RNA–Protein interactions for RNA: ENST00000468531.1

PTP4A2-202, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-202ENST00000468531 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
PTP4A2-202ENST00000468531 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
PTP4A2-202ENST00000468531 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
PTP4A2-202ENST00000468531 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
PTP4A2-202ENST00000468531 FOXD1Q16676 465 aa20.05■□□□□ 0.8
PTP4A2-202ENST00000468531 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
PTP4A2-202ENST00000468531 MSH5O43196 834 aa19.03■□□□□ 0.64
PTP4A2-202ENST00000468531 PIAS4Q8N2W9 510 aaPredicted RBP18.66■□□□□ 0.58
PTP4A2-202ENST00000468531 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
PTP4A2-202ENST00000468531 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
PTP4A2-202ENST00000468531 ADRA2BP18089 450 aa18.29■□□□□ 0.52
PTP4A2-202ENST00000468531 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
PTP4A2-202ENST00000468531 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
PTP4A2-202ENST00000468531 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
PTP4A2-202ENST00000468531 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
PTP4A2-202ENST00000468531 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
PTP4A2-202ENST00000468531 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
PTP4A2-202ENST00000468531 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
PTP4A2-202ENST00000468531 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
PTP4A2-202ENST00000468531 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
PTP4A2-202ENST00000468531 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
PTP4A2-202ENST00000468531 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
PTP4A2-202ENST00000468531 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
PTP4A2-202ENST00000468531 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
PTP4A2-202ENST00000468531 KCNA4P22459 653 aa15.64■□□□□ 0.09
PTP4A2-202ENST00000468531 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
PTP4A2-202ENST00000468531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTP4A2-202ENST00000468531 POTEHQ6S545 545 aa15.09■□□□□ 0.01
PTP4A2-202ENST00000468531 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
PTP4A2-202ENST00000468531 CAPN15O75808 1086 aa14.97□□□□□ -0.01
PTP4A2-202ENST00000468531 DSG3P32926 999 aa14.95□□□□□ -0.02
PTP4A2-202ENST00000468531 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
PTP4A2-202ENST00000468531 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
PTP4A2-202ENST00000468531 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
PTP4A2-202ENST00000468531 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
PTP4A2-202ENST00000468531 APLP2Q06481 763 aa14.63□□□□□ -0.07
PTP4A2-202ENST00000468531 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
PTP4A2-202ENST00000468531 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
PTP4A2-202ENST00000468531 ABCB7O75027 752 aa14.55□□□□□ -0.08
PTP4A2-202ENST00000468531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
PTP4A2-202ENST00000468531 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
PTP4A2-202ENST00000468531 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
PTP4A2-202ENST00000468531 ZBTB22O15209 634 aa14.43□□□□□ -0.1
PTP4A2-202ENST00000468531 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
PTP4A2-202ENST00000468531 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
PTP4A2-202ENST00000468531 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
PTP4A2-202ENST00000468531 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
PTP4A2-202ENST00000468531 POLA2Q14181 598 aa14.1□□□□□ -0.15
PTP4A2-202ENST00000468531 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
PTP4A2-202ENST00000468531 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
PTP4A2-202ENST00000468531 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
PTP4A2-202ENST00000468531 ATXN8OSP0DMR3 200 aa13.94□□□□□ -0.18
PTP4A2-202ENST00000468531 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
PTP4A2-202ENST00000468531 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
PTP4A2-202ENST00000468531 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
PTP4A2-202ENST00000468531 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
PTP4A2-202ENST00000468531 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
PTP4A2-202ENST00000468531 HAX1O00165 279 aa13.66□□□□□ -0.22
PTP4A2-202ENST00000468531 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
PTP4A2-202ENST00000468531 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
PTP4A2-202ENST00000468531 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTP4A2-202ENST00000468531 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
PTP4A2-202ENST00000468531 FBLN2P98095 1184 aa13.41□□□□□ -0.26
PTP4A2-202ENST00000468531 EVX2Q03828 476 aa13.36□□□□□ -0.27
PTP4A2-202ENST00000468531 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
PTP4A2-202ENST00000468531 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
PTP4A2-202ENST00000468531 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
PTP4A2-202ENST00000468531 CCDC180Q9P1Z9 1646 aa13.25□□□□□ -0.29
PTP4A2-202ENST00000468531 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
PTP4A2-202ENST00000468531 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
PTP4A2-202ENST00000468531 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
PTP4A2-202ENST00000468531 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
PTP4A2-202ENST00000468531 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
PTP4A2-202ENST00000468531 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
PTP4A2-202ENST00000468531 GABBR2O75899 941 aa13.09□□□□□ -0.31
PTP4A2-202ENST00000468531 LHX8Q68G74 356 aa13.06□□□□□ -0.32
PTP4A2-202ENST00000468531 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PTP4A2-202ENST00000468531 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
PTP4A2-202ENST00000468531 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTP4A2-202ENST00000468531 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
PTP4A2-202ENST00000468531 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
PTP4A2-202ENST00000468531 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
PTP4A2-202ENST00000468531 CLCN6P51797 869 aa12.78□□□□□ -0.36
PTP4A2-202ENST00000468531 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
PTP4A2-202ENST00000468531 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
PTP4A2-202ENST00000468531 PROM2Q8N271 834 aa12.75□□□□□ -0.37
PTP4A2-202ENST00000468531 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
PTP4A2-202ENST00000468531 FKBP8Q14318 412 aa12.68□□□□□ -0.38
PTP4A2-202ENST00000468531 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
PTP4A2-202ENST00000468531 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
PTP4A2-202ENST00000468531 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-202ENST00000468531 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
PTP4A2-202ENST00000468531 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
PTP4A2-202ENST00000468531 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
PTP4A2-202ENST00000468531 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
PTP4A2-202ENST00000468531 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
PTP4A2-202ENST00000468531 NACADO15069 1562 aa12.43□□□□□ -0.42
PTP4A2-202ENST00000468531 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
PTP4A2-202ENST00000468531 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
PTP4A2-202ENST00000468531 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms