Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 PHF23-207ENST00000573826 685 ntTSL 322.61■■□□□ 1.215e-8■■■■■ 33.3
XRN2Q9H0D6 SHANK2-215ENST00000470759 762 ntTSL 521.97■■□□□ 1.111e-6■■■■■ 33.3
XRN2Q9H0D6 DHRSX-205ENST00000444280 797 ntTSL 220.35■□□□□ 0.851e-6■■■■■ 33.3
XRN2Q9H0D6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.63■□□□□ 0.415e-8■■■■■ 33.3
XRN2Q9H0D6 PHF23-209ENST00000574323 575 ntTSL 416.52■□□□□ 0.245e-8■■■■■ 33.3
XRN2Q9H0D6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.071e-6■■■■■ 33.3
XRN2Q9H0D6 SHANK2-214ENST00000468619 2775 ntTSL 212.97□□□□□ -0.331e-6■■■■■ 33.3
XRN2Q9H0D6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.742e-10■■■■■ 33.3
XRN2Q9H0D6 KPNA4-202ENST00000469804 790 ntTSL 229.42■■■□□ 2.31e-6■■■■■ 33.2
XRN2Q9H0D6 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.493e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.19■□□□□ 0.53e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-214ENST00000513250 567 ntTSL 317.84■□□□□ 0.453e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.353e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-203ENST00000503151 627 ntTSL 316.23■□□□□ 0.193e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-210ENST00000508765 631 ntTSL 315.51■□□□□ 0.073e-6■■■■■ 33.2
XRN2Q9H0D6 CLPTM1L-202ENST00000503042 3540 ntTSL 211.48□□□□□ -0.573e-6■■■■■ 33.2
XRN2Q9H0D6 AL355987.4-202ENST00000459985 1900 ntTSL 224.35■■□□□ 1.494e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-206ENST00000484858 422 ntTSL 322.53■■□□□ 1.24e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-205ENST00000481601 1556 ntTSL 218.91■□□□□ 0.624e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-207ENST00000496839 744 ntTSL 517.95■□□□□ 0.464e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.444e-6■■■■■ 33.1
XRN2Q9H0D6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.71■□□□□ 0.434e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-204ENST00000479371 1786 ntTSL 1 (best)16.12■□□□□ 0.174e-6■■■■■ 33.1
XRN2Q9H0D6 CCDC183-203ENST00000430612 2321 ntTSL 214.37□□□□□ -0.114e-6■■■■■ 33.1
XRN2Q9H0D6 FARP1-231ENST00000600648 433 ntTSL 526.05■■□□□ 1.766e-7■■■■■ 33
XRN2Q9H0D6 POU2F1-216ENST00000560232 1195 ntTSL 213.7□□□□□ -0.225e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-213ENST00000557909 588 ntTSL 413□□□□□ -0.335e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-211ENST00000492850 615 ntTSL 510.79□□□□□ -0.685e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-214ENST00000559038 557 ntTSL 410.55□□□□□ -0.725e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-207ENST00000442313 496 ntTSL 39.85□□□□□ -0.835e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-201ENST00000271411 13945 ntTSL 1 (best)6.61□□□□□ -1.355e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.625e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.635e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-203ENST00000367865 14332 ntTSL 24.85□□□□□ -1.635e-7■■■■■ 32.9
XRN2Q9H0D6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.715e-7■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.14■■■□□ 2.744e-8■■■■■ 32.9
XRN2Q9H0D6 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 229.17■■■□□ 2.263e-9■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-211ENST00000620030 582 ntTSL 228.21■■■□□ 2.114e-8■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.69■■■□□ 2.024e-8■■■■■ 32.9
XRN2Q9H0D6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.937e-8■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-209ENST00000551690 603 ntTSL 326.65■■□□□ 1.864e-8■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.41■■□□□ 1.824e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-214ENST00000532289 610 ntTSL 324.81■■□□□ 1.564e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-215ENST00000533408 376 ntTSL 323.83■■□□□ 1.414e-8■■■■■ 32.9
XRN2Q9H0D6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.264e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-212ENST00000529477 568 ntTSL 322.41■■□□□ 1.184e-8■■■■■ 32.9
XRN2Q9H0D6 RFFL-211ENST00000584541 563 ntTSL 420.58■□□□□ 0.897e-8■■■■■ 32.9
XRN2Q9H0D6 AC004223.3-202ENST00000591723 676 ntTSL 519.63■□□□□ 0.737e-8■■■■■ 32.9
XRN2Q9H0D6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.694e-8■■■■■ 32.9
XRN2Q9H0D6 P4HB-212ENST00000478034 811 ntTSL 217.87■□□□□ 0.454e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-209ENST00000526960 793 ntTSL 517.79■□□□□ 0.444e-8■■■■■ 32.9
XRN2Q9H0D6 AC004223.3-203ENST00000592181 787 ntAPPRIS ALT2 TSL 517.34■□□□□ 0.377e-8■■■■■ 32.9
XRN2Q9H0D6 STK24-207ENST00000491878 547 ntTSL 417.18■□□□□ 0.344e-8■■■■■ 32.9
XRN2Q9H0D6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.58■□□□□ 0.254e-8■■■■■ 32.9
XRN2Q9H0D6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.077e-8■■■■■ 32.9
XRN2Q9H0D6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.044e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-211ENST00000528840 456 ntTSL 213.96□□□□□ -0.174e-8■■■■■ 32.9
XRN2Q9H0D6 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.27e-8■■■■■ 32.9
XRN2Q9H0D6 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.264e-8■■■■■ 32.9
XRN2Q9H0D6 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.03□□□□□ -0.324e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-216ENST00000534796 900 ntTSL 312.94□□□□□ -0.344e-8■■■■■ 32.9
XRN2Q9H0D6 RFFL-209ENST00000581265 596 ntTSL 412.94□□□□□ -0.347e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-204ENST00000475464 366 ntTSL 312.6□□□□□ -0.394e-8■■■■■ 32.9
XRN2Q9H0D6 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.614e-8■■■■■ 32.9
XRN2Q9H0D6 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.664e-8■■■■■ 32.9
XRN2Q9H0D6 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC10.59□□□□□ -0.717e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-208ENST00000524384 663 ntTSL 510.51□□□□□ -0.734e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-202ENST00000468531 830 ntTSL 37.15□□□□□ -1.264e-8■■■■■ 32.9
XRN2Q9H0D6 PTP4A2-207ENST00000494444 678 ntTSL 54.26□□□□□ -1.734e-8■■■■■ 32.9
XRN2Q9H0D6 EIF1-206ENST00000586699 572 ntTSL 23.6□□□□□ -1.834e-8■■■■■ 32.9
XRN2Q9H0D6 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.811e-7■■■■■ 32.9
XRN2Q9H0D6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.513e-6■■■■■ 32.8
XRN2Q9H0D6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.243e-6■■■■■ 32.8
XRN2Q9H0D6 CTU2-208ENST00000566637 1619 ntTSL 222.27■■□□□ 1.163e-6■■■■■ 32.8
XRN2Q9H0D6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.023e-6■■■■■ 32.8
XRN2Q9H0D6 CTU2-204ENST00000564105 1586 ntTSL 1 (best)21.4■■□□□ 1.023e-6■■■■■ 32.8
XRN2Q9H0D6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-7■■■■■ 32.7
XRN2Q9H0D6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.37■■□□□ 1.334e-7■■■■■ 32.7
XRN2Q9H0D6 SLC1A5-204ENST00000593713 774 ntTSL 313.15□□□□□ -0.33e-12■■■■■ 32.6
XRN2Q9H0D6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.34■■□□□ 1.493e-6■■■■■ 32.6
XRN2Q9H0D6 ZNF148-204ENST00000471196 566 ntTSL 422.78■■□□□ 1.243e-6■■■■■ 32.6
XRN2Q9H0D6 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.523e-6■■■■■ 32.6
XRN2Q9H0D6 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.533e-6■■■■■ 32.6
XRN2Q9H0D6 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.833e-6■■■■■ 32.6
XRN2Q9H0D6 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.293e-6■■■■■ 32.6
XRN2Q9H0D6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.06■□□□□ 0.483e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-209ENST00000472339 2130 ntTSL 514.38□□□□□ -0.113e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-208ENST00000469882 570 ntTSL 313.46□□□□□ -0.253e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-213ENST00000479176 541 ntTSL 212.42□□□□□ -0.423e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC12.07□□□□□ -0.483e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC11.45□□□□□ -0.583e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-206ENST00000465551 572 ntTSL 410.96□□□□□ -0.653e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-211ENST00000475315 2341 ntTSL 210.9□□□□□ -0.663e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.763e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC10.28□□□□□ -0.763e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.843e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-218ENST00000484790 571 ntTSL 46.81□□□□□ -1.323e-8■■■■■ 32.6
XRN2Q9H0D6 FXR1-219ENST00000484958 824 ntTSL 36.49□□□□□ -1.373e-8■■■■■ 32.6
XRN2Q9H0D6 MARS-206ENST00000546971 711 ntTSL 220.15■□□□□ 0.826e-31■■■■■ 32.6
Retrieved 100 of 21,068 protein–RNA pairs in 308.9 ms