RNA–Protein interactions for RNA: ENST00000355849.9

KHDRBS3-201, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDRBS3, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-201ENST00000355849 NISCHQ9Y2I1 1504 aa60.89■■■■■ 7.34
KHDRBS3-201ENST00000355849 CCDC180Q9P1Z9 1646 aa52.77■■■■■ 6.04
KHDRBS3-201ENST00000355849 ZCCHC6Q5VYS8 1495 aaKnown RBP51.22■■■■■ 5.79
KHDRBS3-201ENST00000355849 DCAF8L2P0C7V8 631 aa50.37■■■■■ 5.65
KHDRBS3-201ENST00000355849 DCAF1Q9Y4B6 1507 aa50.27■■■■■ 5.64
KHDRBS3-201ENST00000355849 SHROOM4Q9ULL8 1493 aa50.15■■■■■ 5.62
KHDRBS3-201ENST00000355849 ABCC9O60706 1549 aa49.74■■■■■ 5.55
KHDRBS3-201ENST00000355849 MYO15BQ96JP2 1530 aa49.5■■■■■ 5.51
KHDRBS3-201ENST00000355849 NACADO15069 1562 aa49.12■■■■■ 5.45
KHDRBS3-201ENST00000355849 SCRIBQ14160 1630 aa48.74■■■■■ 5.39
KHDRBS3-201ENST00000355849 RB1CC1Q8TDY2 1594 aa48.62■■■■■ 5.37
KHDRBS3-201ENST00000355849 SUPT5HO00267 1087 aaKnown RBP48.48■■■■■ 5.35
KHDRBS3-201ENST00000355849 UNC13AQ9UPW8 1703 aa47.56■■■■■ 5.2
KHDRBS3-201ENST00000355849 RSF1Q96T23 1441 aaPredicted RBP47.45■■■■■ 5.19
KHDRBS3-201ENST00000355849 CECR2Q9BXF3 1484 aa47.34■■■■■ 5.17
KHDRBS3-201ENST00000355849 BICRAQ9NZM4 1560 aa47.14■■■■■ 5.14
KHDRBS3-201ENST00000355849 MROH2BQ7Z745 1585 aa47.09■■■■■ 5.13
KHDRBS3-201ENST00000355849 PABPN1Q86U42 306 aaKnown RBP eCLIP47.06■■■■■ 5.12
KHDRBS3-201ENST00000355849 BAZ1AQ9NRL2 1556 aaPredicted RBP46.97■■■■■ 5.11
KHDRBS3-201ENST00000355849 WIZO95785 1651 aa46.7■■■■■ 5.07
KHDRBS3-201ENST00000355849 SMARCA4P51532 1647 aa46.69■■■■■ 5.07
KHDRBS3-201ENST00000355849 CHIC1Q5VXU3 224 aa46.56■■■■■ 5.04
KHDRBS3-201ENST00000355849 TOP2AP11388 1531 aaKnown RBP46.22■■■■■ 4.99
KHDRBS3-201ENST00000355849 PEG3Q9GZU2 1588 aa46.06■■■■■ 4.96
KHDRBS3-201ENST00000355849 ATAD2BQ9ULI0 1458 aa45.87■■■■■ 4.93
KHDRBS3-201ENST00000355849 SMARCA2P51531 1590 aa45.82■■■■■ 4.93
KHDRBS3-201ENST00000355849 CCDC88BA6NC98 1476 aa45.81■■■■■ 4.92
KHDRBS3-201ENST00000355849 EIF4G1Q04637 1599 aaKnown RBP45.71■■■■■ 4.91
KHDRBS3-201ENST00000355849 BAZ1BQ9UIG0 1483 aaKnown RBP45.65■■■■■ 4.9
KHDRBS3-201ENST00000355849 TRIM41Q8WV44 630 aa45.51■■■■■ 4.88
KHDRBS3-201ENST00000355849 NCAPD3P42695 1498 aa45.37■■■■■ 4.85
KHDRBS3-201ENST00000355849 HMGXB3Q12766 1538 aa45.31■■■■■ 4.84
KHDRBS3-201ENST00000355849 ABCC8Q09428 1581 aa44.99■■■■■ 4.79
KHDRBS3-201ENST00000355849 CC2D2AQ9P2K1 1620 aa44.93■■■■■ 4.78
KHDRBS3-201ENST00000355849 LOC105371045A0A1W2PR82 267 aa44.85■■■■■ 4.77
KHDRBS3-201ENST00000355849 FAM9AQ8IZU1 332 aaPredicted RBP44.76■■■■■ 4.76
KHDRBS3-201ENST00000355849 WRNQ14191 1432 aaPredicted RBP eCLIP44.66■■■■■ 4.74
KHDRBS3-201ENST00000355849 CFTRP13569 1480 aa44.5■■■■■ 4.71
KHDRBS3-201ENST00000355849 SYNJ1O43426 1573 aa44.41■■■■■ 4.7
KHDRBS3-201ENST00000355849 CADPSQ9ULU8 1353 aa44.29■■■■■ 4.68
KHDRBS3-201ENST00000355849 SOGA1O94964 1423 aa44.27■■■■■ 4.68
KHDRBS3-201ENST00000355849 EEA1Q15075 1411 aa44.2■■■■■ 4.67
KHDRBS3-201ENST00000355849 TOP2BQ02880 1626 aa44.17■■■■■ 4.66
KHDRBS3-201ENST00000355849 EHMT2Q96KQ7 1210 aa44.16■■■■■ 4.66
KHDRBS3-201ENST00000355849 PRDM2Q13029 1718 aa44.14■■■■■ 4.66
KHDRBS3-201ENST00000355849 BIVM-ERCC5R4GMW8 1640 aa44.08■■■■■ 4.65
KHDRBS3-201ENST00000355849 RUSC2Q8N2Y8 1516 aa44.06■■■■■ 4.64
KHDRBS3-201ENST00000355849 CSRNP3Q8WYN3 585 aa44.01■■■■■ 4.64
KHDRBS3-201ENST00000355849 CUX1P39880 1505 aa43.99■■■■■ 4.63
KHDRBS3-201ENST00000355849 FANCD2Q9BXW9 1451 aa43.81■■■■■ 4.6
KHDRBS3-201ENST00000355849 DNAJC5BQ9UF47 199 aa43.8■■■■■ 4.6
KHDRBS3-201ENST00000355849 NESP48681 1621 aa43.78■■■■■ 4.6
KHDRBS3-201ENST00000355849 LAMC3Q9Y6N6 1575 aa43.73■■■■■ 4.59
KHDRBS3-201ENST00000355849 GOLGA3Q08378 1498 aa43.64■■■■■ 4.58
KHDRBS3-201ENST00000355849 CEP164Q9UPV0 1460 aa43.6■■■■■ 4.57
KHDRBS3-201ENST00000355849 TNIKQ9UKE5 1360 aa43.6■■■■■ 4.57
KHDRBS3-201ENST00000355849 KIF21BO75037 1637 aa43.57■■■■■ 4.56
KHDRBS3-201ENST00000355849 UBTFP17480 764 aaKnown RBP43.54■■■■■ 4.56
KHDRBS3-201ENST00000355849 KIF27Q86VH2 1401 aa43.49■■■■■ 4.55
KHDRBS3-201ENST00000355849 FGD5Q6ZNL6 1462 aa43.47■■■■■ 4.55
KHDRBS3-201ENST00000355849 PDS5BQ9NTI5 1447 aa43.45■■■■■ 4.55
KHDRBS3-201ENST00000355849 DNMBPQ6XZF7 1577 aa43.44■■■■■ 4.54
KHDRBS3-201ENST00000355849 CEP162Q5TB80 1403 aa43.41■■■■■ 4.54
KHDRBS3-201ENST00000355849 TOPBP1Q92547 1522 aa43.36■■■■■ 4.53
KHDRBS3-201ENST00000355849 RAPGEF2Q9Y4G8 1499 aa43.33■■■■■ 4.53
KHDRBS3-201ENST00000355849 CUX2O14529 1486 aa43.3■■■■■ 4.52
KHDRBS3-201ENST00000355849 HRCP23327 699 aa43.29■■■■■ 4.52
KHDRBS3-201ENST00000355849 PRXQ9BXM0 1461 aa43.27■■■■■ 4.52
KHDRBS3-201ENST00000355849 PCGF6Q9BYE7 350 aa43.25■■■■■ 4.51
KHDRBS3-201ENST00000355849 URB2Q14146 1524 aaKnown RBP43.22■■■■■ 4.51
KHDRBS3-201ENST00000355849 ERICH3Q5RHP9 1530 aa43.21■■■■■ 4.51
KHDRBS3-201ENST00000355849 POLA1P09884 1462 aaPredicted RBP43.19■■■■■ 4.5
KHDRBS3-201ENST00000355849 KIF21AQ7Z4S6 1674 aa43.16■■■■■ 4.5
KHDRBS3-201ENST00000355849 TRIM26Q12899 539 aaPredicted RBP43.1■■■■■ 4.49
KHDRBS3-201ENST00000355849 RAD54L2Q9Y4B4 1467 aa43.1■■■■■ 4.49
KHDRBS3-201ENST00000355849 IGF1RP08069 1367 aa43.07■■■■■ 4.49
KHDRBS3-201ENST00000355849 ABCA10Q8WWZ4 1543 aa43.06■■■■■ 4.48
KHDRBS3-201ENST00000355849 CLIP1P30622 1438 aa42.99■■■■■ 4.47
KHDRBS3-201ENST00000355849 CARMIL1Q5VZK9 1371 aa42.88■■■■■ 4.45
KHDRBS3-201ENST00000355849 MRC2Q9UBG0 1479 aa42.86■■■■■ 4.45
KHDRBS3-201ENST00000355849 WDR97A6NE52 1622 aa42.79■■■■■ 4.44
KHDRBS3-201ENST00000355849 RANGAP1P46060 587 aaPredicted RBP42.77■■■■■ 4.44
KHDRBS3-201ENST00000355849 PPARGC1BQ86YN6 1023 aaKnown RBP42.77■■■■■ 4.44
KHDRBS3-201ENST00000355849 TDRD9Q8NDG6 1382 aaKnown RBP42.67■■■■■ 4.42
KHDRBS3-201ENST00000355849 VPS8Q8N3P4 1428 aa42.65■■■■■ 4.42
KHDRBS3-201ENST00000355849 ABCA5Q8WWZ7 1642 aa42.63■■■■■ 4.42
KHDRBS3-201ENST00000355849 TARBP1Q13395 1621 aaKnown RBP42.62■■■■■ 4.41
KHDRBS3-201ENST00000355849 ERCC6Q03468 1493 aa42.61■■■■■ 4.41
KHDRBS3-201ENST00000355849 GAPVD1Q14C86 1478 aa42.6■■■■■ 4.41
KHDRBS3-201ENST00000355849 CUL7Q14999 1698 aa42.6■■■■■ 4.41
KHDRBS3-201ENST00000355849 WDR62O43379 1518 aa42.57■■■■■ 4.41
KHDRBS3-201ENST00000355849 ARAP1Q96P48 1450 aa42.48■■■■■ 4.39
KHDRBS3-201ENST00000355849 IFT140Q96RY7 1462 aa42.4■■■■■ 4.38
KHDRBS3-201ENST00000355849 ARHGAP35Q9NRY4 1499 aa42.39■■■■■ 4.38
KHDRBS3-201ENST00000355849 TTBK1Q5TCY1 1321 aaPredicted RBP42.37■■■■■ 4.37
KHDRBS3-201ENST00000355849 APLP2Q06481 763 aa42.34■■■■■ 4.37
KHDRBS3-201ENST00000355849 THOC2Q8NI27 1593 aaKnown RBP42.33■■■■■ 4.37
KHDRBS3-201ENST00000355849 AQRO60306 1485 aaKnown RBP eCLIP42.3■■■■■ 4.36
KHDRBS3-201ENST00000355849 PBRM1Q86U86 1689 aa42.23■■■■■ 4.35
KHDRBS3-201ENST00000355849 GRIN2BQ13224 1484 aa42.2■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms