RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 NISCHQ9Y2I1 1504 aa29.63■■■□□ 2.33
FXR1-209ENST00000472339 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
FXR1-209ENST00000472339 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
FXR1-209ENST00000472339 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
FXR1-209ENST00000472339 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
FXR1-209ENST00000472339 HRCP23327 699 aa24.82■■□□□ 1.56
FXR1-209ENST00000472339 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
FXR1-209ENST00000472339 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
FXR1-209ENST00000472339 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
FXR1-209ENST00000472339 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
FXR1-209ENST00000472339 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
FXR1-209ENST00000472339 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
FXR1-209ENST00000472339 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
FXR1-209ENST00000472339 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
FXR1-209ENST00000472339 ABCC9O60706 1549 aa23.84■■□□□ 1.41
FXR1-209ENST00000472339 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
FXR1-209ENST00000472339 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
FXR1-209ENST00000472339 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
FXR1-209ENST00000472339 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
FXR1-209ENST00000472339 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
FXR1-209ENST00000472339 PELP1Q8IZL8 1130 aaKnown RBP23.33■■□□□ 1.33
FXR1-209ENST00000472339 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
FXR1-209ENST00000472339 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
FXR1-209ENST00000472339 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
FXR1-209ENST00000472339 NACADO15069 1562 aa23.03■■□□□ 1.28
FXR1-209ENST00000472339 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
FXR1-209ENST00000472339 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
FXR1-209ENST00000472339 WIZO95785 1651 aa22.94■■□□□ 1.26
FXR1-209ENST00000472339 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
FXR1-209ENST00000472339 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
FXR1-209ENST00000472339 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
FXR1-209ENST00000472339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
FXR1-209ENST00000472339 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
FXR1-209ENST00000472339 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
FXR1-209ENST00000472339 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
FXR1-209ENST00000472339 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.22
FXR1-209ENST00000472339 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
FXR1-209ENST00000472339 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
FXR1-209ENST00000472339 CEP162Q5TB80 1403 aa22.58■■□□□ 1.21
FXR1-209ENST00000472339 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
FXR1-209ENST00000472339 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
FXR1-209ENST00000472339 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
FXR1-209ENST00000472339 EEA1Q15075 1411 aa22.5■■□□□ 1.19
FXR1-209ENST00000472339 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
FXR1-209ENST00000472339 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
FXR1-209ENST00000472339 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
FXR1-209ENST00000472339 SOGA1O94964 1423 aa22.43■■□□□ 1.18
FXR1-209ENST00000472339 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
FXR1-209ENST00000472339 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
FXR1-209ENST00000472339 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
FXR1-209ENST00000472339 MYT1Q01538 1121 aa22.34■■□□□ 1.17
FXR1-209ENST00000472339 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
FXR1-209ENST00000472339 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
FXR1-209ENST00000472339 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
FXR1-209ENST00000472339 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
FXR1-209ENST00000472339 KIF21BO75037 1637 aa22.17■■□□□ 1.14
FXR1-209ENST00000472339 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
FXR1-209ENST00000472339 CLIP1P30622 1438 aa22.07■■□□□ 1.12
FXR1-209ENST00000472339 MIER1Q8N108 512 aa22.07■■□□□ 1.12
FXR1-209ENST00000472339 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
FXR1-209ENST00000472339 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
FXR1-209ENST00000472339 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
FXR1-209ENST00000472339 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
FXR1-209ENST00000472339 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
FXR1-209ENST00000472339 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
FXR1-209ENST00000472339 APLP2Q06481 763 aa21.94■■□□□ 1.1
FXR1-209ENST00000472339 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
FXR1-209ENST00000472339 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
FXR1-209ENST00000472339 RAPGEF2Q9Y4G8 1499 aa21.89■■□□□ 1.09
FXR1-209ENST00000472339 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
FXR1-209ENST00000472339 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
FXR1-209ENST00000472339 DHX57Q6P158 1386 aaKnown RBP21.76■■□□□ 1.07
FXR1-209ENST00000472339 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
FXR1-209ENST00000472339 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
FXR1-209ENST00000472339 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
FXR1-209ENST00000472339 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
FXR1-209ENST00000472339 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
FXR1-209ENST00000472339 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
FXR1-209ENST00000472339 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
FXR1-209ENST00000472339 CUX2O14529 1486 aa21.61■■□□□ 1.05
FXR1-209ENST00000472339 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
FXR1-209ENST00000472339 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
FXR1-209ENST00000472339 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
FXR1-209ENST00000472339 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
FXR1-209ENST00000472339 CUX1P39880 1505 aa21.42■■□□□ 1.02
FXR1-209ENST00000472339 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
FXR1-209ENST00000472339 TSHZ2Q9NRE2 1034 aa21.35■■□□□ 1.01
FXR1-209ENST00000472339 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
FXR1-209ENST00000472339 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
FXR1-209ENST00000472339 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
FXR1-209ENST00000472339 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
FXR1-209ENST00000472339 NCAPD3P42695 1498 aa21.29■■□□□ 1
FXR1-209ENST00000472339 TIAM1Q13009 1591 aa21.28■■□□□ 1
FXR1-209ENST00000472339 ITGAEP38570 1179 aa21.25■□□□□ 0.99
FXR1-209ENST00000472339 SETD5Q9C0A6 1442 aa21.25■□□□□ 0.99
FXR1-209ENST00000472339 CFTRP13569 1480 aa21.24■□□□□ 0.99
FXR1-209ENST00000472339 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
FXR1-209ENST00000472339 ANP32EQ9BTT0 268 aa21.2■□□□□ 0.98
FXR1-209ENST00000472339 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
FXR1-209ENST00000472339 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms