RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
PTP4A2-214ENST00000532289 ABCC9O60706 1549 aa46.95■■■■■ 5.11
PTP4A2-214ENST00000532289 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
PTP4A2-214ENST00000532289 DNAJC5BQ9UF47 199 aa45.2■■■■■ 4.83
PTP4A2-214ENST00000532289 RB1CC1Q8TDY2 1594 aa44.18■■■■■ 4.66
PTP4A2-214ENST00000532289 NACADO15069 1562 aa43.58■■■■■ 4.57
PTP4A2-214ENST00000532289 PABPN1Q86U42 306 aaKnown RBP eCLIP43.51■■■■■ 4.56
PTP4A2-214ENST00000532289 UNC13AQ9UPW8 1703 aa43.25■■■■■ 4.51
PTP4A2-214ENST00000532289 DCAF8L2P0C7V8 631 aa42.99■■■■■ 4.47
PTP4A2-214ENST00000532289 BICRAQ9NZM4 1560 aa42.98■■■■■ 4.47
PTP4A2-214ENST00000532289 MYO15BQ96JP2 1530 aa42.59■■■■■ 4.41
PTP4A2-214ENST00000532289 CECR2Q9BXF3 1484 aa42.44■■■■■ 4.38
PTP4A2-214ENST00000532289 DNAJC5Q9H3Z4 198 aa42.4■■■■■ 4.38
PTP4A2-214ENST00000532289 CC2D2AQ9P2K1 1620 aa42.39■■■■■ 4.38
PTP4A2-214ENST00000532289 SHROOM4Q9ULL8 1493 aa42.24■■■■■ 4.35
PTP4A2-214ENST00000532289 EIF4G1Q04637 1599 aaKnown RBP41.99■■■■■ 4.31
PTP4A2-214ENST00000532289 SCRIBQ14160 1630 aa41.61■■■■■ 4.25
PTP4A2-214ENST00000532289 DCAF1Q9Y4B6 1507 aa41.59■■■■■ 4.25
PTP4A2-214ENST00000532289 ZCCHC6Q5VYS8 1495 aaKnown RBP41.51■■■■■ 4.24
PTP4A2-214ENST00000532289 CUX2O14529 1486 aa41■■■■■ 4.15
PTP4A2-214ENST00000532289 ERCC6Q03468 1493 aa40.6■■■■■ 4.09
PTP4A2-214ENST00000532289 NCAPD3P42695 1498 aa40.26■■■■■ 4.03
PTP4A2-214ENST00000532289 NESP48681 1621 aa40■■■■□ 3.99
PTP4A2-214ENST00000532289 TRIM41Q8WV44 630 aa39.95■■■■□ 3.99
PTP4A2-214ENST00000532289 ATAD2BQ9ULI0 1458 aa39.94■■■■□ 3.98
PTP4A2-214ENST00000532289 THOC2Q8NI27 1593 aaKnown RBP39.87■■■■□ 3.97
PTP4A2-214ENST00000532289 HMGXB3Q12766 1538 aa39.83■■■■□ 3.97
PTP4A2-214ENST00000532289 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
PTP4A2-214ENST00000532289 SMARCA4P51532 1647 aa39.6■■■■□ 3.93
PTP4A2-214ENST00000532289 LAMC3Q9Y6N6 1575 aa39.54■■■■□ 3.92
PTP4A2-214ENST00000532289 KIF21AQ7Z4S6 1674 aa39.48■■■■□ 3.91
PTP4A2-214ENST00000532289 BAZ1BQ9UIG0 1483 aaKnown RBP39.46■■■■□ 3.91
PTP4A2-214ENST00000532289 PDS5BQ9NTI5 1447 aa39.32■■■■□ 3.89
PTP4A2-214ENST00000532289 PEG3Q9GZU2 1588 aa39.25■■■■□ 3.87
PTP4A2-214ENST00000532289 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
PTP4A2-214ENST00000532289 MRC2Q9UBG0 1479 aa39.06■■■■□ 3.84
PTP4A2-214ENST00000532289 WDR62O43379 1518 aa39.04■■■■□ 3.84
PTP4A2-214ENST00000532289 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
PTP4A2-214ENST00000532289 OSCARQ8IYS5 282 aa38.9■■■■□ 3.82
PTP4A2-214ENST00000532289 MROH2BQ7Z745 1585 aa38.83■■■■□ 3.81
PTP4A2-214ENST00000532289 CEP164Q9UPV0 1460 aa38.65■■■■□ 3.78
PTP4A2-214ENST00000532289 RIMBP3CA6NJZ7 1639 aa38.57■■■■□ 3.77
PTP4A2-214ENST00000532289 RIMBP3BA6NNM3 1639 aa38.57■■■■□ 3.77
PTP4A2-214ENST00000532289 RIMBP3Q9UFD9 1639 aa38.57■■■■□ 3.77
PTP4A2-214ENST00000532289 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
PTP4A2-214ENST00000532289 WIZO95785 1651 aa38.32■■■■□ 3.72
PTP4A2-214ENST00000532289 ARHGEF11O15085 1522 aa38.3■■■■□ 3.72
PTP4A2-214ENST00000532289 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
PTP4A2-214ENST00000532289 CFTRP13569 1480 aa38.26■■■■□ 3.72
PTP4A2-214ENST00000532289 CYB5RLQ6IPT4 315 aa38.06■■■■□ 3.68
PTP4A2-214ENST00000532289 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
PTP4A2-214ENST00000532289 TRHP20396 242 aaPredicted RBP38.01■■■■□ 3.68
PTP4A2-214ENST00000532289 IFT140Q96RY7 1462 aa37.94■■■■□ 3.66
PTP4A2-214ENST00000532289 ARAP1Q96P48 1450 aa37.84■■■■□ 3.65
PTP4A2-214ENST00000532289 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
PTP4A2-214ENST00000532289 AEBP2Q6ZN18 517 aaPredicted RBP37.8■■■■□ 3.64
PTP4A2-214ENST00000532289 EIF4G3O43432 1585 aaKnown RBP37.74■■■■□ 3.63
PTP4A2-214ENST00000532289 TOP2AP11388 1531 aaKnown RBP37.72■■■■□ 3.63
PTP4A2-214ENST00000532289 CHD1O14646 1710 aa37.72■■■■□ 3.63
PTP4A2-214ENST00000532289 RSF1Q96T23 1441 aaPredicted RBP37.65■■■■□ 3.62
PTP4A2-214ENST00000532289 TOPBP1Q92547 1522 aa37.65■■■■□ 3.62
PTP4A2-214ENST00000532289 AQRO60306 1485 aaKnown RBP eCLIP37.5■■■■□ 3.59
PTP4A2-214ENST00000532289 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
PTP4A2-214ENST00000532289 TARBP1Q13395 1621 aaKnown RBP37.44■■■■□ 3.58
PTP4A2-214ENST00000532289 FBLN2P98095 1184 aa37.44■■■■□ 3.58
PTP4A2-214ENST00000532289 DNMBPQ6XZF7 1577 aa37.4■■■■□ 3.58
PTP4A2-214ENST00000532289 CCDC88BA6NC98 1476 aa37.32■■■■□ 3.56
PTP4A2-214ENST00000532289 CLASP1Q7Z460 1538 aa37.26■■■■□ 3.55
PTP4A2-214ENST00000532289 POLA1P09884 1462 aaPredicted RBP37.18■■■■□ 3.54
PTP4A2-214ENST00000532289 SYNJ1O43426 1573 aa37.08■■■■□ 3.53
PTP4A2-214ENST00000532289 SNAPC4Q5SXM2 1469 aa37.07■■■■□ 3.52
PTP4A2-214ENST00000532289 RAD54L2Q9Y4B4 1467 aa37.07■■■■□ 3.52
PTP4A2-214ENST00000532289 TDRD9Q8NDG6 1382 aaKnown RBP37.05■■■■□ 3.52
PTP4A2-214ENST00000532289 CHMP7Q8WUX9 453 aaPredicted RBP36.99■■■■□ 3.51
PTP4A2-214ENST00000532289 SOGA1O94964 1423 aa36.97■■■■□ 3.51
PTP4A2-214ENST00000532289 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
PTP4A2-214ENST00000532289 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
PTP4A2-214ENST00000532289 GAPVD1Q14C86 1478 aa36.92■■■■□ 3.5
PTP4A2-214ENST00000532289 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
PTP4A2-214ENST00000532289 GRIN2BQ13224 1484 aa36.8■■■■□ 3.48
PTP4A2-214ENST00000532289 FGD5Q6ZNL6 1462 aa36.76■■■■□ 3.48
PTP4A2-214ENST00000532289 PBRM1Q86U86 1689 aa36.61■■■■□ 3.45
PTP4A2-214ENST00000532289 ERCC6L2Q5T890 1561 aa36.57■■■■□ 3.45
PTP4A2-214ENST00000532289 CUX1P39880 1505 aa36.55■■■■□ 3.44
PTP4A2-214ENST00000532289 KIF13AQ9H1H9 1805 aa36.52■■■■□ 3.44
PTP4A2-214ENST00000532289 CEP170Q5SW79 1584 aa36.4■■■■□ 3.42
PTP4A2-214ENST00000532289 ILDR1Q86SU0 546 aaPredicted RBP36.37■■■■□ 3.41
PTP4A2-214ENST00000532289 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
PTP4A2-214ENST00000532289 GRIN2AQ12879 1464 aa36.33■■■■□ 3.41
PTP4A2-214ENST00000532289 SHROOM2Q13796 1616 aa36.29■■■■□ 3.4
PTP4A2-214ENST00000532289 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
PTP4A2-214ENST00000532289 NUP160Q12769 1436 aa36.27■■■■□ 3.4
PTP4A2-214ENST00000532289 KDM4FA0A1W2PPD8 638 aa36.21■■■■□ 3.39
PTP4A2-214ENST00000532289 ADAMTS12P58397 1594 aa36.16■■■■□ 3.38
PTP4A2-214ENST00000532289 ABCC10Q5T3U5 1492 aa36.11■■■■□ 3.37
PTP4A2-214ENST00000532289 FAM69CQ0P6D2 419 aa36.1■■■■□ 3.37
PTP4A2-214ENST00000532289 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
PTP4A2-214ENST00000532289 FHAD1B1AJZ9 1412 aa36■■■■□ 3.35
PTP4A2-214ENST00000532289 DIP2BQ9P265 1576 aa35.99■■■■□ 3.35
PTP4A2-214ENST00000532289 KDM6BO15054 1643 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms