RNA–Protein interactions for RNA: ENST00000465551.5

FXR1-206, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-206ENST00000465551 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
FXR1-206ENST00000465551 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
FXR1-206ENST00000465551 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
FXR1-206ENST00000465551 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
FXR1-206ENST00000465551 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
FXR1-206ENST00000465551 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
FXR1-206ENST00000465551 FOXD1Q16676 465 aa21.19■□□□□ 0.98
FXR1-206ENST00000465551 ABCC9O60706 1549 aa20.84■□□□□ 0.93
FXR1-206ENST00000465551 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
FXR1-206ENST00000465551 ADRA2BP18089 450 aa20.36■□□□□ 0.85
FXR1-206ENST00000465551 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
FXR1-206ENST00000465551 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
FXR1-206ENST00000465551 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
FXR1-206ENST00000465551 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
FXR1-206ENST00000465551 MSH5O43196 834 aa19.57■□□□□ 0.72
FXR1-206ENST00000465551 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
FXR1-206ENST00000465551 NACADO15069 1562 aa19.26■□□□□ 0.67
FXR1-206ENST00000465551 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
FXR1-206ENST00000465551 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
FXR1-206ENST00000465551 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
FXR1-206ENST00000465551 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
FXR1-206ENST00000465551 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
FXR1-206ENST00000465551 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
FXR1-206ENST00000465551 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
FXR1-206ENST00000465551 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
FXR1-206ENST00000465551 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
FXR1-206ENST00000465551 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
FXR1-206ENST00000465551 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
FXR1-206ENST00000465551 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
FXR1-206ENST00000465551 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
FXR1-206ENST00000465551 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
FXR1-206ENST00000465551 MAPK8IP2Q13387 824 aaPredicted RBP18.48■□□□□ 0.55
FXR1-206ENST00000465551 CUX2O14529 1486 aa18.47■□□□□ 0.55
FXR1-206ENST00000465551 KCNA4P22459 653 aa18.27■□□□□ 0.52
FXR1-206ENST00000465551 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
FXR1-206ENST00000465551 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
FXR1-206ENST00000465551 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
FXR1-206ENST00000465551 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
FXR1-206ENST00000465551 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
FXR1-206ENST00000465551 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
FXR1-206ENST00000465551 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
FXR1-206ENST00000465551 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
FXR1-206ENST00000465551 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
FXR1-206ENST00000465551 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
FXR1-206ENST00000465551 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
FXR1-206ENST00000465551 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
FXR1-206ENST00000465551 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
FXR1-206ENST00000465551 NESP48681 1621 aa17.64■□□□□ 0.41
FXR1-206ENST00000465551 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
FXR1-206ENST00000465551 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
FXR1-206ENST00000465551 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
FXR1-206ENST00000465551 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
FXR1-206ENST00000465551 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
FXR1-206ENST00000465551 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
FXR1-206ENST00000465551 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
FXR1-206ENST00000465551 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
FXR1-206ENST00000465551 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
FXR1-206ENST00000465551 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
FXR1-206ENST00000465551 WIZO95785 1651 aa17.42■□□□□ 0.38
FXR1-206ENST00000465551 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
FXR1-206ENST00000465551 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
FXR1-206ENST00000465551 WDR62O43379 1518 aa17.33■□□□□ 0.37
FXR1-206ENST00000465551 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
FXR1-206ENST00000465551 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
FXR1-206ENST00000465551 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
FXR1-206ENST00000465551 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
FXR1-206ENST00000465551 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
FXR1-206ENST00000465551 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
FXR1-206ENST00000465551 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
FXR1-206ENST00000465551 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
FXR1-206ENST00000465551 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
FXR1-206ENST00000465551 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
FXR1-206ENST00000465551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.327e-6■□□□□ 10.8
FXR1-206ENST00000465551 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
FXR1-206ENST00000465551 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
FXR1-206ENST00000465551 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
FXR1-206ENST00000465551 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
FXR1-206ENST00000465551 CFTRP13569 1480 aa16.94■□□□□ 0.3
FXR1-206ENST00000465551 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
FXR1-206ENST00000465551 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
FXR1-206ENST00000465551 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
FXR1-206ENST00000465551 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
FXR1-206ENST00000465551 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
FXR1-206ENST00000465551 ZBTB22O15209 634 aa16.8■□□□□ 0.28
FXR1-206ENST00000465551 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
FXR1-206ENST00000465551 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
FXR1-206ENST00000465551 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
FXR1-206ENST00000465551 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
FXR1-206ENST00000465551 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
FXR1-206ENST00000465551 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
FXR1-206ENST00000465551 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
FXR1-206ENST00000465551 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
FXR1-206ENST00000465551 CHD1O14646 1710 aa16.65■□□□□ 0.26
FXR1-206ENST00000465551 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
FXR1-206ENST00000465551 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
FXR1-206ENST00000465551 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
FXR1-206ENST00000465551 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
FXR1-206ENST00000465551 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
FXR1-206ENST00000465551 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
FXR1-206ENST00000465551 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms