST00000613478 ARHGAP35Q9NRY4 1499 aa42.66■■■■■ 4.42
CISD3-204ENST00000613478 AQRO60306 1485 aaKnown RBP eCLIP42.56■■■■■ 4.42e-10■■■■■ 47.9
CISD3-204ENST00000613478 THOC2Q8NI27 1593 aaKnown RBP42.56■■■■■ 4.4
CISD3-204ENST00000613478 APLP2Q06481 763 aa42.49■■■■■ 4.39
CISD3-204ENST00000613478 IFT140Q96RY7 1462 aa42.48■■■■■ 4.39
CISD3-204ENST00000613478 PBRM1Q86U86 1689 aa42.46■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms