RNA–Protein interactions for RNA: ENST00000318560.5

ABL1-201, Transcript of ABL proto-oncogene 1, non-receptor tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene ABL1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABL1-201ENST00000318560 DCAF8L2P0C7V8 631 aa45.35■■■■■ 4.85
ABL1-201ENST00000318560 SUPT5HO00267 1087 aaKnown RBP42.24■■■■■ 4.35
ABL1-201ENST00000318560 EHMT2Q96KQ7 1210 aa41.31■■■■■ 4.2
ABL1-201ENST00000318560 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
ABL1-201ENST00000318560 APLP2Q06481 763 aa41■■■■■ 4.15
ABL1-201ENST00000318560 FAM9AQ8IZU1 332 aaPredicted RBP40.97■■■■■ 4.15
ABL1-201ENST00000318560 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
ABL1-201ENST00000318560 PELP1Q8IZL8 1130 aaKnown RBP40.71■■■■■ 4.11
ABL1-201ENST00000318560 TTBK1Q5TCY1 1321 aaPredicted RBP39.86■■■■□ 3.97
ABL1-201ENST00000318560 RANGAP1P46060 587 aaPredicted RBP39.72■■■■□ 3.95
ABL1-201ENST00000318560 ATP1B4Q9UN42 357 aaPredicted RBP39.67■■■■□ 3.94
ABL1-201ENST00000318560 PCGF6Q9BYE7 350 aa39.29■■■■□ 3.88
ABL1-201ENST00000318560 TRIM41Q8WV44 630 aa39.15■■■■□ 3.86
ABL1-201ENST00000318560 UBTFP17480 764 aaKnown RBP39.04■■■■□ 3.84
ABL1-201ENST00000318560 ERICH6Q7L0X2 663 aa39■■■■□ 3.83
ABL1-201ENST00000318560 CCER1Q8TC90 406 aaPredicted RBP38.97■■■■□ 3.83
ABL1-201ENST00000318560 CENPBP07199 599 aaPredicted RBP38.75■■■■□ 3.79
ABL1-201ENST00000318560 MYT1LQ9UL68 1186 aa38.66■■■■□ 3.78
ABL1-201ENST00000318560 ZEB1P37275 1124 aaPredicted RBP38.63■■■■□ 3.77
ABL1-201ENST00000318560 NEFLP07196 543 aa38.42■■■■□ 3.74
ABL1-201ENST00000318560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.39■■■■□ 3.74
ABL1-201ENST00000318560 HNRNPUL2Q1KMD3 747 aaKnown RBP38.39■■■■□ 3.74
ABL1-201ENST00000318560 POLR3GLQ9BT43 218 aa37.94■■■■□ 3.66
ABL1-201ENST00000318560 YTHDC1Q96MU7 727 aaKnown RBP37.94■■■■□ 3.66
ABL1-201ENST00000318560 PPARGC1BQ86YN6 1023 aaKnown RBP37.87■■■■□ 3.65
ABL1-201ENST00000318560 ITGAEP38570 1179 aa37.87■■■■□ 3.65
ABL1-201ENST00000318560 CHIC1Q5VXU3 224 aa37.81■■■■□ 3.64
ABL1-201ENST00000318560 DAXXQ9UER7 740 aaPredicted RBP37.62■■■■□ 3.61
ABL1-201ENST00000318560 SLC4A1APQ9BWU0 796 aaKnown RBP37.58■■■■□ 3.61
ABL1-201ENST00000318560 CNGB1Q14028 1251 aaPredicted RBP37.42■■■■□ 3.58
ABL1-201ENST00000318560 TRIM26Q12899 539 aaPredicted RBP37.25■■■■□ 3.55
ABL1-201ENST00000318560 CLSPNQ9HAW4 1339 aa36.87■■■■□ 3.49
ABL1-201ENST00000318560 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
ABL1-201ENST00000318560 TRIM52Q96A61 297 aa36.85■■■■□ 3.49
ABL1-201ENST00000318560 PABPN1Q86U42 306 aaKnown RBP eCLIP36.77■■■■□ 3.48
ABL1-201ENST00000318560 FBLN2P98095 1184 aa36.76■■■■□ 3.48
ABL1-201ENST00000318560 LOC105371045A0A1W2PR82 267 aa36.75■■■■□ 3.47
ABL1-201ENST00000318560 HRCP23327 699 aa36.66■■■■□ 3.46
ABL1-201ENST00000318560 MYT1Q01538 1121 aa36.63■■■■□ 3.45
ABL1-201ENST00000318560 ZNF316A6NFI3 1004 aaPredicted RBP36.61■■■■□ 3.45
ABL1-201ENST00000318560 BCANQ96GW7 911 aa36.52■■■■□ 3.44
ABL1-201ENST00000318560 ABCC9O60706 1549 aa36.47■■■■□ 3.43
ABL1-201ENST00000318560 ZBTB47Q9UFB7 747 aaPredicted RBP36.46■■■■□ 3.43
ABL1-201ENST00000318560 ZNF326Q5BKZ1 582 aaKnown RBP36.45■■■■□ 3.43
ABL1-201ENST00000318560 SLC24A1O60721 1099 aa36.43■■■■□ 3.42
ABL1-201ENST00000318560 NEUROD1Q13562 356 aa36.38■■■■□ 3.42
ABL1-201ENST00000318560 RTL5Q5HYW3 569 aaPredicted RBP36.28■■■■□ 3.4
ABL1-201ENST00000318560 NEFMP07197 916 aa36.23■■■■□ 3.39
ABL1-201ENST00000318560 ESF1Q9H501 851 aaKnown RBP36.16■■■■□ 3.38
ABL1-201ENST00000318560 DIEXFQ68CQ4 756 aaKnown RBP36.04■■■■□ 3.36
ABL1-201ENST00000318560 ARID3CA6NKF2 412 aa36.01■■■■□ 3.36
ABL1-201ENST00000318560 CANXP27824 592 aaKnown RBP36■■■■□ 3.35
ABL1-201ENST00000318560 BCL11AQ9H165 835 aa36■■■■□ 3.35
ABL1-201ENST00000318560 ANP32CO43423 234 aa35.98■■■■□ 3.35
ABL1-201ENST00000318560 ZNF777Q9ULD5 760 aaPredicted RBP35.91■■■■□ 3.34
ABL1-201ENST00000318560 P3H3Q8IVL6 736 aa35.88■■■■□ 3.33
ABL1-201ENST00000318560 CDK11AQ9UQ88 783 aaPredicted RBP35.83■■■■□ 3.33
ABL1-201ENST00000318560 STAG3Q9UJ98 1225 aa35.81■■■■□ 3.32
ABL1-201ENST00000318560 NPM1P06748 294 aaKnown RBP eCLIP35.79■■■■□ 3.32
ABL1-201ENST00000318560 PLPPR3Q6T4P5 718 aa35.78■■■■□ 3.32
ABL1-201ENST00000318560 CHGAP10645 457 aaKnown RBP35.66■■■■□ 3.3
ABL1-201ENST00000318560 CSRNP3Q8WYN3 585 aa35.4■■■■□ 3.26
ABL1-201ENST00000318560 SCAF1Q9H7N4 1312 aaKnown RBP35.15■■■■□ 3.22
ABL1-201ENST00000318560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.11■■■■□ 3.218e-8■□□□□ 10.3
ABL1-201ENST00000318560 TONSLQ96HA7 1378 aa35.05■■■■□ 3.2
ABL1-201ENST00000318560 A0A0G2JS52 829 aa35.04■■■■□ 3.2
ABL1-201ENST00000318560 HSP90AA1P07900 732 aaKnown RBP35.04■■■■□ 3.2
ABL1-201ENST00000318560 ANP32AP39687 249 aaKnown RBP35.03■■■■□ 3.2
ABL1-201ENST00000318560 GTF3C3Q9Y5Q9 886 aa34.98■■■■□ 3.19
ABL1-201ENST00000318560 NPM2Q86SE8 214 aaKnown RBP34.97■■■■□ 3.19
ABL1-201ENST00000318560 TSPY4P0CV99 314 aa34.96■■■■□ 3.19
ABL1-201ENST00000318560 TSPY10P0CW01 314 aa34.96■■■■□ 3.19
ABL1-201ENST00000318560 CHMP7Q8WUX9 453 aaPredicted RBP34.9■■■■□ 3.18
ABL1-201ENST00000318560 UPF2Q9HAU5 1272 aaKnown RBP34.9■■■■□ 3.18
ABL1-201ENST00000318560 ANP32BQ92688 251 aaKnown RBP34.88■■■■□ 3.17
ABL1-201ENST00000318560 CHIC2Q9UKJ5 165 aa34.86■■■■□ 3.17
ABL1-201ENST00000318560 C14orf37Q86TY3 774 aa34.77■■■■□ 3.16
ABL1-201ENST00000318560 SALL2Q9Y467 1007 aaPredicted RBP34.76■■■■□ 3.16
ABL1-201ENST00000318560 PPP1R15AO75807 674 aaPredicted RBP34.75■■■■□ 3.15
ABL1-201ENST00000318560 SCRIBQ14160 1630 aa34.74■■■■□ 3.15
ABL1-201ENST00000318560 ZBTB7CA1YPR0 619 aa34.74■■■■□ 3.15
ABL1-201ENST00000318560 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.15
ABL1-201ENST00000318560 FAM9BQ8IZU0 186 aa34.72■■■■□ 3.15
ABL1-201ENST00000318560 PLEKHG5O94827 1062 aa34.71■■■■□ 3.15
ABL1-201ENST00000318560 KDM2AQ9Y2K7 1162 aa34.71■■■■□ 3.15
ABL1-201ENST00000318560 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.7■■■■□ 3.15
ABL1-201ENST00000318560 TMC1Q8TDI8 760 aa34.7■■■■□ 3.15
ABL1-201ENST00000318560 HNRNPUQ00839 825 aaKnown RBP eCLIP34.67■■■■□ 3.14
ABL1-201ENST00000318560 HAP1P54257 671 aaPredicted RBP34.62■■■■□ 3.13
ABL1-201ENST00000318560 KCNH8Q96L42 1107 aa34.58■■■■□ 3.13
ABL1-201ENST00000318560 MTUS2Q5JR59 1369 aa34.57■■■■□ 3.12
ABL1-201ENST00000318560 ARID4BQ4LE39 1312 aaPredicted RBP34.57■■■■□ 3.12
ABL1-201ENST00000318560 DDX10Q13206 875 aaKnown RBP34.55■■■■□ 3.12
ABL1-201ENST00000318560 SENP3Q9H4L4 574 aaPredicted RBP34.54■■■■□ 3.12
ABL1-201ENST00000318560 MYH16Q9H6N6 1097 aa34.52■■■■□ 3.12
ABL1-201ENST00000318560 CDK11BP21127 795 aaKnown RBP34.46■■■■□ 3.11
ABL1-201ENST00000318560 FKBP8Q14318 412 aa34.45■■■■□ 3.11
ABL1-201ENST00000318560 PLEKHD1A6NEE1 506 aa34.41■■■■□ 3.1
ABL1-201ENST00000318560 CCDC136Q96JN2 1154 aa34.36■■■■□ 3.09
ABL1-201ENST00000318560 MRS2Q9HD23 443 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms