RNA–Protein interactions for RNA: ENST00000400521.6

TXNRD2-204, Transcript of thioredoxin reductase 2, human

APPRIS P2 TSL 1 (best) BASIC

Gene TXNRD2, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD2-204	ENST00000400521	NISCH	Q9Y2I1	1504 aa		57.04	■■■■■ 6.72
TXNRD2-204	ENST00000400521	CCDC180	Q9P1Z9	1646 aa		48.75	■■■■■ 5.39
TXNRD2-204	ENST00000400521	ZCCHC6	Q5VYS8	1495 aa	Known RBP	48.33	■■■■■ 5.33
TXNRD2-204	ENST00000400521	SHROOM4	Q9ULL8	1493 aa		48.23	■■■■■ 5.31
TXNRD2-204	ENST00000400521	SUPT5H	O00267	1087 aa	Known RBP	47.31	■■■■■ 5.16
TXNRD2-204	ENST00000400521	DCAF1	Q9Y4B6	1507 aa		47.02	■■■■■ 5.12
TXNRD2-204	ENST00000400521	DCAF8L2	P0C7V8	631 aa		46.71	■■■■■ 5.07
TXNRD2-204	ENST00000400521	CHIC1	Q5VXU3	224 aa		46.22	■■■■■ 4.99
TXNRD2-204	ENST00000400521	MYO15B	Q96JP2	1530 aa		46.1	■■■■■ 4.97
TXNRD2-204	ENST00000400521	ABCC9	O60706	1549 aa		45.68	■■■■■ 4.9
TXNRD2-204	ENST00000400521	SCRIB	Q14160	1630 aa		45.37	■■■■■ 4.85
TXNRD2-204	ENST00000400521	RSF1	Q96T23	1441 aa	Predicted RBP	45.06	■■■■■ 4.8
TXNRD2-204	ENST00000400521	HRC	P23327	699 aa		44.95	■■■■■ 4.79
TXNRD2-204	ENST00000400521	NACAD	O15069	1562 aa		44.92	■■■■■ 4.78
TXNRD2-204	ENST00000400521	RB1CC1	Q8TDY2	1594 aa		44.74	■■■■■ 4.75
TXNRD2-204	ENST00000400521	PCGF6	Q9BYE7	350 aa		44.69	■■■■■ 4.74
TXNRD2-204	ENST00000400521	LOC105371045	A0A1W2PR82	267 aa		44.65	■■■■■ 4.74
TXNRD2-204	ENST00000400521	CECR2	Q9BXF3	1484 aa		44.31	■■■■■ 4.68
TXNRD2-204	ENST00000400521	MROH2B	Q7Z745	1585 aa		44.25	■■■■■ 4.67
TXNRD2-204	ENST00000400521	TRIM41	Q8WV44	630 aa		44.21	■■■■■ 4.67
TXNRD2-204	ENST00000400521	WIZ	O95785	1651 aa		44.06	■■■■■ 4.64
TXNRD2-204	ENST00000400521	TRIM26	Q12899	539 aa	Predicted RBP	44.05	■■■■■ 4.64
TXNRD2-204	ENST00000400521	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	43.97	■■■■■ 4.63
TXNRD2-204	ENST00000400521	PPARGC1B	Q86YN6	1023 aa	Known RBP	43.73	■■■■■ 4.59
TXNRD2-204	ENST00000400521	EIF4G1	Q04637	1599 aa	Known RBP	43.69	■■■■■ 4.58
TXNRD2-204	ENST00000400521	FAM9A	Q8IZU1	332 aa	Predicted RBP	43.64	■■■■■ 4.58
TXNRD2-204	ENST00000400521	UNC13A	Q9UPW8	1703 aa		43.52	■■■■■ 4.56
TXNRD2-204	ENST00000400521	TOP2A	P11388	1531 aa	Known RBP	43.51	■■■■■ 4.56
TXNRD2-204	ENST00000400521	SMARCA4	P51532	1647 aa		43.49	■■■■■ 4.55
TXNRD2-204	ENST00000400521	ZEB1	P37275	1124 aa	Predicted RBP	43.24	■■■■■ 4.51
TXNRD2-204	ENST00000400521	SMARCA2	P51531	1590 aa		43.22	■■■■■ 4.51
TXNRD2-204	ENST00000400521	CCDC88B	A6NC98	1476 aa		43.16	■■■■■ 4.5
TXNRD2-204	ENST00000400521	EHMT2	Q96KQ7	1210 aa		43.1	■■■■■ 4.49
TXNRD2-204	ENST00000400521	ABCC8	Q09428	1581 aa		43.01	■■■■■ 4.48
TXNRD2-204	ENST00000400521	BICRA	Q9NZM4	1560 aa		42.88	■■■■■ 4.45
TXNRD2-204	ENST00000400521	PEG3	Q9GZU2	1588 aa		42.76	■■■■■ 4.44
TXNRD2-204	ENST00000400521	EEA1	Q15075	1411 aa		42.66	■■■■■ 4.42
TXNRD2-204	ENST00000400521	WRN	Q14191	1432 aa	Predicted RBP eCLIP	42.61	■■■■■ 4.41
TXNRD2-204	ENST00000400521	SOGA1	O94964	1423 aa		42.56	■■■■■ 4.4
TXNRD2-204	ENST00000400521	CEP162	Q5TB80	1403 aa		42.5	■■■■■ 4.39
TXNRD2-204	ENST00000400521	PABPN1	Q86U42	306 aa	Known RBP eCLIP	42.49	■■■■■ 4.39	7e-7	■■■■□ 25.6
TXNRD2-204	ENST00000400521	TNIK	Q9UKE5	1360 aa		42.49	■■■■■ 4.39
TXNRD2-204	ENST00000400521	CSRNP3	Q8WYN3	585 aa		42.33	■■■■■ 4.37
TXNRD2-204	ENST00000400521	RUSC2	Q8N2Y8	1516 aa		42.32	■■■■■ 4.36
TXNRD2-204	ENST00000400521	GOLGA3	Q08378	1498 aa		42.28	■■■■■ 4.36
TXNRD2-204	ENST00000400521	ATAD2B	Q9ULI0	1458 aa		42.25	■■■■■ 4.35
TXNRD2-204	ENST00000400521	SYNJ1	O43426	1573 aa		42.19	■■■■■ 4.34
TXNRD2-204	ENST00000400521	BAZ1B	Q9UIG0	1483 aa	Known RBP	42.16	■■■■■ 4.34
TXNRD2-204	ENST00000400521	KIF21B	O75037	1637 aa		42.11	■■■■■ 4.33
TXNRD2-204	ENST00000400521	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	42.07	■■■■■ 4.33
TXNRD2-204	ENST00000400521	UBTF	P17480	764 aa	Known RBP	42.05	■■■■■ 4.32
TXNRD2-204	ENST00000400521	CCER1	Q8TC90	406 aa	Predicted RBP	42.05	■■■■■ 4.32
TXNRD2-204	ENST00000400521	CEP164	Q9UPV0	1460 aa		42.04	■■■■■ 4.32
TXNRD2-204	ENST00000400521	TTBK1	Q5TCY1	1321 aa	Predicted RBP	41.8	■■■■■ 4.28
TXNRD2-204	ENST00000400521	TOP2B	Q02880	1626 aa		41.77	■■■■■ 4.28
TXNRD2-204	ENST00000400521	CLIP1	P30622	1438 aa		41.7	■■■■■ 4.27
TXNRD2-204	ENST00000400521	BIVM-ERCC5	R4GMW8	1640 aa		41.69	■■■■■ 4.26
TXNRD2-204	ENST00000400521	HMGXB3	Q12766	1538 aa		41.6	■■■■■ 4.25
TXNRD2-204	ENST00000400521	VPS8	Q8N3P4	1428 aa		41.59	■■■■■ 4.25
TXNRD2-204	ENST00000400521	RAPGEF2	Q9Y4G8	1499 aa		41.58	■■■■■ 4.25
TXNRD2-204	ENST00000400521	NCAPD3	P42695	1498 aa		41.47	■■■■■ 4.23
TXNRD2-204	ENST00000400521	ERICH3	Q5RHP9	1530 aa		41.42	■■■■■ 4.22
TXNRD2-204	ENST00000400521	SCAF1	Q9H7N4	1312 aa	Known RBP	41.32	■■■■■ 4.21
TXNRD2-204	ENST00000400521	PRX	Q9BXM0	1461 aa		41.29	■■■■■ 4.2
TXNRD2-204	ENST00000400521	DIEXF	Q68CQ4	756 aa	Known RBP	41.29	■■■■■ 4.2
TXNRD2-204	ENST00000400521	CUX1	P39880	1505 aa		41.24	■■■■■ 4.19
TXNRD2-204	ENST00000400521	APLP2	Q06481	763 aa		41.23	■■■■■ 4.19
TXNRD2-204	ENST00000400521	CFTR	P13569	1480 aa		41.14	■■■■■ 4.18
TXNRD2-204	ENST00000400521	PRDM2	Q13029	1718 aa		41.11	■■■■■ 4.17
TXNRD2-204	ENST00000400521	HNRNPUL2	Q1KMD3	747 aa	Known RBP	41.1	■■■■■ 4.17
TXNRD2-204	ENST00000400521	ARAP1	Q96P48	1450 aa		41.08	■■■■■ 4.17
TXNRD2-204	ENST00000400521	KIF27	Q86VH2	1401 aa		41.06	■■■■■ 4.16
TXNRD2-204	ENST00000400521	ZNF316	A6NFI3	1004 aa	Predicted RBP	41.05	■■■■■ 4.16
TXNRD2-204	ENST00000400521	ACIN1	Q9UKV3	1341 aa	Known RBP	41.03	■■■■■ 4.16
TXNRD2-204	ENST00000400521	RANGAP1	P46060	587 aa	Predicted RBP	40.97	■■■■■ 4.15
TXNRD2-204	ENST00000400521	CENPB	P07199	599 aa	Predicted RBP	40.87	■■■■■ 4.13
TXNRD2-204	ENST00000400521	NEUROD1	Q13562	356 aa		40.86	■■■■■ 4.13
TXNRD2-204	ENST00000400521	PELP1	Q8IZL8	1130 aa	Known RBP	40.79	■■■■■ 4.12
TXNRD2-204	ENST00000400521	ARHGAP35	Q9NRY4	1499 aa		40.69	■■■■■ 4.1
TXNRD2-204	ENST00000400521	CLSPN	Q9HAW4	1339 aa		40.67	■■■■■ 4.1
TXNRD2-204	ENST00000400521	RRBP1	Q9P2E9	1410 aa	Known RBP	40.66	■■■■■ 4.1
TXNRD2-204	ENST00000400521	KANK4	Q5T7N3	995 aa	Predicted RBP	40.61	■■■■■ 4.09
TXNRD2-204	ENST00000400521	CUX2	O14529	1486 aa		40.59	■■■■■ 4.09
TXNRD2-204	ENST00000400521	CADPS	Q9ULU8	1353 aa		40.59	■■■■■ 4.09
TXNRD2-204	ENST00000400521	DHX57	Q6P158	1386 aa	Known RBP	40.55	■■■■■ 4.08
TXNRD2-204	ENST00000400521	IGF1R	P08069	1367 aa		40.51	■■■■■ 4.08
TXNRD2-204	ENST00000400521	FGD5	Q6ZNL6	1462 aa		40.48	■■■■■ 4.07
TXNRD2-204	ENST00000400521	GTF3C3	Q9Y5Q9	886 aa		40.45	■■■■■ 4.07
TXNRD2-204	ENST00000400521	MAP3K1	Q13233	1512 aa		40.42	■■■■■ 4.06
TXNRD2-204	ENST00000400521	CCNB3	Q8WWL7	1395 aa		40.39	■■■■■ 4.06
TXNRD2-204	ENST00000400521	TIAM1	Q13009	1591 aa		40.36	■■■■■ 4.05
TXNRD2-204	ENST00000400521	CARMIL1	Q5VZK9	1371 aa		40.35	■■■■■ 4.05
TXNRD2-204	ENST00000400521	CC2D2A	Q9P2K1	1620 aa		40.34	■■■■■ 4.05
TXNRD2-204	ENST00000400521	MIER1	Q8N108	512 aa		40.33	■■■■■ 4.05
TXNRD2-204	ENST00000400521	FANCD2	Q9BXW9	1451 aa		40.23	■■■■■ 4.03
TXNRD2-204	ENST00000400521	DNMBP	Q6XZF7	1577 aa		40.2	■■■■■ 4.03
TXNRD2-204	ENST00000400521	CFAP43	Q8NDM7	1665 aa		40.18	■■■■■ 4.02
TXNRD2-204	ENST00000400521	YTHDC1	Q96MU7	727 aa	Known RBP	40.14	■■■■■ 4.02
TXNRD2-204	ENST00000400521	FHAD1	B1AJZ9	1412 aa		40.13	■■■■■ 4.02
TXNRD2-204	ENST00000400521	LRRC9	Q6ZRR7	1453 aa		40.13	■■■■■ 4.02

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms