RNA–Protein interactions for RNA: ENST00000526960.1

PTP4A2-209, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-209ENST00000526960 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
PTP4A2-209ENST00000526960 ABCC9O60706 1549 aa32.94■■■□□ 2.86
PTP4A2-209ENST00000526960 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
PTP4A2-209ENST00000526960 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
PTP4A2-209ENST00000526960 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
PTP4A2-209ENST00000526960 NACADO15069 1562 aa31.09■■■□□ 2.57
PTP4A2-209ENST00000526960 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
PTP4A2-209ENST00000526960 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
PTP4A2-209ENST00000526960 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
PTP4A2-209ENST00000526960 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
PTP4A2-209ENST00000526960 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
PTP4A2-209ENST00000526960 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
PTP4A2-209ENST00000526960 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
PTP4A2-209ENST00000526960 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
PTP4A2-209ENST00000526960 CECR2Q9BXF3 1484 aa29.76■■■□□ 2.35
PTP4A2-209ENST00000526960 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
PTP4A2-209ENST00000526960 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
PTP4A2-209ENST00000526960 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
PTP4A2-209ENST00000526960 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
PTP4A2-209ENST00000526960 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
PTP4A2-209ENST00000526960 CUX2O14529 1486 aa28.59■■■□□ 2.17
PTP4A2-209ENST00000526960 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
PTP4A2-209ENST00000526960 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
PTP4A2-209ENST00000526960 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
PTP4A2-209ENST00000526960 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
PTP4A2-209ENST00000526960 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
PTP4A2-209ENST00000526960 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
PTP4A2-209ENST00000526960 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
PTP4A2-209ENST00000526960 NESP48681 1621 aa28.22■■■□□ 2.11
PTP4A2-209ENST00000526960 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
PTP4A2-209ENST00000526960 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
PTP4A2-209ENST00000526960 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
PTP4A2-209ENST00000526960 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
PTP4A2-209ENST00000526960 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
PTP4A2-209ENST00000526960 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
PTP4A2-209ENST00000526960 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
PTP4A2-209ENST00000526960 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
PTP4A2-209ENST00000526960 WIZO95785 1651 aa27.6■■■□□ 2.01
PTP4A2-209ENST00000526960 WDR62O43379 1518 aa27.59■■■□□ 2.01
PTP4A2-209ENST00000526960 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
PTP4A2-209ENST00000526960 CFTRP13569 1480 aa27.48■■□□□ 1.99
PTP4A2-209ENST00000526960 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
PTP4A2-209ENST00000526960 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
PTP4A2-209ENST00000526960 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
PTP4A2-209ENST00000526960 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
PTP4A2-209ENST00000526960 TOP2AP11388 1531 aaKnown RBP27.29■■□□□ 1.96
PTP4A2-209ENST00000526960 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
PTP4A2-209ENST00000526960 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
PTP4A2-209ENST00000526960 IFT140Q96RY7 1462 aa27■■□□□ 1.91
PTP4A2-209ENST00000526960 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
PTP4A2-209ENST00000526960 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
PTP4A2-209ENST00000526960 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
PTP4A2-209ENST00000526960 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
PTP4A2-209ENST00000526960 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
PTP4A2-209ENST00000526960 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
PTP4A2-209ENST00000526960 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
PTP4A2-209ENST00000526960 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
PTP4A2-209ENST00000526960 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
PTP4A2-209ENST00000526960 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.861e-9■□□□□ 8.5
PTP4A2-209ENST00000526960 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
PTP4A2-209ENST00000526960 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
PTP4A2-209ENST00000526960 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
PTP4A2-209ENST00000526960 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
PTP4A2-209ENST00000526960 SOGA1O94964 1423 aa26.56■■□□□ 1.84
PTP4A2-209ENST00000526960 FBLN2P98095 1184 aa26.55■■□□□ 1.84
PTP4A2-209ENST00000526960 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
PTP4A2-209ENST00000526960 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
PTP4A2-209ENST00000526960 CHD1O14646 1710 aa26.49■■□□□ 1.83
PTP4A2-209ENST00000526960 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
PTP4A2-209ENST00000526960 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
PTP4A2-209ENST00000526960 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
PTP4A2-209ENST00000526960 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
PTP4A2-209ENST00000526960 TRHP20396 242 aaPredicted RBP26.38■■□□□ 1.81
PTP4A2-209ENST00000526960 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
PTP4A2-209ENST00000526960 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
PTP4A2-209ENST00000526960 CUX1P39880 1505 aa26.33■■□□□ 1.81
PTP4A2-209ENST00000526960 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
PTP4A2-209ENST00000526960 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
PTP4A2-209ENST00000526960 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
PTP4A2-209ENST00000526960 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
PTP4A2-209ENST00000526960 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
PTP4A2-209ENST00000526960 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
PTP4A2-209ENST00000526960 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
PTP4A2-209ENST00000526960 PBRM1Q86U86 1689 aa26.03■■□□□ 1.76
PTP4A2-209ENST00000526960 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
PTP4A2-209ENST00000526960 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
PTP4A2-209ENST00000526960 GRIN2AQ12879 1464 aa25.95■■□□□ 1.74
PTP4A2-209ENST00000526960 NUP160Q12769 1436 aa25.93■■□□□ 1.74
PTP4A2-209ENST00000526960 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
PTP4A2-209ENST00000526960 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
PTP4A2-209ENST00000526960 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
PTP4A2-209ENST00000526960 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
PTP4A2-209ENST00000526960 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
PTP4A2-209ENST00000526960 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
PTP4A2-209ENST00000526960 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
PTP4A2-209ENST00000526960 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
PTP4A2-209ENST00000526960 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
PTP4A2-209ENST00000526960 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
PTP4A2-209ENST00000526960 PRG4Q92954 1404 aaPredicted RBP25.67■■□□□ 1.7
PTP4A2-209ENST00000526960 NPM1P06748 294 aaKnown RBP eCLIP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms