RNA–Protein interactions for RNA: ENST00000524384.5

PTP4A2-208, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-208ENST00000524384 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
PTP4A2-208ENST00000524384 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
PTP4A2-208ENST00000524384 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
PTP4A2-208ENST00000524384 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
PTP4A2-208ENST00000524384 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
PTP4A2-208ENST00000524384 FOXD1Q16676 465 aa21.21■□□□□ 0.99
PTP4A2-208ENST00000524384 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
PTP4A2-208ENST00000524384 ABCC9O60706 1549 aa20.01■□□□□ 0.79
PTP4A2-208ENST00000524384 MSH5O43196 834 aa19.92■□□□□ 0.78
PTP4A2-208ENST00000524384 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
PTP4A2-208ENST00000524384 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
PTP4A2-208ENST00000524384 ADRA2BP18089 450 aa19.75■□□□□ 0.75
PTP4A2-208ENST00000524384 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
PTP4A2-208ENST00000524384 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
PTP4A2-208ENST00000524384 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
PTP4A2-208ENST00000524384 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
PTP4A2-208ENST00000524384 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTP4A2-208ENST00000524384 NACADO15069 1562 aa18.47■□□□□ 0.55
PTP4A2-208ENST00000524384 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
PTP4A2-208ENST00000524384 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
PTP4A2-208ENST00000524384 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
PTP4A2-208ENST00000524384 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
PTP4A2-208ENST00000524384 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
PTP4A2-208ENST00000524384 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
PTP4A2-208ENST00000524384 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
PTP4A2-208ENST00000524384 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
PTP4A2-208ENST00000524384 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
PTP4A2-208ENST00000524384 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
PTP4A2-208ENST00000524384 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
PTP4A2-208ENST00000524384 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
PTP4A2-208ENST00000524384 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
PTP4A2-208ENST00000524384 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
PTP4A2-208ENST00000524384 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
PTP4A2-208ENST00000524384 CUX2O14529 1486 aa17.51■□□□□ 0.39
PTP4A2-208ENST00000524384 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
PTP4A2-208ENST00000524384 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
PTP4A2-208ENST00000524384 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
PTP4A2-208ENST00000524384 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
PTP4A2-208ENST00000524384 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
PTP4A2-208ENST00000524384 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
PTP4A2-208ENST00000524384 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
PTP4A2-208ENST00000524384 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
PTP4A2-208ENST00000524384 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
PTP4A2-208ENST00000524384 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
PTP4A2-208ENST00000524384 NESP48681 1621 aa17■□□□□ 0.31
PTP4A2-208ENST00000524384 THOC2Q8NI27 1593 aaKnown RBP16.97■□□□□ 0.31
PTP4A2-208ENST00000524384 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
PTP4A2-208ENST00000524384 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
PTP4A2-208ENST00000524384 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
PTP4A2-208ENST00000524384 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
PTP4A2-208ENST00000524384 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
PTP4A2-208ENST00000524384 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
PTP4A2-208ENST00000524384 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
PTP4A2-208ENST00000524384 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
PTP4A2-208ENST00000524384 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
PTP4A2-208ENST00000524384 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
PTP4A2-208ENST00000524384 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
PTP4A2-208ENST00000524384 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PTP4A2-208ENST00000524384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTP4A2-208ENST00000524384 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
PTP4A2-208ENST00000524384 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
PTP4A2-208ENST00000524384 WDR62O43379 1518 aa16.59■□□□□ 0.25
PTP4A2-208ENST00000524384 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
PTP4A2-208ENST00000524384 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
PTP4A2-208ENST00000524384 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
PTP4A2-208ENST00000524384 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
PTP4A2-208ENST00000524384 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
PTP4A2-208ENST00000524384 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
PTP4A2-208ENST00000524384 KCNA4P22459 653 aa16.38■□□□□ 0.21
PTP4A2-208ENST00000524384 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
PTP4A2-208ENST00000524384 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
PTP4A2-208ENST00000524384 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
PTP4A2-208ENST00000524384 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
PTP4A2-208ENST00000524384 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
PTP4A2-208ENST00000524384 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
PTP4A2-208ENST00000524384 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
PTP4A2-208ENST00000524384 CFTRP13569 1480 aa16.18■□□□□ 0.18
PTP4A2-208ENST00000524384 WIZO95785 1651 aa16.14■□□□□ 0.18
PTP4A2-208ENST00000524384 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
PTP4A2-208ENST00000524384 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
PTP4A2-208ENST00000524384 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
PTP4A2-208ENST00000524384 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
PTP4A2-208ENST00000524384 CAPN15O75808 1086 aa16.03■□□□□ 0.16
PTP4A2-208ENST00000524384 CHD1O14646 1710 aa16.02■□□□□ 0.16
PTP4A2-208ENST00000524384 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
PTP4A2-208ENST00000524384 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
PTP4A2-208ENST00000524384 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
PTP4A2-208ENST00000524384 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
PTP4A2-208ENST00000524384 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
PTP4A2-208ENST00000524384 FBLN2P98095 1184 aa15.92■□□□□ 0.14
PTP4A2-208ENST00000524384 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTP4A2-208ENST00000524384 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
PTP4A2-208ENST00000524384 DSG3P32926 999 aa15.87■□□□□ 0.13
PTP4A2-208ENST00000524384 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
PTP4A2-208ENST00000524384 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
PTP4A2-208ENST00000524384 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
PTP4A2-208ENST00000524384 APLP2Q06481 763 aa15.82■□□□□ 0.12
PTP4A2-208ENST00000524384 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
PTP4A2-208ENST00000524384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
PTP4A2-208ENST00000524384 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms