RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-231ENST00000600648 NISCHQ9Y2I1 1504 aa53.58■■■■■ 6.17
FARP1-231ENST00000600648 CCDC180Q9P1Z9 1646 aa47.89■■■■■ 5.26
FARP1-231ENST00000600648 ABCC9O60706 1549 aa47.84■■■■■ 5.25
FARP1-231ENST00000600648 RB1CC1Q8TDY2 1594 aa45.53■■■■■ 4.88
FARP1-231ENST00000600648 DCAF8L2P0C7V8 631 aa45.33■■■■■ 4.85
FARP1-231ENST00000600648 NACADO15069 1562 aa45.25■■■■■ 4.83
FARP1-231ENST00000600648 DNAJC5BQ9UF47 199 aa44.68■■■■■ 4.74
FARP1-231ENST00000600648 PABPN1Q86U42 306 aaKnown RBP eCLIP44.64■■■■■ 4.74
FARP1-231ENST00000600648 MYO15BQ96JP2 1530 aa44.64■■■■■ 4.74
FARP1-231ENST00000600648 UNC13AQ9UPW8 1703 aa44.47■■■■■ 4.71
FARP1-231ENST00000600648 ZCCHC6Q5VYS8 1495 aaKnown RBP44.45■■■■■ 4.71
FARP1-231ENST00000600648 BICRAQ9NZM4 1560 aa44.21■■■■■ 4.67
FARP1-231ENST00000600648 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.66
FARP1-231ENST00000600648 SCRIBQ14160 1630 aa43.8■■■■■ 4.6
FARP1-231ENST00000600648 SHROOM4Q9ULL8 1493 aa43.53■■■■■ 4.56
FARP1-231ENST00000600648 CC2D2AQ9P2K1 1620 aa43.15■■■■■ 4.5
FARP1-231ENST00000600648 EIF4G1Q04637 1599 aaKnown RBP43.11■■■■■ 4.49
FARP1-231ENST00000600648 CECR2Q9BXF3 1484 aa43.03■■■■■ 4.48
FARP1-231ENST00000600648 NCAPD3P42695 1498 aa41.79■■■■■ 4.28
FARP1-231ENST00000600648 ATAD2BQ9ULI0 1458 aa41.74■■■■■ 4.27
FARP1-231ENST00000600648 SMARCA4P51532 1647 aa41.74■■■■■ 4.27
FARP1-231ENST00000600648 SMARCA2P51531 1590 aa41.6■■■■■ 4.25
FARP1-231ENST00000600648 BAZ1AQ9NRL2 1556 aaPredicted RBP41.55■■■■■ 4.24
FARP1-231ENST00000600648 HMGXB3Q12766 1538 aa41.48■■■■■ 4.23
FARP1-231ENST00000600648 BAZ1BQ9UIG0 1483 aaKnown RBP41.37■■■■■ 4.21
FARP1-231ENST00000600648 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
FARP1-231ENST00000600648 ERCC6Q03468 1493 aa41.28■■■■■ 4.2
FARP1-231ENST00000600648 PEG3Q9GZU2 1588 aa41.26■■■■■ 4.2
FARP1-231ENST00000600648 NESP48681 1621 aa41.16■■■■■ 4.18
FARP1-231ENST00000600648 CUX2O14529 1486 aa41.02■■■■■ 4.16
FARP1-231ENST00000600648 WIZO95785 1651 aa40.84■■■■■ 4.13
FARP1-231ENST00000600648 LAMC3Q9Y6N6 1575 aa40.8■■■■■ 4.12
FARP1-231ENST00000600648 DNAJC5Q9H3Z4 198 aa40.79■■■■■ 4.12
FARP1-231ENST00000600648 PDS5BQ9NTI5 1447 aa40.6■■■■■ 4.09
FARP1-231ENST00000600648 THOC2Q8NI27 1593 aaKnown RBP40.6■■■■■ 4.09
FARP1-231ENST00000600648 CADPSQ9ULU8 1353 aa40.58■■■■■ 4.09
FARP1-231ENST00000600648 KIF21AQ7Z4S6 1674 aa40.56■■■■■ 4.08
FARP1-231ENST00000600648 RSF1Q96T23 1441 aaPredicted RBP40.56■■■■■ 4.08
FARP1-231ENST00000600648 TOP2AP11388 1531 aaKnown RBP40.31■■■■■ 4.04
FARP1-231ENST00000600648 MRC2Q9UBG0 1479 aa40.25■■■■■ 4.03
FARP1-231ENST00000600648 CFTRP13569 1480 aa40.14■■■■■ 4.02
FARP1-231ENST00000600648 CEP164Q9UPV0 1460 aa40.14■■■■■ 4.02
FARP1-231ENST00000600648 FANCD2Q9BXW9 1451 aa40.13■■■■■ 4.02
FARP1-231ENST00000600648 WDR62O43379 1518 aa40.11■■■■■ 4.01
FARP1-231ENST00000600648 CCDC88BA6NC98 1476 aa39.89■■■■□ 3.98
FARP1-231ENST00000600648 URB2Q14146 1524 aaKnown RBP39.79■■■■□ 3.96
FARP1-231ENST00000600648 PRDM2Q13029 1718 aa39.67■■■■□ 3.94
FARP1-231ENST00000600648 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
FARP1-231ENST00000600648 IFT140Q96RY7 1462 aa39.31■■■■□ 3.88
FARP1-231ENST00000600648 ZNF608Q9ULD9 1512 aaPredicted RBP39.29■■■■□ 3.88
FARP1-231ENST00000600648 OSCARQ8IYS5 282 aa39.27■■■■□ 3.88
FARP1-231ENST00000600648 ABCC8Q09428 1581 aa39.26■■■■□ 3.88
FARP1-231ENST00000600648 TRIM41Q8WV44 630 aa39.24■■■■□ 3.87
FARP1-231ENST00000600648 DNMBPQ6XZF7 1577 aa39.24■■■■□ 3.87
FARP1-231ENST00000600648 SUPT5HO00267 1087 aaKnown RBP39.1■■■■□ 3.85
FARP1-231ENST00000600648 EIF4G3O43432 1585 aaKnown RBP39.03■■■■□ 3.84
FARP1-231ENST00000600648 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
FARP1-231ENST00000600648 TARBP1Q13395 1621 aaKnown RBP38.98■■■■□ 3.83
FARP1-231ENST00000600648 AQRO60306 1485 aaKnown RBP eCLIP38.98■■■■□ 3.833e-6■■□□□ 13.8
FARP1-231ENST00000600648 RAD54L2Q9Y4B4 1467 aa38.92■■■■□ 3.82
FARP1-231ENST00000600648 SOGA1O94964 1423 aa38.86■■■■□ 3.81
FARP1-231ENST00000600648 FGD5Q6ZNL6 1462 aa38.81■■■■□ 3.8
FARP1-231ENST00000600648 CUX1P39880 1505 aa38.81■■■■□ 3.8
FARP1-231ENST00000600648 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
FARP1-231ENST00000600648 FBLN2P98095 1184 aa38.75■■■■□ 3.79
FARP1-231ENST00000600648 RIMBP3CA6NJZ7 1639 aa38.7■■■■□ 3.79
FARP1-231ENST00000600648 RIMBP3BA6NNM3 1639 aa38.7■■■■□ 3.79
FARP1-231ENST00000600648 RIMBP3Q9UFD9 1639 aa38.7■■■■□ 3.79
FARP1-231ENST00000600648 CHD1O14646 1710 aa38.69■■■■□ 3.78
FARP1-231ENST00000600648 ARHGEF11O15085 1522 aa38.61■■■■□ 3.77
FARP1-231ENST00000600648 SNAPC4Q5SXM2 1469 aa38.57■■■■□ 3.76
FARP1-231ENST00000600648 WDR97A6NE52 1622 aa38.52■■■■□ 3.76
FARP1-231ENST00000600648 GRIN2BQ13224 1484 aa38.47■■■■□ 3.75
FARP1-231ENST00000600648 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
FARP1-231ENST00000600648 MAGI1Q96QZ7 1491 aaPredicted RBP38.41■■■■□ 3.74
FARP1-231ENST00000600648 CYB5RLQ6IPT4 315 aa38.41■■■■□ 3.74
FARP1-231ENST00000600648 GAPVD1Q14C86 1478 aa38.38■■■■□ 3.73
FARP1-231ENST00000600648 ABCA10Q8WWZ4 1543 aa38.34■■■■□ 3.73
FARP1-231ENST00000600648 SYNJ2O15056 1496 aa38.3■■■■□ 3.72
FARP1-231ENST00000600648 PBRM1Q86U86 1689 aa38.3■■■■□ 3.72
FARP1-231ENST00000600648 WRNQ14191 1432 aaPredicted RBP eCLIP38.27■■■■□ 3.72
FARP1-231ENST00000600648 ARAP1Q96P48 1450 aa38.27■■■■□ 3.72
FARP1-231ENST00000600648 SYNJ1O43426 1573 aa38.25■■■■□ 3.71
FARP1-231ENST00000600648 ABCA5Q8WWZ7 1642 aa38.25■■■■□ 3.71
FARP1-231ENST00000600648 CLASP1Q7Z460 1538 aa38.23■■■■□ 3.71
FARP1-231ENST00000600648 TOP2BQ02880 1626 aa38.2■■■■□ 3.71
FARP1-231ENST00000600648 BIVM-ERCC5R4GMW8 1640 aa38.19■■■■□ 3.7
FARP1-231ENST00000600648 ADAMTS12P58397 1594 aa37.97■■■■□ 3.67
FARP1-231ENST00000600648 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
FARP1-231ENST00000600648 TRHP20396 242 aaPredicted RBP37.93■■■■□ 3.66
FARP1-231ENST00000600648 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
FARP1-231ENST00000600648 ERICH3Q5RHP9 1530 aa37.85■■■■□ 3.65
FARP1-231ENST00000600648 CEP170Q5SW79 1584 aa37.83■■■■□ 3.65
FARP1-231ENST00000600648 NUP160Q12769 1436 aa37.81■■■■□ 3.64
FARP1-231ENST00000600648 ERCC6L2Q5T890 1561 aa37.74■■■■□ 3.63
FARP1-231ENST00000600648 SHROOM2Q13796 1616 aa37.58■■■■□ 3.61
FARP1-231ENST00000600648 KIF27Q86VH2 1401 aa37.52■■■■□ 3.6
FARP1-231ENST00000600648 JPH4Q96JJ6 628 aa37.5■■■■□ 3.59
FARP1-231ENST00000600648 IGF1RP08069 1367 aa37.49■■■■□ 3.59
FARP1-231ENST00000600648 PRG4Q92954 1404 aaPredicted RBP37.49■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms