RNA–Protein interactions for RNA: ENST00000535979.5

CDK2AP1-203, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-203ENST00000535979 NISCHQ9Y2I1 1504 aa69.41■■■■■ 8.7
CDK2AP1-203ENST00000535979 CCDC180Q9P1Z9 1646 aa62.14■■■■■ 7.54
CDK2AP1-203ENST00000535979 ABCC9O60706 1549 aa61.29■■■■■ 7.4
CDK2AP1-203ENST00000535979 RB1CC1Q8TDY2 1594 aa58.79■■■■■ 7
CDK2AP1-203ENST00000535979 NACADO15069 1562 aa58.54■■■■■ 6.96
CDK2AP1-203ENST00000535979 DCAF8L2P0C7V8 631 aa58.19■■■■■ 6.91
CDK2AP1-203ENST00000535979 MYO15BQ96JP2 1530 aa57.97■■■■■ 6.87
CDK2AP1-203ENST00000535979 ZCCHC6Q5VYS8 1495 aaKnown RBP57.67■■■■■ 6.82
CDK2AP1-203ENST00000535979 UNC13AQ9UPW8 1703 aa57.48■■■■■ 6.79
CDK2AP1-203ENST00000535979 DCAF1Q9Y4B6 1507 aa57.46■■■■■ 6.79
CDK2AP1-203ENST00000535979 PABPN1Q86U42 306 aaKnown RBP eCLIP57.1■■■■■ 6.73
CDK2AP1-203ENST00000535979 BICRAQ9NZM4 1560 aa56.95■■■■■ 6.71
CDK2AP1-203ENST00000535979 DNAJC5BQ9UF47 199 aa56.79■■■■■ 6.68
CDK2AP1-203ENST00000535979 SCRIBQ14160 1630 aa56.53■■■■■ 6.64
CDK2AP1-203ENST00000535979 SHROOM4Q9ULL8 1493 aa56.4■■■■■ 6.62
CDK2AP1-203ENST00000535979 EIF4G1Q04637 1599 aaKnown RBP55.53■■■■■ 6.48
CDK2AP1-203ENST00000535979 CC2D2AQ9P2K1 1620 aa55.49■■■■■ 6.47
CDK2AP1-203ENST00000535979 CECR2Q9BXF3 1484 aa55.18■■■■■ 6.42
CDK2AP1-203ENST00000535979 SMARCA4P51532 1647 aa54.04■■■■■ 6.24
CDK2AP1-203ENST00000535979 NCAPD3P42695 1498 aa53.96■■■■■ 6.23
CDK2AP1-203ENST00000535979 BAZ1AQ9NRL2 1556 aaPredicted RBP53.9■■■■■ 6.22
CDK2AP1-203ENST00000535979 ATAD2BQ9ULI0 1458 aa53.87■■■■■ 6.21
CDK2AP1-203ENST00000535979 SMARCA2P51531 1590 aa53.85■■■■■ 6.21
CDK2AP1-203ENST00000535979 HMGXB3Q12766 1538 aa53.69■■■■■ 6.19
CDK2AP1-203ENST00000535979 PEG3Q9GZU2 1588 aa53.54■■■■■ 6.16
CDK2AP1-203ENST00000535979 MROH2BQ7Z745 1585 aa53.44■■■■■ 6.14
CDK2AP1-203ENST00000535979 BAZ1BQ9UIG0 1483 aaKnown RBP53.43■■■■■ 6.14
CDK2AP1-203ENST00000535979 ERCC6Q03468 1493 aa52.95■■■■■ 6.07
CDK2AP1-203ENST00000535979 WIZO95785 1651 aa52.88■■■■■ 6.06
CDK2AP1-203ENST00000535979 NESP48681 1621 aa52.82■■■■■ 6.05
CDK2AP1-203ENST00000535979 LAMC3Q9Y6N6 1575 aa52.72■■■■■ 6.03
CDK2AP1-203ENST00000535979 CUX2O14529 1486 aa52.67■■■■■ 6.02
CDK2AP1-203ENST00000535979 RSF1Q96T23 1441 aaPredicted RBP52.57■■■■■ 6.01
CDK2AP1-203ENST00000535979 PDS5BQ9NTI5 1447 aa52.36■■■■■ 5.97
CDK2AP1-203ENST00000535979 CADPSQ9ULU8 1353 aa52.34■■■■■ 5.97
CDK2AP1-203ENST00000535979 KIF21AQ7Z4S6 1674 aa52.3■■■■■ 5.96
CDK2AP1-203ENST00000535979 TOP2AP11388 1531 aaKnown RBP52.29■■■■■ 5.96
CDK2AP1-203ENST00000535979 THOC2Q8NI27 1593 aaKnown RBP52.26■■■■■ 5.96
CDK2AP1-203ENST00000535979 CFTRP13569 1480 aa51.9■■■■■ 5.9
CDK2AP1-203ENST00000535979 MRC2Q9UBG0 1479 aa51.84■■■■■ 5.89
CDK2AP1-203ENST00000535979 DNAJC5Q9H3Z4 198 aa51.79■■■■■ 5.88
CDK2AP1-203ENST00000535979 CEP164Q9UPV0 1460 aa51.78■■■■■ 5.88
CDK2AP1-203ENST00000535979 FANCD2Q9BXW9 1451 aa51.75■■■■■ 5.88
CDK2AP1-203ENST00000535979 WDR62O43379 1518 aa51.71■■■■■ 5.87
CDK2AP1-203ENST00000535979 CCDC88BA6NC98 1476 aa51.63■■■■■ 5.86
CDK2AP1-203ENST00000535979 PRDM2Q13029 1718 aa51.63■■■■■ 5.86
CDK2AP1-203ENST00000535979 URB2Q14146 1524 aaKnown RBP51.25■■■■■ 5.79
CDK2AP1-203ENST00000535979 ABCC8Q09428 1581 aa50.89■■■■■ 5.74
CDK2AP1-203ENST00000535979 TOPBP1Q92547 1522 aa50.85■■■■■ 5.73
CDK2AP1-203ENST00000535979 DNMBPQ6XZF7 1577 aa50.77■■■■■ 5.72
CDK2AP1-203ENST00000535979 IFT140Q96RY7 1462 aa50.72■■■■■ 5.71
CDK2AP1-203ENST00000535979 SUPT5HO00267 1087 aaKnown RBP50.67■■■■■ 5.7
CDK2AP1-203ENST00000535979 ZNF608Q9ULD9 1512 aaPredicted RBP50.48■■■■■ 5.67
CDK2AP1-203ENST00000535979 TARBP1Q13395 1621 aaKnown RBP50.38■■■■■ 5.66
CDK2AP1-203ENST00000535979 POLA1P09884 1462 aaPredicted RBP50.36■■■■■ 5.65
CDK2AP1-203ENST00000535979 EIF4G3O43432 1585 aaKnown RBP50.34■■■■■ 5.65
CDK2AP1-203ENST00000535979 OSCARQ8IYS5 282 aa50.31■■■■■ 5.64
CDK2AP1-203ENST00000535979 CUX1P39880 1505 aa50.2■■■■■ 5.63
CDK2AP1-203ENST00000535979 SOGA1O94964 1423 aa50.14■■■■■ 5.62
CDK2AP1-203ENST00000535979 FGD5Q6ZNL6 1462 aa50.14■■■■■ 5.62
CDK2AP1-203ENST00000535979 AQRO60306 1485 aaKnown RBP eCLIP50.11■■■■■ 5.61
CDK2AP1-203ENST00000535979 RAD54L2Q9Y4B4 1467 aa50.1■■■■■ 5.61
CDK2AP1-203ENST00000535979 WDR97A6NE52 1622 aa50.03■■■■■ 5.6
CDK2AP1-203ENST00000535979 TDRD9Q8NDG6 1382 aaKnown RBP49.9■■■■■ 5.58
CDK2AP1-203ENST00000535979 CHD1O14646 1710 aa49.88■■■■■ 5.57
CDK2AP1-203ENST00000535979 TRIM41Q8WV44 630 aa49.74■■■■■ 5.55
CDK2AP1-203ENST00000535979 GRIN2BQ13224 1484 aa49.67■■■■■ 5.54
CDK2AP1-203ENST00000535979 SNAPC4Q5SXM2 1469 aa49.67■■■■■ 5.54
CDK2AP1-203ENST00000535979 BIVM-ERCC5R4GMW8 1640 aa49.67■■■■■ 5.54
CDK2AP1-203ENST00000535979 FBLN2P98095 1184 aa49.65■■■■■ 5.54
CDK2AP1-203ENST00000535979 ABCA10Q8WWZ4 1543 aa49.65■■■■■ 5.54
CDK2AP1-203ENST00000535979 TOP2BQ02880 1626 aa49.64■■■■■ 5.54
CDK2AP1-203ENST00000535979 MAGI1Q96QZ7 1491 aaPredicted RBP49.63■■■■■ 5.54
CDK2AP1-203ENST00000535979 WRNQ14191 1432 aaPredicted RBP eCLIP49.62■■■■■ 5.53
CDK2AP1-203ENST00000535979 RIMBP3CA6NJZ7 1639 aa49.62■■■■■ 5.53
CDK2AP1-203ENST00000535979 RIMBP3BA6NNM3 1639 aa49.62■■■■■ 5.53
CDK2AP1-203ENST00000535979 RIMBP3Q9UFD9 1639 aa49.62■■■■■ 5.53
CDK2AP1-203ENST00000535979 PBRM1Q86U86 1689 aa49.6■■■■■ 5.53
CDK2AP1-203ENST00000535979 GAPVD1Q14C86 1478 aa49.57■■■■■ 5.53
CDK2AP1-203ENST00000535979 SYNJ1O43426 1573 aa49.54■■■■■ 5.52
CDK2AP1-203ENST00000535979 ABCA5Q8WWZ7 1642 aa49.53■■■■■ 5.52
CDK2AP1-203ENST00000535979 ARHGEF11O15085 1522 aa49.51■■■■■ 5.52
CDK2AP1-203ENST00000535979 CHMP7Q8WUX9 453 aaPredicted RBP49.44■■■■■ 5.51
CDK2AP1-203ENST00000535979 SYNJ2O15056 1496 aa49.44■■■■■ 5.5
CDK2AP1-203ENST00000535979 CLASP1Q7Z460 1538 aa49.27■■■■■ 5.48
CDK2AP1-203ENST00000535979 ADAMTS12P58397 1594 aa49.11■■■■■ 5.45
CDK2AP1-203ENST00000535979 ERICH3Q5RHP9 1530 aa49.08■■■■■ 5.45
CDK2AP1-203ENST00000535979 CYB5RLQ6IPT4 315 aa49.04■■■■■ 5.44
CDK2AP1-203ENST00000535979 ARAP1Q96P48 1450 aa49.04■■■■■ 5.44
CDK2AP1-203ENST00000535979 GRIN2AQ12879 1464 aa49.02■■■■■ 5.44
CDK2AP1-203ENST00000535979 FHAD1B1AJZ9 1412 aa48.97■■■■■ 5.43
CDK2AP1-203ENST00000535979 NUP160Q12769 1436 aa48.82■■■■■ 5.41
CDK2AP1-203ENST00000535979 CEP170Q5SW79 1584 aa48.8■■■■■ 5.4
CDK2AP1-203ENST00000535979 KIF27Q86VH2 1401 aa48.66■■■■■ 5.38
CDK2AP1-203ENST00000535979 SHROOM2Q13796 1616 aa48.59■■■■■ 5.37
CDK2AP1-203ENST00000535979 CUL7Q14999 1698 aa48.55■■■■■ 5.36
CDK2AP1-203ENST00000535979 IGF1RP08069 1367 aa48.5■■■■■ 5.35
CDK2AP1-203ENST00000535979 ERCC6L2Q5T890 1561 aa48.47■■■■■ 5.35
CDK2AP1-203ENST00000535979 RUSC2Q8N2Y8 1516 aa48.4■■■■■ 5.34
CDK2AP1-203ENST00000535979 TRHP20396 242 aaPredicted RBP48.3■■■■■ 5.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms