RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-208ENST00000469882 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
FXR1-208ENST00000469882 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
FXR1-208ENST00000469882 ABCC9O60706 1549 aa24.72■■□□□ 1.55
FXR1-208ENST00000469882 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
FXR1-208ENST00000469882 NACADO15069 1562 aa23.55■■□□□ 1.36
FXR1-208ENST00000469882 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
FXR1-208ENST00000469882 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
FXR1-208ENST00000469882 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
FXR1-208ENST00000469882 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
FXR1-208ENST00000469882 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
FXR1-208ENST00000469882 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
FXR1-208ENST00000469882 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
FXR1-208ENST00000469882 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
FXR1-208ENST00000469882 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
FXR1-208ENST00000469882 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
FXR1-208ENST00000469882 EIF4G1Q04637 1599 aaKnown RBP22.38■■□□□ 1.17
FXR1-208ENST00000469882 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
FXR1-208ENST00000469882 CECR2Q9BXF3 1484 aa22.23■■□□□ 1.15
FXR1-208ENST00000469882 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
FXR1-208ENST00000469882 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
FXR1-208ENST00000469882 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
FXR1-208ENST00000469882 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
FXR1-208ENST00000469882 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
FXR1-208ENST00000469882 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
FXR1-208ENST00000469882 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
FXR1-208ENST00000469882 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
FXR1-208ENST00000469882 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
FXR1-208ENST00000469882 WIZO95785 1651 aa21.35■■□□□ 1.01
FXR1-208ENST00000469882 NESP48681 1621 aa21.34■■□□□ 1.01
FXR1-208ENST00000469882 ERCC6Q03468 1493 aa21.31■■□□□ 1
FXR1-208ENST00000469882 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
FXR1-208ENST00000469882 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
FXR1-208ENST00000469882 CUX2O14529 1486 aa21.18■□□□□ 0.98
FXR1-208ENST00000469882 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
FXR1-208ENST00000469882 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
FXR1-208ENST00000469882 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
FXR1-208ENST00000469882 CADPSQ9ULU8 1353 aa21.07■□□□□ 0.96
FXR1-208ENST00000469882 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
FXR1-208ENST00000469882 CFTRP13569 1480 aa20.91■□□□□ 0.94
FXR1-208ENST00000469882 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
FXR1-208ENST00000469882 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
FXR1-208ENST00000469882 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
FXR1-208ENST00000469882 WDR62O43379 1518 aa20.84■□□□□ 0.93
FXR1-208ENST00000469882 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
FXR1-208ENST00000469882 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
FXR1-208ENST00000469882 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
FXR1-208ENST00000469882 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
FXR1-208ENST00000469882 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
FXR1-208ENST00000469882 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
FXR1-208ENST00000469882 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
FXR1-208ENST00000469882 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
FXR1-208ENST00000469882 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
FXR1-208ENST00000469882 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
FXR1-208ENST00000469882 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
FXR1-208ENST00000469882 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
FXR1-208ENST00000469882 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
FXR1-208ENST00000469882 CUX1P39880 1505 aa20.27■□□□□ 0.84
FXR1-208ENST00000469882 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
FXR1-208ENST00000469882 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
FXR1-208ENST00000469882 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.837e-8■■■■□ 23.5
FXR1-208ENST00000469882 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
FXR1-208ENST00000469882 SOGA1O94964 1423 aa20.18■□□□□ 0.82
FXR1-208ENST00000469882 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
FXR1-208ENST00000469882 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
FXR1-208ENST00000469882 CHD1O14646 1710 aa20.11■□□□□ 0.81
FXR1-208ENST00000469882 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
FXR1-208ENST00000469882 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
FXR1-208ENST00000469882 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
FXR1-208ENST00000469882 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
FXR1-208ENST00000469882 TOP2BQ02880 1626 aa20.02■□□□□ 0.79
FXR1-208ENST00000469882 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
FXR1-208ENST00000469882 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
FXR1-208ENST00000469882 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
FXR1-208ENST00000469882 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
FXR1-208ENST00000469882 PBRM1Q86U86 1689 aa20■□□□□ 0.79
FXR1-208ENST00000469882 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
FXR1-208ENST00000469882 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
FXR1-208ENST00000469882 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
FXR1-208ENST00000469882 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
FXR1-208ENST00000469882 FBLN2P98095 1184 aa19.96■□□□□ 0.79
FXR1-208ENST00000469882 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
FXR1-208ENST00000469882 ARHGEF11O15085 1522 aa19.96■□□□□ 0.79
FXR1-208ENST00000469882 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
FXR1-208ENST00000469882 CLASP1Q7Z460 1538 aa19.88■□□□□ 0.77
FXR1-208ENST00000469882 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
FXR1-208ENST00000469882 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
FXR1-208ENST00000469882 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
FXR1-208ENST00000469882 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
FXR1-208ENST00000469882 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
FXR1-208ENST00000469882 FHAD1B1AJZ9 1412 aa19.71■□□□□ 0.75
FXR1-208ENST00000469882 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
FXR1-208ENST00000469882 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
FXR1-208ENST00000469882 NUP160Q12769 1436 aa19.68■□□□□ 0.74
FXR1-208ENST00000469882 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
FXR1-208ENST00000469882 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
FXR1-208ENST00000469882 KIF27Q86VH2 1401 aa19.58■□□□□ 0.72
FXR1-208ENST00000469882 IGF1RP08069 1367 aa19.55■□□□□ 0.72
FXR1-208ENST00000469882 CUL7Q14999 1698 aa19.54■□□□□ 0.72
FXR1-208ENST00000469882 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
FXR1-208ENST00000469882 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms