RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
SHANK2-214ENST00000468619 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
SHANK2-214ENST00000468619 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
SHANK2-214ENST00000468619 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
SHANK2-214ENST00000468619 ABCC9O60706 1549 aa22.8■■□□□ 1.24
SHANK2-214ENST00000468619 HRCP23327 699 aa22.72■■□□□ 1.23
SHANK2-214ENST00000468619 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
SHANK2-214ENST00000468619 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
SHANK2-214ENST00000468619 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
SHANK2-214ENST00000468619 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SHANK2-214ENST00000468619 NACADO15069 1562 aa22.27■■□□□ 1.16
SHANK2-214ENST00000468619 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
SHANK2-214ENST00000468619 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
SHANK2-214ENST00000468619 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
SHANK2-214ENST00000468619 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
SHANK2-214ENST00000468619 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
SHANK2-214ENST00000468619 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
SHANK2-214ENST00000468619 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
SHANK2-214ENST00000468619 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
SHANK2-214ENST00000468619 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHANK2-214ENST00000468619 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
SHANK2-214ENST00000468619 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.02
SHANK2-214ENST00000468619 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
SHANK2-214ENST00000468619 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
SHANK2-214ENST00000468619 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
SHANK2-214ENST00000468619 MYT1Q01538 1121 aa21.27■■□□□ 1
SHANK2-214ENST00000468619 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
SHANK2-214ENST00000468619 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
SHANK2-214ENST00000468619 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
SHANK2-214ENST00000468619 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SHANK2-214ENST00000468619 WIZO95785 1651 aa21.1■□□□□ 0.97
SHANK2-214ENST00000468619 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
SHANK2-214ENST00000468619 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
SHANK2-214ENST00000468619 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
SHANK2-214ENST00000468619 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
SHANK2-214ENST00000468619 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
SHANK2-214ENST00000468619 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
SHANK2-214ENST00000468619 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
SHANK2-214ENST00000468619 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
SHANK2-214ENST00000468619 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
SHANK2-214ENST00000468619 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
SHANK2-214ENST00000468619 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
SHANK2-214ENST00000468619 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
SHANK2-214ENST00000468619 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
SHANK2-214ENST00000468619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
SHANK2-214ENST00000468619 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
SHANK2-214ENST00000468619 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
SHANK2-214ENST00000468619 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
SHANK2-214ENST00000468619 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
SHANK2-214ENST00000468619 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-214ENST00000468619 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
SHANK2-214ENST00000468619 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
SHANK2-214ENST00000468619 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
SHANK2-214ENST00000468619 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SHANK2-214ENST00000468619 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-214ENST00000468619 CFTRP13569 1480 aa20.1■□□□□ 0.81
SHANK2-214ENST00000468619 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.8
SHANK2-214ENST00000468619 MIER1Q8N108 512 aa20.06■□□□□ 0.8
SHANK2-214ENST00000468619 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
SHANK2-214ENST00000468619 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SHANK2-214ENST00000468619 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SHANK2-214ENST00000468619 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
SHANK2-214ENST00000468619 NESP48681 1621 aa20■□□□□ 0.79
SHANK2-214ENST00000468619 SYNJ1O43426 1573 aa20■□□□□ 0.79
SHANK2-214ENST00000468619 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
SHANK2-214ENST00000468619 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
SHANK2-214ENST00000468619 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
SHANK2-214ENST00000468619 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
SHANK2-214ENST00000468619 CUX1P39880 1505 aa19.85■□□□□ 0.77
SHANK2-214ENST00000468619 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
SHANK2-214ENST00000468619 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.76
SHANK2-214ENST00000468619 SOGA1O94964 1423 aa19.81■□□□□ 0.76
SHANK2-214ENST00000468619 TSHZ2Q9NRE2 1034 aa19.8■□□□□ 0.76
SHANK2-214ENST00000468619 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
SHANK2-214ENST00000468619 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
SHANK2-214ENST00000468619 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
SHANK2-214ENST00000468619 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
SHANK2-214ENST00000468619 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
SHANK2-214ENST00000468619 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
SHANK2-214ENST00000468619 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
SHANK2-214ENST00000468619 TOPBP1Q92547 1522 aa19.64■□□□□ 0.74
SHANK2-214ENST00000468619 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
SHANK2-214ENST00000468619 EEA1Q15075 1411 aa19.62■□□□□ 0.73
SHANK2-214ENST00000468619 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
SHANK2-214ENST00000468619 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
SHANK2-214ENST00000468619 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SHANK2-214ENST00000468619 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
SHANK2-214ENST00000468619 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
SHANK2-214ENST00000468619 CEP162Q5TB80 1403 aa19.52■□□□□ 0.72
SHANK2-214ENST00000468619 CUX2O14529 1486 aa19.52■□□□□ 0.71
SHANK2-214ENST00000468619 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
SHANK2-214ENST00000468619 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
SHANK2-214ENST00000468619 BCANQ96GW7 911 aa19.48■□□□□ 0.71
SHANK2-214ENST00000468619 KIF21BO75037 1637 aa19.43■□□□□ 0.7
SHANK2-214ENST00000468619 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
SHANK2-214ENST00000468619 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
SHANK2-214ENST00000468619 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
SHANK2-214ENST00000468619 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
SHANK2-214ENST00000468619 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
SHANK2-214ENST00000468619 WDR62O43379 1518 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms