RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
CLPTM1L-216ENST00000630539 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
CLPTM1L-216ENST00000630539 ABCC9O60706 1549 aa32.39■■■□□ 2.78
CLPTM1L-216ENST00000630539 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
CLPTM1L-216ENST00000630539 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
CLPTM1L-216ENST00000630539 DCAF1Q9Y4B6 1507 aa31.61■■■□□ 2.65
CLPTM1L-216ENST00000630539 NACADO15069 1562 aa31.45■■■□□ 2.63
CLPTM1L-216ENST00000630539 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
CLPTM1L-216ENST00000630539 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
CLPTM1L-216ENST00000630539 SCRIBQ14160 1630 aa30.95■■■□□ 2.54
CLPTM1L-216ENST00000630539 SHROOM4Q9ULL8 1493 aa30.94■■■□□ 2.54
CLPTM1L-216ENST00000630539 UNC13AQ9UPW8 1703 aa30.76■■■□□ 2.51
CLPTM1L-216ENST00000630539 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
CLPTM1L-216ENST00000630539 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
CLPTM1L-216ENST00000630539 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
CLPTM1L-216ENST00000630539 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
CLPTM1L-216ENST00000630539 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
CLPTM1L-216ENST00000630539 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
CLPTM1L-216ENST00000630539 EIF4G1Q04637 1599 aaKnown RBP29.58■■■□□ 2.33
CLPTM1L-216ENST00000630539 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
CLPTM1L-216ENST00000630539 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
CLPTM1L-216ENST00000630539 WIZO95785 1651 aa29.36■■■□□ 2.29
CLPTM1L-216ENST00000630539 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
CLPTM1L-216ENST00000630539 ATAD2BQ9ULI0 1458 aa29.22■■■□□ 2.27
CLPTM1L-216ENST00000630539 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
CLPTM1L-216ENST00000630539 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
CLPTM1L-216ENST00000630539 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
CLPTM1L-216ENST00000630539 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
CLPTM1L-216ENST00000630539 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
CLPTM1L-216ENST00000630539 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
CLPTM1L-216ENST00000630539 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
CLPTM1L-216ENST00000630539 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
CLPTM1L-216ENST00000630539 NESP48681 1621 aa28.28■■■□□ 2.12
CLPTM1L-216ENST00000630539 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
CLPTM1L-216ENST00000630539 CFTRP13569 1480 aa28.26■■■□□ 2.11
CLPTM1L-216ENST00000630539 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
CLPTM1L-216ENST00000630539 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
CLPTM1L-216ENST00000630539 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
CLPTM1L-216ENST00000630539 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
CLPTM1L-216ENST00000630539 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
CLPTM1L-216ENST00000630539 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
CLPTM1L-216ENST00000630539 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
CLPTM1L-216ENST00000630539 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
CLPTM1L-216ENST00000630539 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
CLPTM1L-216ENST00000630539 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
CLPTM1L-216ENST00000630539 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
CLPTM1L-216ENST00000630539 CUX1P39880 1505 aa27.72■■■□□ 2.03
CLPTM1L-216ENST00000630539 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
CLPTM1L-216ENST00000630539 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
CLPTM1L-216ENST00000630539 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
CLPTM1L-216ENST00000630539 TOP2BQ02880 1626 aa27.64■■■□□ 2.01
CLPTM1L-216ENST00000630539 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
CLPTM1L-216ENST00000630539 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
CLPTM1L-216ENST00000630539 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
CLPTM1L-216ENST00000630539 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
CLPTM1L-216ENST00000630539 WDR62O43379 1518 aa27.53■■■□□ 2
CLPTM1L-216ENST00000630539 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
CLPTM1L-216ENST00000630539 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.99
CLPTM1L-216ENST00000630539 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
CLPTM1L-216ENST00000630539 CUX2O14529 1486 aa27.33■■□□□ 1.97
CLPTM1L-216ENST00000630539 SOGA1O94964 1423 aa27.32■■□□□ 1.96
CLPTM1L-216ENST00000630539 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
CLPTM1L-216ENST00000630539 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
CLPTM1L-216ENST00000630539 FAM9AQ8IZU1 332 aaPredicted RBP27.24■■□□□ 1.95
CLPTM1L-216ENST00000630539 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
CLPTM1L-216ENST00000630539 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
CLPTM1L-216ENST00000630539 IFT140Q96RY7 1462 aa27.2■■□□□ 1.94
CLPTM1L-216ENST00000630539 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
CLPTM1L-216ENST00000630539 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.93
CLPTM1L-216ENST00000630539 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
CLPTM1L-216ENST00000630539 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.932e-6■■■■■ 27.5
CLPTM1L-216ENST00000630539 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
CLPTM1L-216ENST00000630539 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
CLPTM1L-216ENST00000630539 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
CLPTM1L-216ENST00000630539 EEA1Q15075 1411 aa27.02■■□□□ 1.92
CLPTM1L-216ENST00000630539 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
CLPTM1L-216ENST00000630539 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
CLPTM1L-216ENST00000630539 IGF1RP08069 1367 aa26.94■■□□□ 1.9
CLPTM1L-216ENST00000630539 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
CLPTM1L-216ENST00000630539 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
CLPTM1L-216ENST00000630539 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
CLPTM1L-216ENST00000630539 LOC105371045A0A1W2PR82 267 aa26.82■■□□□ 1.88
CLPTM1L-216ENST00000630539 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
CLPTM1L-216ENST00000630539 PRXQ9BXM0 1461 aa26.8■■□□□ 1.88
CLPTM1L-216ENST00000630539 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
CLPTM1L-216ENST00000630539 CUL7Q14999 1698 aa26.79■■□□□ 1.88
CLPTM1L-216ENST00000630539 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
CLPTM1L-216ENST00000630539 KIF21BO75037 1637 aa26.76■■□□□ 1.87
CLPTM1L-216ENST00000630539 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
CLPTM1L-216ENST00000630539 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
CLPTM1L-216ENST00000630539 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
CLPTM1L-216ENST00000630539 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
CLPTM1L-216ENST00000630539 FBLN2P98095 1184 aa26.64■■□□□ 1.86
CLPTM1L-216ENST00000630539 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
CLPTM1L-216ENST00000630539 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
CLPTM1L-216ENST00000630539 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
CLPTM1L-216ENST00000630539 GRIN2AQ12879 1464 aa26.58■■□□□ 1.84
CLPTM1L-216ENST00000630539 CHD1O14646 1710 aa26.56■■□□□ 1.84
CLPTM1L-216ENST00000630539 TNIKQ9UKE5 1360 aa26.45■■□□□ 1.83
CLPTM1L-216ENST00000630539 CEP170Q5SW79 1584 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms