RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
FXR1-221ENST00000491674 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
FXR1-221ENST00000491674 ABCC9O60706 1549 aa32.09■■■□□ 2.73
FXR1-221ENST00000491674 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
FXR1-221ENST00000491674 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
FXR1-221ENST00000491674 DCAF1Q9Y4B6 1507 aa31.18■■■□□ 2.58
FXR1-221ENST00000491674 NACADO15069 1562 aa31.16■■■□□ 2.58
FXR1-221ENST00000491674 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.57
FXR1-221ENST00000491674 RB1CC1Q8TDY2 1594 aa31.07■■■□□ 2.56
FXR1-221ENST00000491674 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
FXR1-221ENST00000491674 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
FXR1-221ENST00000491674 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
FXR1-221ENST00000491674 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
FXR1-221ENST00000491674 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
FXR1-221ENST00000491674 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
FXR1-221ENST00000491674 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
FXR1-221ENST00000491674 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
FXR1-221ENST00000491674 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
FXR1-221ENST00000491674 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
FXR1-221ENST00000491674 DNAJC5BQ9UF47 199 aa28.99■■■□□ 2.23
FXR1-221ENST00000491674 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
FXR1-221ENST00000491674 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
FXR1-221ENST00000491674 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
FXR1-221ENST00000491674 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
FXR1-221ENST00000491674 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
FXR1-221ENST00000491674 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
FXR1-221ENST00000491674 WIZO95785 1651 aa28.67■■■□□ 2.18
FXR1-221ENST00000491674 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
FXR1-221ENST00000491674 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
FXR1-221ENST00000491674 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
FXR1-221ENST00000491674 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
FXR1-221ENST00000491674 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
FXR1-221ENST00000491674 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
FXR1-221ENST00000491674 CFTRP13569 1480 aa27.89■■■□□ 2.06
FXR1-221ENST00000491674 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.05
FXR1-221ENST00000491674 NESP48681 1621 aa27.87■■■□□ 2.05
FXR1-221ENST00000491674 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
FXR1-221ENST00000491674 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
FXR1-221ENST00000491674 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
FXR1-221ENST00000491674 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
FXR1-221ENST00000491674 PRDM2Q13029 1718 aa27.53■■■□□ 2
FXR1-221ENST00000491674 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
FXR1-221ENST00000491674 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
FXR1-221ENST00000491674 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
FXR1-221ENST00000491674 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
FXR1-221ENST00000491674 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
FXR1-221ENST00000491674 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
FXR1-221ENST00000491674 WDR62O43379 1518 aa27.25■■□□□ 1.95
FXR1-221ENST00000491674 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
FXR1-221ENST00000491674 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
FXR1-221ENST00000491674 CUX1P39880 1505 aa27.19■■□□□ 1.94
FXR1-221ENST00000491674 CUX2O14529 1486 aa27.15■■□□□ 1.94
FXR1-221ENST00000491674 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
FXR1-221ENST00000491674 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
FXR1-221ENST00000491674 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
FXR1-221ENST00000491674 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
FXR1-221ENST00000491674 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
FXR1-221ENST00000491674 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
FXR1-221ENST00000491674 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
FXR1-221ENST00000491674 SOGA1O94964 1423 aa26.99■■□□□ 1.91
FXR1-221ENST00000491674 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
FXR1-221ENST00000491674 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
FXR1-221ENST00000491674 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
FXR1-221ENST00000491674 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
FXR1-221ENST00000491674 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
FXR1-221ENST00000491674 AEBP2Q6ZN18 517 aaPredicted RBP26.76■■□□□ 1.87
FXR1-221ENST00000491674 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
FXR1-221ENST00000491674 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.87
FXR1-221ENST00000491674 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
FXR1-221ENST00000491674 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
FXR1-221ENST00000491674 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
FXR1-221ENST00000491674 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
FXR1-221ENST00000491674 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
FXR1-221ENST00000491674 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
FXR1-221ENST00000491674 EEA1Q15075 1411 aa26.53■■□□□ 1.84
FXR1-221ENST00000491674 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
FXR1-221ENST00000491674 IGF1RP08069 1367 aa26.51■■□□□ 1.83
FXR1-221ENST00000491674 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
FXR1-221ENST00000491674 FAM9AQ8IZU1 332 aaPredicted RBP26.47■■□□□ 1.83
FXR1-221ENST00000491674 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
FXR1-221ENST00000491674 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
FXR1-221ENST00000491674 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.82
FXR1-221ENST00000491674 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
FXR1-221ENST00000491674 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
FXR1-221ENST00000491674 FHAD1B1AJZ9 1412 aa26.4■■□□□ 1.82
FXR1-221ENST00000491674 FBLN2P98095 1184 aa26.4■■□□□ 1.82
FXR1-221ENST00000491674 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
FXR1-221ENST00000491674 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
FXR1-221ENST00000491674 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
FXR1-221ENST00000491674 CUL7Q14999 1698 aa26.31■■□□□ 1.8
FXR1-221ENST00000491674 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
FXR1-221ENST00000491674 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
FXR1-221ENST00000491674 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
FXR1-221ENST00000491674 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
FXR1-221ENST00000491674 CHD1O14646 1710 aa26.14■■□□□ 1.77
FXR1-221ENST00000491674 KIF21BO75037 1637 aa26.1■■□□□ 1.77
FXR1-221ENST00000491674 NUP160Q12769 1436 aa26.09■■□□□ 1.77
FXR1-221ENST00000491674 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
FXR1-221ENST00000491674 GOLGA3Q08378 1498 aa26.07■■□□□ 1.76
FXR1-221ENST00000491674 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms