RNA–Protein interactions for RNA: ENST00000305586.11

FXR1-201, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5 BASIC

Gene FXR1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-201ENST00000305586 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
FXR1-201ENST00000305586 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
FXR1-201ENST00000305586 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
FXR1-201ENST00000305586 SHROOM4Q9ULL8 1493 aa20.41■□□□□ 0.86
FXR1-201ENST00000305586 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
FXR1-201ENST00000305586 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
FXR1-201ENST00000305586 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
FXR1-201ENST00000305586 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
FXR1-201ENST00000305586 ABCC9O60706 1549 aa19.6■□□□□ 0.73
FXR1-201ENST00000305586 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
FXR1-201ENST00000305586 NACADO15069 1562 aa19.43■□□□□ 0.7
FXR1-201ENST00000305586 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
FXR1-201ENST00000305586 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
FXR1-201ENST00000305586 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
FXR1-201ENST00000305586 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
FXR1-201ENST00000305586 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
FXR1-201ENST00000305586 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
FXR1-201ENST00000305586 WIZO95785 1651 aa18.79■□□□□ 0.6
FXR1-201ENST00000305586 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
FXR1-201ENST00000305586 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
FXR1-201ENST00000305586 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
FXR1-201ENST00000305586 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
FXR1-201ENST00000305586 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
FXR1-201ENST00000305586 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
FXR1-201ENST00000305586 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
FXR1-201ENST00000305586 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
FXR1-201ENST00000305586 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
FXR1-201ENST00000305586 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
FXR1-201ENST00000305586 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
FXR1-201ENST00000305586 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.53
FXR1-201ENST00000305586 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
FXR1-201ENST00000305586 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
FXR1-201ENST00000305586 PCGF6Q9BYE7 350 aa18.18■□□□□ 0.5
FXR1-201ENST00000305586 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
FXR1-201ENST00000305586 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
FXR1-201ENST00000305586 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
FXR1-201ENST00000305586 SOGA1O94964 1423 aa17.97■□□□□ 0.47
FXR1-201ENST00000305586 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
FXR1-201ENST00000305586 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
FXR1-201ENST00000305586 HRCP23327 699 aa17.96■□□□□ 0.47
FXR1-201ENST00000305586 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
FXR1-201ENST00000305586 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
FXR1-201ENST00000305586 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
FXR1-201ENST00000305586 EEA1Q15075 1411 aa17.89■□□□□ 0.45
FXR1-201ENST00000305586 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
FXR1-201ENST00000305586 TNIKQ9UKE5 1360 aa17.76■□□□□ 0.43
FXR1-201ENST00000305586 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
FXR1-201ENST00000305586 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
FXR1-201ENST00000305586 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
FXR1-201ENST00000305586 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
FXR1-201ENST00000305586 CFTRP13569 1480 aa17.71■□□□□ 0.43
FXR1-201ENST00000305586 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.42
FXR1-201ENST00000305586 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
FXR1-201ENST00000305586 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
FXR1-201ENST00000305586 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
FXR1-201ENST00000305586 KIF21BO75037 1637 aa17.66■□□□□ 0.42
FXR1-201ENST00000305586 CUX1P39880 1505 aa17.64■□□□□ 0.41
FXR1-201ENST00000305586 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
FXR1-201ENST00000305586 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
FXR1-201ENST00000305586 RAPGEF2Q9Y4G8 1499 aa17.57■□□□□ 0.4
FXR1-201ENST00000305586 CLIP1P30622 1438 aa17.49■□□□□ 0.39
FXR1-201ENST00000305586 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
FXR1-201ENST00000305586 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
FXR1-201ENST00000305586 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
FXR1-201ENST00000305586 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
FXR1-201ENST00000305586 ZEB1P37275 1124 aaPredicted RBP17.43■□□□□ 0.38
FXR1-201ENST00000305586 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
FXR1-201ENST00000305586 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
FXR1-201ENST00000305586 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
FXR1-201ENST00000305586 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
FXR1-201ENST00000305586 CUX2O14529 1486 aa17.36■□□□□ 0.37
FXR1-201ENST00000305586 NESP48681 1621 aa17.36■□□□□ 0.37
FXR1-201ENST00000305586 IGF1RP08069 1367 aa17.3■□□□□ 0.36
FXR1-201ENST00000305586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
FXR1-201ENST00000305586 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
FXR1-201ENST00000305586 APLP2Q06481 763 aa17.27■□□□□ 0.35
FXR1-201ENST00000305586 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
FXR1-201ENST00000305586 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
FXR1-201ENST00000305586 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
FXR1-201ENST00000305586 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
FXR1-201ENST00000305586 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
FXR1-201ENST00000305586 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
FXR1-201ENST00000305586 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
FXR1-201ENST00000305586 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
FXR1-201ENST00000305586 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
FXR1-201ENST00000305586 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
FXR1-201ENST00000305586 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
FXR1-201ENST00000305586 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
FXR1-201ENST00000305586 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
FXR1-201ENST00000305586 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
FXR1-201ENST00000305586 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.33
FXR1-201ENST00000305586 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
FXR1-201ENST00000305586 CUL7Q14999 1698 aa17.05■□□□□ 0.32
FXR1-201ENST00000305586 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
FXR1-201ENST00000305586 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
FXR1-201ENST00000305586 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
FXR1-201ENST00000305586 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
FXR1-201ENST00000305586 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
FXR1-201ENST00000305586 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
FXR1-201ENST00000305586 TIAM1Q13009 1591 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms