RNA–Protein interactions for RNA: ENST00000470759.5

SHANK2-215, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 762 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-215ENST00000470759 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
SHANK2-215ENST00000470759 CCDC180Q9P1Z9 1646 aa40.61■■■■■ 4.09
SHANK2-215ENST00000470759 ABCC9O60706 1549 aa39.71■■■■□ 3.95
SHANK2-215ENST00000470759 RB1CC1Q8TDY2 1594 aa38.23■■■■□ 3.71
SHANK2-215ENST00000470759 NACADO15069 1562 aa38.18■■■■□ 3.7
SHANK2-215ENST00000470759 DCAF8L2P0C7V8 631 aa38.17■■■■□ 3.7
SHANK2-215ENST00000470759 ZCCHC6Q5VYS8 1495 aaKnown RBP38.03■■■■□ 3.68
SHANK2-215ENST00000470759 MYO15BQ96JP2 1530 aa37.93■■■■□ 3.66
SHANK2-215ENST00000470759 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
SHANK2-215ENST00000470759 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
SHANK2-215ENST00000470759 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
SHANK2-215ENST00000470759 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
SHANK2-215ENST00000470759 BICRAQ9NZM4 1560 aa37.02■■■■□ 3.52
SHANK2-215ENST00000470759 SHROOM4Q9ULL8 1493 aa36.68■■■■□ 3.46
SHANK2-215ENST00000470759 DNAJC5BQ9UF47 199 aa36.37■■■■□ 3.41
SHANK2-215ENST00000470759 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.37
SHANK2-215ENST00000470759 CC2D2AQ9P2K1 1620 aa35.92■■■■□ 3.34
SHANK2-215ENST00000470759 CECR2Q9BXF3 1484 aa35.69■■■■□ 3.3
SHANK2-215ENST00000470759 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
SHANK2-215ENST00000470759 BAZ1AQ9NRL2 1556 aaPredicted RBP35.41■■■■□ 3.26
SHANK2-215ENST00000470759 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
SHANK2-215ENST00000470759 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
SHANK2-215ENST00000470759 NCAPD3P42695 1498 aa35.2■■■■□ 3.23
SHANK2-215ENST00000470759 MROH2BQ7Z745 1585 aa35.17■■■■□ 3.22
SHANK2-215ENST00000470759 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
SHANK2-215ENST00000470759 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
SHANK2-215ENST00000470759 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
SHANK2-215ENST00000470759 WIZO95785 1651 aa34.81■■■■□ 3.16
SHANK2-215ENST00000470759 RSF1Q96T23 1441 aaPredicted RBP34.77■■■■□ 3.16
SHANK2-215ENST00000470759 TOP2AP11388 1531 aaKnown RBP34.45■■■■□ 3.11
SHANK2-215ENST00000470759 NESP48681 1621 aa34.35■■■■□ 3.09
SHANK2-215ENST00000470759 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
SHANK2-215ENST00000470759 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
SHANK2-215ENST00000470759 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
SHANK2-215ENST00000470759 PDS5BQ9NTI5 1447 aa34.07■■■■□ 3.04
SHANK2-215ENST00000470759 CCDC88BA6NC98 1476 aa34.02■■■■□ 3.04
SHANK2-215ENST00000470759 CFTRP13569 1480 aa33.98■■■■□ 3.03
SHANK2-215ENST00000470759 KIF21AQ7Z4S6 1674 aa33.97■■■■□ 3.03
SHANK2-215ENST00000470759 SUPT5HO00267 1087 aaKnown RBP33.93■■■■□ 3.02
SHANK2-215ENST00000470759 CUX2O14529 1486 aa33.88■■■■□ 3.01
SHANK2-215ENST00000470759 THOC2Q8NI27 1593 aaKnown RBP33.85■■■■□ 3.01
SHANK2-215ENST00000470759 FANCD2Q9BXW9 1451 aa33.81■■■■□ 3
SHANK2-215ENST00000470759 CEP164Q9UPV0 1460 aa33.77■■■■□ 3
SHANK2-215ENST00000470759 PRDM2Q13029 1718 aa33.76■■■■□ 3
SHANK2-215ENST00000470759 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
SHANK2-215ENST00000470759 WDR62O43379 1518 aa33.59■■■□□ 2.97
SHANK2-215ENST00000470759 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
SHANK2-215ENST00000470759 ABCC8Q09428 1581 aa33.28■■■□□ 2.92
SHANK2-215ENST00000470759 TOPBP1Q92547 1522 aa33.26■■■□□ 2.91
SHANK2-215ENST00000470759 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
SHANK2-215ENST00000470759 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
SHANK2-215ENST00000470759 CUX1P39880 1505 aa33■■■□□ 2.87
SHANK2-215ENST00000470759 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
SHANK2-215ENST00000470759 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
SHANK2-215ENST00000470759 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
SHANK2-215ENST00000470759 ZNF608Q9ULD9 1512 aaPredicted RBP32.88■■■□□ 2.85
SHANK2-215ENST00000470759 SOGA1O94964 1423 aa32.85■■■□□ 2.85
SHANK2-215ENST00000470759 RAD54L2Q9Y4B4 1467 aa32.82■■■□□ 2.84
SHANK2-215ENST00000470759 WRNQ14191 1432 aaPredicted RBP eCLIP32.82■■■□□ 2.84
SHANK2-215ENST00000470759 DNAJC5Q9H3Z4 198 aa32.79■■■□□ 2.84
SHANK2-215ENST00000470759 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
SHANK2-215ENST00000470759 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
SHANK2-215ENST00000470759 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
SHANK2-215ENST00000470759 SYNJ1O43426 1573 aa32.72■■■□□ 2.83
SHANK2-215ENST00000470759 AQRO60306 1485 aaKnown RBP eCLIP32.7■■■□□ 2.83
SHANK2-215ENST00000470759 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
SHANK2-215ENST00000470759 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
SHANK2-215ENST00000470759 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
SHANK2-215ENST00000470759 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
SHANK2-215ENST00000470759 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
SHANK2-215ENST00000470759 OSCARQ8IYS5 282 aa32.47■■■□□ 2.79
SHANK2-215ENST00000470759 ABCA5Q8WWZ7 1642 aa32.45■■■□□ 2.79
SHANK2-215ENST00000470759 PBRM1Q86U86 1689 aa32.42■■■□□ 2.78
SHANK2-215ENST00000470759 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
SHANK2-215ENST00000470759 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
SHANK2-215ENST00000470759 CHD1O14646 1710 aa32.37■■■□□ 2.77
SHANK2-215ENST00000470759 FBLN2P98095 1184 aa32.35■■■□□ 2.77
SHANK2-215ENST00000470759 CHMP7Q8WUX9 453 aaPredicted RBP32.26■■■□□ 2.75
SHANK2-215ENST00000470759 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
SHANK2-215ENST00000470759 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
SHANK2-215ENST00000470759 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
SHANK2-215ENST00000470759 KIF27Q86VH2 1401 aa32.14■■■□□ 2.74
SHANK2-215ENST00000470759 FHAD1B1AJZ9 1412 aa32.1■■■□□ 2.73
SHANK2-215ENST00000470759 TRIM41Q8WV44 630 aa32.06■■■□□ 2.72
SHANK2-215ENST00000470759 GRIN2AQ12879 1464 aa32.04■■■□□ 2.72
SHANK2-215ENST00000470759 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
SHANK2-215ENST00000470759 IGF1RP08069 1367 aa31.96■■■□□ 2.71
SHANK2-215ENST00000470759 RIMBP3CA6NJZ7 1639 aa31.95■■■□□ 2.71
SHANK2-215ENST00000470759 RIMBP3BA6NNM3 1639 aa31.95■■■□□ 2.71
SHANK2-215ENST00000470759 RIMBP3Q9UFD9 1639 aa31.95■■■□□ 2.71
SHANK2-215ENST00000470759 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
SHANK2-215ENST00000470759 CUL7Q14999 1698 aa31.94■■■□□ 2.7
SHANK2-215ENST00000470759 NUP160Q12769 1436 aa31.89■■■□□ 2.7
SHANK2-215ENST00000470759 CEP170Q5SW79 1584 aa31.88■■■□□ 2.69
SHANK2-215ENST00000470759 CARMIL1Q5VZK9 1371 aa31.8■■■□□ 2.68
SHANK2-215ENST00000470759 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
SHANK2-215ENST00000470759 ARAP1Q96P48 1450 aa31.67■■■□□ 2.66
SHANK2-215ENST00000470759 SHROOM2Q13796 1616 aa31.66■■■□□ 2.66
SHANK2-215ENST00000470759 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
SHANK2-215ENST00000470759 CHIC1Q5VXU3 224 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms