RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
FXR1-202ENST00000357559 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
FXR1-202ENST00000357559 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
FXR1-202ENST00000357559 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.31
FXR1-202ENST00000357559 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
FXR1-202ENST00000357559 ERICH6Q7L0X2 663 aa16.7■□□□□ 0.26
FXR1-202ENST00000357559 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
FXR1-202ENST00000357559 APLP2Q06481 763 aa16.51■□□□□ 0.23
FXR1-202ENST00000357559 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
FXR1-202ENST00000357559 MYT1Q01538 1121 aa16.4■□□□□ 0.22
FXR1-202ENST00000357559 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
FXR1-202ENST00000357559 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
FXR1-202ENST00000357559 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
FXR1-202ENST00000357559 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
FXR1-202ENST00000357559 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
FXR1-202ENST00000357559 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
FXR1-202ENST00000357559 NEFLP07196 543 aa15.96■□□□□ 0.15
FXR1-202ENST00000357559 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
FXR1-202ENST00000357559 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.13
FXR1-202ENST00000357559 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
FXR1-202ENST00000357559 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
FXR1-202ENST00000357559 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
FXR1-202ENST00000357559 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
FXR1-202ENST00000357559 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
FXR1-202ENST00000357559 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
FXR1-202ENST00000357559 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
FXR1-202ENST00000357559 ITGAEP38570 1179 aa15.53■□□□□ 0.08
FXR1-202ENST00000357559 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
FXR1-202ENST00000357559 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
FXR1-202ENST00000357559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
FXR1-202ENST00000357559 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
FXR1-202ENST00000357559 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
FXR1-202ENST00000357559 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
FXR1-202ENST00000357559 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
FXR1-202ENST00000357559 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
FXR1-202ENST00000357559 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
FXR1-202ENST00000357559 BCANQ96GW7 911 aa15.11■□□□□ 0.01
FXR1-202ENST00000357559 HRCP23327 699 aa15.01□□□□□ -0.01
FXR1-202ENST00000357559 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
FXR1-202ENST00000357559 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
FXR1-202ENST00000357559 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
FXR1-202ENST00000357559 NEUROD1Q13562 356 aa14.91□□□□□ -0.02
FXR1-202ENST00000357559 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
FXR1-202ENST00000357559 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
FXR1-202ENST00000357559 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
FXR1-202ENST00000357559 LOC105371045A0A1W2PR82 267 aa14.84□□□□□ -0.03
FXR1-202ENST00000357559 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
FXR1-202ENST00000357559 EIF5BO60841 1220 aaKnown RBP14.82□□□□□ -0.04
FXR1-202ENST00000357559 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
FXR1-202ENST00000357559 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
FXR1-202ENST00000357559 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
FXR1-202ENST00000357559 ARXQ96QS3 562 aa14.71□□□□□ -0.06
FXR1-202ENST00000357559 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
FXR1-202ENST00000357559 NEFMP07197 916 aa14.65□□□□□ -0.06
FXR1-202ENST00000357559 ANP32CO43423 234 aa14.64□□□□□ -0.07
FXR1-202ENST00000357559 HSP90AA1P07900 732 aaKnown RBP14.64□□□□□ -0.07
FXR1-202ENST00000357559 ARID3CA6NKF2 412 aa14.6□□□□□ -0.07
FXR1-202ENST00000357559 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
FXR1-202ENST00000357559 FBLN2P98095 1184 aa14.6□□□□□ -0.07
FXR1-202ENST00000357559 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
FXR1-202ENST00000357559 A0A0G2JS52 829 aa14.55□□□□□ -0.08
FXR1-202ENST00000357559 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
FXR1-202ENST00000357559 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
FXR1-202ENST00000357559 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
FXR1-202ENST00000357559 NBR1Q14596 966 aa14.49□□□□□ -0.09
FXR1-202ENST00000357559 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
FXR1-202ENST00000357559 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
FXR1-202ENST00000357559 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
FXR1-202ENST00000357559 CHGAP10645 457 aaKnown RBP14.41□□□□□ -0.1
FXR1-202ENST00000357559 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.1
FXR1-202ENST00000357559 TPRNQ4KMQ1 711 aa14.38□□□□□ -0.11
FXR1-202ENST00000357559 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
FXR1-202ENST00000357559 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
FXR1-202ENST00000357559 GLIPR1L2Q4G1C9 344 aa14.36□□□□□ -0.11
FXR1-202ENST00000357559 ZBTB7CA1YPR0 619 aa14.36□□□□□ -0.11
FXR1-202ENST00000357559 UPF2Q9HAU5 1272 aaKnown RBP14.35□□□□□ -0.11
FXR1-202ENST00000357559 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
FXR1-202ENST00000357559 FKBP8Q14318 412 aa14.33□□□□□ -0.12
FXR1-202ENST00000357559 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
FXR1-202ENST00000357559 FAM9BQ8IZU0 186 aa14.29□□□□□ -0.12
FXR1-202ENST00000357559 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
FXR1-202ENST00000357559 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.14
FXR1-202ENST00000357559 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
FXR1-202ENST00000357559 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
FXR1-202ENST00000357559 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
FXR1-202ENST00000357559 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
FXR1-202ENST00000357559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.144e-6■□□□□ 10.9
FXR1-202ENST00000357559 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
FXR1-202ENST00000357559 NCLP19338 710 aaKnown RBP14.13□□□□□ -0.15
FXR1-202ENST00000357559 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
FXR1-202ENST00000357559 ACIN1Q9UKV3 1341 aaKnown RBP14.11□□□□□ -0.15
FXR1-202ENST00000357559 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.1□□□□□ -0.15
FXR1-202ENST00000357559 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
FXR1-202ENST00000357559 WDR43Q15061 677 aaKnown RBP eCLIP14.08□□□□□ -0.16
FXR1-202ENST00000357559 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.16
FXR1-202ENST00000357559 DDX10Q13206 875 aaKnown RBP14.07□□□□□ -0.16
FXR1-202ENST00000357559 DNTTIP2Q5QJE6 756 aaKnown RBP14.07□□□□□ -0.16
FXR1-202ENST00000357559 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
FXR1-202ENST00000357559 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
FXR1-202ENST00000357559 PTMAP06454 111 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms