RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 NISCHQ9Y2I1 1504 aa49.69■■■■■ 5.54
PTP4A2-215ENST00000533408 CCDC180Q9P1Z9 1646 aa43.88■■■■■ 4.61
PTP4A2-215ENST00000533408 ABCC9O60706 1549 aa42.25■■■■■ 4.35
PTP4A2-215ENST00000533408 ZCCHC6Q5VYS8 1495 aaKnown RBP41.49■■■■■ 4.23
PTP4A2-215ENST00000533408 DCAF8L2P0C7V8 631 aa41.37■■■■■ 4.21
PTP4A2-215ENST00000533408 DCAF1Q9Y4B6 1507 aa41.22■■■■■ 4.19
PTP4A2-215ENST00000533408 MYO15BQ96JP2 1530 aa41.18■■■■■ 4.18
PTP4A2-215ENST00000533408 NACADO15069 1562 aa41.17■■■■■ 4.18
PTP4A2-215ENST00000533408 RB1CC1Q8TDY2 1594 aa41.04■■■■■ 4.16
PTP4A2-215ENST00000533408 SCRIBQ14160 1630 aa39.99■■■■□ 3.99
PTP4A2-215ENST00000533408 UNC13AQ9UPW8 1703 aa39.84■■■■□ 3.97
PTP4A2-215ENST00000533408 PABPN1Q86U42 306 aaKnown RBP eCLIP39.63■■■■□ 3.93
PTP4A2-215ENST00000533408 BICRAQ9NZM4 1560 aa39.59■■■■□ 3.93
PTP4A2-215ENST00000533408 SHROOM4Q9ULL8 1493 aa39.58■■■■□ 3.93
PTP4A2-215ENST00000533408 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
PTP4A2-215ENST00000533408 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
PTP4A2-215ENST00000533408 BAZ1AQ9NRL2 1556 aaPredicted RBP38.53■■■■□ 3.76
PTP4A2-215ENST00000533408 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
PTP4A2-215ENST00000533408 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
PTP4A2-215ENST00000533408 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
PTP4A2-215ENST00000533408 RSF1Q96T23 1441 aaPredicted RBP38.11■■■■□ 3.69
PTP4A2-215ENST00000533408 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
PTP4A2-215ENST00000533408 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
PTP4A2-215ENST00000533408 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
PTP4A2-215ENST00000533408 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
PTP4A2-215ENST00000533408 NCAPD3P42695 1498 aa37.98■■■■□ 3.67
PTP4A2-215ENST00000533408 HMGXB3Q12766 1538 aa37.82■■■■□ 3.64
PTP4A2-215ENST00000533408 BAZ1BQ9UIG0 1483 aaKnown RBP37.81■■■■□ 3.64
PTP4A2-215ENST00000533408 WIZO95785 1651 aa37.8■■■■□ 3.64
PTP4A2-215ENST00000533408 SUPT5HO00267 1087 aaKnown RBP37.71■■■■□ 3.63
PTP4A2-215ENST00000533408 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
PTP4A2-215ENST00000533408 CCDC88BA6NC98 1476 aa37.11■■■■□ 3.53
PTP4A2-215ENST00000533408 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
PTP4A2-215ENST00000533408 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
PTP4A2-215ENST00000533408 CFTRP13569 1480 aa36.81■■■■□ 3.48
PTP4A2-215ENST00000533408 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
PTP4A2-215ENST00000533408 NESP48681 1621 aa36.68■■■■□ 3.46
PTP4A2-215ENST00000533408 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
PTP4A2-215ENST00000533408 PRDM2Q13029 1718 aa36.45■■■■□ 3.43
PTP4A2-215ENST00000533408 FANCD2Q9BXW9 1451 aa36.45■■■■□ 3.43
PTP4A2-215ENST00000533408 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
PTP4A2-215ENST00000533408 KIF21AQ7Z4S6 1674 aa36.24■■■■□ 3.39
PTP4A2-215ENST00000533408 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
PTP4A2-215ENST00000533408 ABCC8Q09428 1581 aa36.14■■■■□ 3.38
PTP4A2-215ENST00000533408 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
PTP4A2-215ENST00000533408 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
PTP4A2-215ENST00000533408 WDR62O43379 1518 aa35.97■■■■□ 3.35
PTP4A2-215ENST00000533408 URB2Q14146 1524 aaKnown RBP35.95■■■■□ 3.35
PTP4A2-215ENST00000533408 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
PTP4A2-215ENST00000533408 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
PTP4A2-215ENST00000533408 CUX2O14529 1486 aa35.86■■■■□ 3.33
PTP4A2-215ENST00000533408 CUX1P39880 1505 aa35.83■■■■□ 3.33
PTP4A2-215ENST00000533408 TOP2BQ02880 1626 aa35.75■■■■□ 3.31
PTP4A2-215ENST00000533408 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
PTP4A2-215ENST00000533408 BIVM-ERCC5R4GMW8 1640 aa35.7■■■■□ 3.31
PTP4A2-215ENST00000533408 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
PTP4A2-215ENST00000533408 FGD5Q6ZNL6 1462 aa35.65■■■■□ 3.3
PTP4A2-215ENST00000533408 POLA1P09884 1462 aaPredicted RBP35.64■■■■□ 3.3
PTP4A2-215ENST00000533408 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
PTP4A2-215ENST00000533408 SOGA1O94964 1423 aa35.6■■■■□ 3.29
PTP4A2-215ENST00000533408 CHIC1Q5VXU3 224 aa35.57■■■■□ 3.28
PTP4A2-215ENST00000533408 RAD54L2Q9Y4B4 1467 aa35.43■■■■□ 3.26
PTP4A2-215ENST00000533408 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
PTP4A2-215ENST00000533408 ABCA10Q8WWZ4 1543 aa35.39■■■■□ 3.26
PTP4A2-215ENST00000533408 WDR97A6NE52 1622 aa35.32■■■■□ 3.25
PTP4A2-215ENST00000533408 TDRD9Q8NDG6 1382 aaKnown RBP35.25■■■■□ 3.23
PTP4A2-215ENST00000533408 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
PTP4A2-215ENST00000533408 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
PTP4A2-215ENST00000533408 AQRO60306 1485 aaKnown RBP eCLIP35.18■■■■□ 3.221e-9■□□□□ 8.5
PTP4A2-215ENST00000533408 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
PTP4A2-215ENST00000533408 EIF4G3O43432 1585 aaKnown RBP35.13■■■■□ 3.21
PTP4A2-215ENST00000533408 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
PTP4A2-215ENST00000533408 ABCA5Q8WWZ7 1642 aa35.09■■■■□ 3.21
PTP4A2-215ENST00000533408 EEA1Q15075 1411 aa35.07■■■■□ 3.21
PTP4A2-215ENST00000533408 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.19
PTP4A2-215ENST00000533408 MAGI1Q96QZ7 1491 aaPredicted RBP34.95■■■■□ 3.19
PTP4A2-215ENST00000533408 IGF1RP08069 1367 aa34.94■■■■□ 3.18
PTP4A2-215ENST00000533408 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
PTP4A2-215ENST00000533408 CSRNP3Q8WYN3 585 aa34.88■■■■□ 3.17
PTP4A2-215ENST00000533408 RUSC2Q8N2Y8 1516 aa34.87■■■■□ 3.17
PTP4A2-215ENST00000533408 SNAPC4Q5SXM2 1469 aa34.87■■■■□ 3.17
PTP4A2-215ENST00000533408 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
PTP4A2-215ENST00000533408 CHMP7Q8WUX9 453 aaPredicted RBP34.82■■■■□ 3.16
PTP4A2-215ENST00000533408 FAM9AQ8IZU1 332 aaPredicted RBP34.8■■■■□ 3.16
PTP4A2-215ENST00000533408 CARMIL1Q5VZK9 1371 aa34.79■■■■□ 3.16
PTP4A2-215ENST00000533408 CUL7Q14999 1698 aa34.79■■■■□ 3.16
PTP4A2-215ENST00000533408 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
PTP4A2-215ENST00000533408 FBLN2P98095 1184 aa34.76■■■■□ 3.16
PTP4A2-215ENST00000533408 ADAMTS12P58397 1594 aa34.71■■■■□ 3.15
PTP4A2-215ENST00000533408 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
PTP4A2-215ENST00000533408 PRXQ9BXM0 1461 aa34.62■■■■□ 3.13
PTP4A2-215ENST00000533408 GRIN2AQ12879 1464 aa34.6■■■■□ 3.13
PTP4A2-215ENST00000533408 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
PTP4A2-215ENST00000533408 CHD1O14646 1710 aa34.5■■■■□ 3.11
PTP4A2-215ENST00000533408 KIF21BO75037 1637 aa34.48■■■■□ 3.11
PTP4A2-215ENST00000533408 NUP160Q12769 1436 aa34.42■■■■□ 3.1
PTP4A2-215ENST00000533408 GOLGA3Q08378 1498 aa34.39■■■■□ 3.1
PTP4A2-215ENST00000533408 UBTFP17480 764 aaKnown RBP34.34■■■■□ 3.09
PTP4A2-215ENST00000533408 KIAA0586Q9BVV6 1533 aa34.32■■■■□ 3.08
PTP4A2-215ENST00000533408 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms