RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
PTP4A2-211ENST00000528840 ABCC9O60706 1549 aa25.75■■□□□ 1.71
PTP4A2-211ENST00000528840 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
PTP4A2-211ENST00000528840 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
PTP4A2-211ENST00000528840 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
PTP4A2-211ENST00000528840 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
PTP4A2-211ENST00000528840 NACADO15069 1562 aa24.17■■□□□ 1.46
PTP4A2-211ENST00000528840 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
PTP4A2-211ENST00000528840 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PTP4A2-211ENST00000528840 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
PTP4A2-211ENST00000528840 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
PTP4A2-211ENST00000528840 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
PTP4A2-211ENST00000528840 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
PTP4A2-211ENST00000528840 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
PTP4A2-211ENST00000528840 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
PTP4A2-211ENST00000528840 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
PTP4A2-211ENST00000528840 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
PTP4A2-211ENST00000528840 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
PTP4A2-211ENST00000528840 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
PTP4A2-211ENST00000528840 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
PTP4A2-211ENST00000528840 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
PTP4A2-211ENST00000528840 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
PTP4A2-211ENST00000528840 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
PTP4A2-211ENST00000528840 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
PTP4A2-211ENST00000528840 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
PTP4A2-211ENST00000528840 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
PTP4A2-211ENST00000528840 CUX2O14529 1486 aa22.15■■□□□ 1.14
PTP4A2-211ENST00000528840 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
PTP4A2-211ENST00000528840 NESP48681 1621 aa22.08■■□□□ 1.13
PTP4A2-211ENST00000528840 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
PTP4A2-211ENST00000528840 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
PTP4A2-211ENST00000528840 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
PTP4A2-211ENST00000528840 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
PTP4A2-211ENST00000528840 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
PTP4A2-211ENST00000528840 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
PTP4A2-211ENST00000528840 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
PTP4A2-211ENST00000528840 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
PTP4A2-211ENST00000528840 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
PTP4A2-211ENST00000528840 WIZO95785 1651 aa21.65■■□□□ 1.06
PTP4A2-211ENST00000528840 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
PTP4A2-211ENST00000528840 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
PTP4A2-211ENST00000528840 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
PTP4A2-211ENST00000528840 WDR62O43379 1518 aa21.45■■□□□ 1.02
PTP4A2-211ENST00000528840 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
PTP4A2-211ENST00000528840 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
PTP4A2-211ENST00000528840 CFTRP13569 1480 aa21.39■■□□□ 1.02
PTP4A2-211ENST00000528840 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
PTP4A2-211ENST00000528840 OSCARQ8IYS5 282 aa21.31■■□□□ 1
PTP4A2-211ENST00000528840 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
PTP4A2-211ENST00000528840 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
PTP4A2-211ENST00000528840 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PTP4A2-211ENST00000528840 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
PTP4A2-211ENST00000528840 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
PTP4A2-211ENST00000528840 TOPBP1Q92547 1522 aa21■□□□□ 0.95
PTP4A2-211ENST00000528840 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
PTP4A2-211ENST00000528840 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
PTP4A2-211ENST00000528840 FBLN2P98095 1184 aa20.88■□□□□ 0.93
PTP4A2-211ENST00000528840 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
PTP4A2-211ENST00000528840 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
PTP4A2-211ENST00000528840 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
PTP4A2-211ENST00000528840 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
PTP4A2-211ENST00000528840 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
PTP4A2-211ENST00000528840 EIF4G3O43432 1585 aaKnown RBP20.82■□□□□ 0.92
PTP4A2-211ENST00000528840 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
PTP4A2-211ENST00000528840 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
PTP4A2-211ENST00000528840 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
PTP4A2-211ENST00000528840 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
PTP4A2-211ENST00000528840 SOGA1O94964 1423 aa20.77■□□□□ 0.91
PTP4A2-211ENST00000528840 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
PTP4A2-211ENST00000528840 CHD1O14646 1710 aa20.7■□□□□ 0.9
PTP4A2-211ENST00000528840 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
PTP4A2-211ENST00000528840 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
PTP4A2-211ENST00000528840 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
PTP4A2-211ENST00000528840 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
PTP4A2-211ENST00000528840 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
PTP4A2-211ENST00000528840 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
PTP4A2-211ENST00000528840 CUX1P39880 1505 aa20.59■□□□□ 0.89
PTP4A2-211ENST00000528840 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
PTP4A2-211ENST00000528840 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
PTP4A2-211ENST00000528840 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
PTP4A2-211ENST00000528840 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
PTP4A2-211ENST00000528840 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
PTP4A2-211ENST00000528840 CLASP1Q7Z460 1538 aa20.46■□□□□ 0.87
PTP4A2-211ENST00000528840 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
PTP4A2-211ENST00000528840 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
PTP4A2-211ENST00000528840 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
PTP4A2-211ENST00000528840 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
PTP4A2-211ENST00000528840 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
PTP4A2-211ENST00000528840 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
PTP4A2-211ENST00000528840 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
PTP4A2-211ENST00000528840 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
PTP4A2-211ENST00000528840 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
PTP4A2-211ENST00000528840 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
PTP4A2-211ENST00000528840 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
PTP4A2-211ENST00000528840 NUP160Q12769 1436 aa20.18■□□□□ 0.82
PTP4A2-211ENST00000528840 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
PTP4A2-211ENST00000528840 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
PTP4A2-211ENST00000528840 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
PTP4A2-211ENST00000528840 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
PTP4A2-211ENST00000528840 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms