RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.97
FXR1-203ENST00000445140 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
FXR1-203ENST00000445140 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
FXR1-203ENST00000445140 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
FXR1-203ENST00000445140 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
FXR1-203ENST00000445140 ABCC9O60706 1549 aa17.58■□□□□ 0.41
FXR1-203ENST00000445140 NACADO15069 1562 aa17.5■□□□□ 0.39
FXR1-203ENST00000445140 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
FXR1-203ENST00000445140 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.31
FXR1-203ENST00000445140 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
FXR1-203ENST00000445140 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
FXR1-203ENST00000445140 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
FXR1-203ENST00000445140 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
FXR1-203ENST00000445140 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
FXR1-203ENST00000445140 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
FXR1-203ENST00000445140 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
FXR1-203ENST00000445140 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
FXR1-203ENST00000445140 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
FXR1-203ENST00000445140 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
FXR1-203ENST00000445140 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
FXR1-203ENST00000445140 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
FXR1-203ENST00000445140 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
FXR1-203ENST00000445140 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
FXR1-203ENST00000445140 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
FXR1-203ENST00000445140 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
FXR1-203ENST00000445140 NCAPD3P42695 1498 aa16.08■□□□□ 0.16
FXR1-203ENST00000445140 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
FXR1-203ENST00000445140 WIZO95785 1651 aa16■□□□□ 0.15
FXR1-203ENST00000445140 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
FXR1-203ENST00000445140 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
FXR1-203ENST00000445140 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
FXR1-203ENST00000445140 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
FXR1-203ENST00000445140 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
FXR1-203ENST00000445140 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
FXR1-203ENST00000445140 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
FXR1-203ENST00000445140 CFTRP13569 1480 aa15.58■□□□□ 0.08
FXR1-203ENST00000445140 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
FXR1-203ENST00000445140 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
FXR1-203ENST00000445140 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
FXR1-203ENST00000445140 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
FXR1-203ENST00000445140 NESP48681 1621 aa15.34■□□□□ 0.05
FXR1-203ENST00000445140 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
FXR1-203ENST00000445140 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
FXR1-203ENST00000445140 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
FXR1-203ENST00000445140 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
FXR1-203ENST00000445140 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
FXR1-203ENST00000445140 WDR62O43379 1518 aa15.27■□□□□ 0.04
FXR1-203ENST00000445140 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
FXR1-203ENST00000445140 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
FXR1-203ENST00000445140 TOP2BQ02880 1626 aa15.23■□□□□ 0.03
FXR1-203ENST00000445140 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
FXR1-203ENST00000445140 CUX1P39880 1505 aa15.17■□□□□ 0.02
FXR1-203ENST00000445140 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
FXR1-203ENST00000445140 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
FXR1-203ENST00000445140 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
FXR1-203ENST00000445140 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
FXR1-203ENST00000445140 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
FXR1-203ENST00000445140 CUX2O14529 1486 aa15.13■□□□□ 0.01
FXR1-203ENST00000445140 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
FXR1-203ENST00000445140 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
FXR1-203ENST00000445140 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
FXR1-203ENST00000445140 IFT140Q96RY7 1462 aa15.02■□□□□ -0
FXR1-203ENST00000445140 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
FXR1-203ENST00000445140 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
FXR1-203ENST00000445140 EEA1Q15075 1411 aa14.92□□□□□ -0.02
FXR1-203ENST00000445140 SOGA1O94964 1423 aa14.9□□□□□ -0.02
FXR1-203ENST00000445140 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
FXR1-203ENST00000445140 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
FXR1-203ENST00000445140 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
FXR1-203ENST00000445140 CUL7Q14999 1698 aa14.85□□□□□ -0.03
FXR1-203ENST00000445140 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
FXR1-203ENST00000445140 KIF27Q86VH2 1401 aa14.83□□□□□ -0.04
FXR1-203ENST00000445140 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
FXR1-203ENST00000445140 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
FXR1-203ENST00000445140 GRIN2BQ13224 1484 aa14.79□□□□□ -0.04
FXR1-203ENST00000445140 GAPVD1Q14C86 1478 aa14.79□□□□□ -0.04
FXR1-203ENST00000445140 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
FXR1-203ENST00000445140 ADAMTS12P58397 1594 aa14.77□□□□□ -0.04
FXR1-203ENST00000445140 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
FXR1-203ENST00000445140 KIF21BO75037 1637 aa14.76□□□□□ -0.05
FXR1-203ENST00000445140 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
FXR1-203ENST00000445140 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
FXR1-203ENST00000445140 IGF1RP08069 1367 aa14.68□□□□□ -0.06
FXR1-203ENST00000445140 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.062e-8■■■■□ 23.5
FXR1-203ENST00000445140 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
FXR1-203ENST00000445140 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
FXR1-203ENST00000445140 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
FXR1-203ENST00000445140 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
FXR1-203ENST00000445140 CHD1O14646 1710 aa14.62□□□□□ -0.07
FXR1-203ENST00000445140 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
FXR1-203ENST00000445140 CTTNBP2Q8WZ74 1663 aa14.6□□□□□ -0.07
FXR1-203ENST00000445140 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
FXR1-203ENST00000445140 NUP160Q12769 1436 aa14.58□□□□□ -0.08
FXR1-203ENST00000445140 CARMIL1Q5VZK9 1371 aa14.58□□□□□ -0.08
FXR1-203ENST00000445140 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
FXR1-203ENST00000445140 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
FXR1-203ENST00000445140 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
FXR1-203ENST00000445140 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
FXR1-203ENST00000445140 CEP170Q5SW79 1584 aa14.52□□□□□ -0.09
FXR1-203ENST00000445140 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms