RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
SHANK2-214ENST00000468619 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
SHANK2-214ENST00000468619 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
SHANK2-214ENST00000468619 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
SHANK2-214ENST00000468619 ABCC9O60706 1549 aa22.8■■□□□ 1.24
SHANK2-214ENST00000468619 HRCP23327 699 aa22.72■■□□□ 1.23
SHANK2-214ENST00000468619 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
SHANK2-214ENST00000468619 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
SHANK2-214ENST00000468619 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
SHANK2-214ENST00000468619 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SHANK2-214ENST00000468619 NACADO15069 1562 aa22.27■■□□□ 1.16
SHANK2-214ENST00000468619 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
SHANK2-214ENST00000468619 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
SHANK2-214ENST00000468619 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
SHANK2-214ENST00000468619 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
SHANK2-214ENST00000468619 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
SHANK2-214ENST00000468619 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
SHANK2-214ENST00000468619 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
SHANK2-214ENST00000468619 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
SHANK2-214ENST00000468619 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHANK2-214ENST00000468619 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
SHANK2-214ENST00000468619 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.02
SHANK2-214ENST00000468619 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
SHANK2-214ENST00000468619 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
SHANK2-214ENST00000468619 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
SHANK2-214ENST00000468619 MYT1Q01538 1121 aa21.27■■□□□ 1
SHANK2-214ENST00000468619 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
SHANK2-214ENST00000468619 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
SHANK2-214ENST00000468619 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
SHANK2-214ENST00000468619 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SHANK2-214ENST00000468619 WIZO95785 1651 aa21.1■□□□□ 0.97
SHANK2-214ENST00000468619 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
SHANK2-214ENST00000468619 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
SHANK2-214ENST00000468619 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
SHANK2-214ENST00000468619 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
SHANK2-214ENST00000468619 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
SHANK2-214ENST00000468619 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
SHANK2-214ENST00000468619 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
SHANK2-214ENST00000468619 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
SHANK2-214ENST00000468619 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
SHANK2-214ENST00000468619 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
SHANK2-214ENST00000468619 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
SHANK2-214ENST00000468619 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
SHANK2-214ENST00000468619 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
SHANK2-214ENST00000468619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
SHANK2-214ENST00000468619 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
SHANK2-214ENST00000468619 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
SHANK2-214ENST00000468619 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
SHANK2-214ENST00000468619 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
SHANK2-214ENST00000468619 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-214ENST00000468619 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
SHANK2-214ENST00000468619 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
SHANK2-214ENST00000468619 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
SHANK2-214ENST00000468619 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SHANK2-214ENST00000468619 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-214ENST00000468619 CFTRP13569 1480 aa20.1■□□□□ 0.81
SHANK2-214ENST00000468619 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.8
SHANK2-214ENST00000468619 MIER1Q8N108 512 aa20.06■□□□□ 0.8
SHANK2-214ENST00000468619 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
SHANK2-214ENST00000468619 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SHANK2-214ENST00000468619 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SHANK2-214ENST00000468619 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
SHANK2-214ENST00000468619 NESP48681 1621 aa20■□□□□ 0.79
SHANK2-214ENST00000468619 SYNJ1O43426 1573 aa20■□□□□ 0.79
SHANK2-214ENST00000468619 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
SHANK2-214ENST00000468619 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
SHANK2-214ENST00000468619 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
SHANK2-214ENST00000468619 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
SHANK2-214ENST00000468619 CUX1P39880 1505 aa19.85■□□□□ 0.77
SHANK2-214ENST00000468619 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
SHANK2-214ENST00000468619 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.76
SHANK2-214ENST00000468619 SOGA1O94964 1423 aa19.81■□□□□ 0.76
SHANK2-214ENST00000468619 TSHZ2Q9NRE2 1034 aa19.8■□□□□ 0.76
SHANK2-214ENST00000468619 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
SHANK2-214ENST00000468619 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
SHANK2-214ENST00000468619 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
SHANK2-214ENST00000468619 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
SHANK2-214ENST00000468619 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
SHANK2-214ENST00000468619 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
SHANK2-214ENST00000468619 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
SHANK2-214ENST00000468619 TOPBP1Q92547 1522 aa19.64■□□□□ 0.74
SHANK2-214ENST00000468619 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
SHANK2-214ENST00000468619 EEA1Q15075 1411 aa19.62■□□□□ 0.73
SHANK2-214ENST00000468619 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
SHANK2-214ENST00000468619 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
SHANK2-214ENST00000468619 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SHANK2-214ENST00000468619 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
SHANK2-214ENST00000468619 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
SHANK2-214ENST00000468619 CEP162Q5TB80 1403 aa19.52■□□□□ 0.72
SHANK2-214ENST00000468619 CUX2O14529 1486 aa19.52■□□□□ 0.71
SHANK2-214ENST00000468619 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
SHANK2-214ENST00000468619 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
SHANK2-214ENST00000468619 BCANQ96GW7 911 aa19.48■□□□□ 0.71
SHANK2-214ENST00000468619 KIF21BO75037 1637 aa19.43■□□□□ 0.7
SHANK2-214ENST00000468619 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
SHANK2-214ENST00000468619 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
SHANK2-214ENST00000468619 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
SHANK2-214ENST00000468619 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
SHANK2-214ENST00000468619 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
SHANK2-214ENST00000468619 WDR62O43379 1518 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms