RNA–Protein interactions for RNA: ENST00000484790.5

FXR1-218, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-218ENST00000484790 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
FXR1-218ENST00000484790 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
FXR1-218ENST00000484790 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
FXR1-218ENST00000484790 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
FXR1-218ENST00000484790 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
FXR1-218ENST00000484790 FOXD1Q16676 465 aa21.82■■□□□ 1.08
FXR1-218ENST00000484790 ADRA2BP18089 450 aa21.49■■□□□ 1.03
FXR1-218ENST00000484790 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
FXR1-218ENST00000484790 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
FXR1-218ENST00000484790 KCNA4P22459 653 aa20.41■□□□□ 0.86
FXR1-218ENST00000484790 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
FXR1-218ENST00000484790 MSH5O43196 834 aa19.82■□□□□ 0.76
FXR1-218ENST00000484790 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
FXR1-218ENST00000484790 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
FXR1-218ENST00000484790 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
FXR1-218ENST00000484790 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
FXR1-218ENST00000484790 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
FXR1-218ENST00000484790 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
FXR1-218ENST00000484790 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
FXR1-218ENST00000484790 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
FXR1-218ENST00000484790 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
FXR1-218ENST00000484790 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
FXR1-218ENST00000484790 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
FXR1-218ENST00000484790 ZBTB22O15209 634 aa18.8■□□□□ 0.6
FXR1-218ENST00000484790 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
FXR1-218ENST00000484790 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
FXR1-218ENST00000484790 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
FXR1-218ENST00000484790 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
FXR1-218ENST00000484790 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
FXR1-218ENST00000484790 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
FXR1-218ENST00000484790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.457e-6■□□□□ 10.8
FXR1-218ENST00000484790 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
FXR1-218ENST00000484790 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
FXR1-218ENST00000484790 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
FXR1-218ENST00000484790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
FXR1-218ENST00000484790 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
FXR1-218ENST00000484790 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
FXR1-218ENST00000484790 FKBP8Q14318 412 aa17.28■□□□□ 0.36
FXR1-218ENST00000484790 APLP2Q06481 763 aa17.2■□□□□ 0.34
FXR1-218ENST00000484790 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
FXR1-218ENST00000484790 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
FXR1-218ENST00000484790 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
FXR1-218ENST00000484790 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
FXR1-218ENST00000484790 CAPN15O75808 1086 aa16.9■□□□□ 0.3
FXR1-218ENST00000484790 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
FXR1-218ENST00000484790 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
FXR1-218ENST00000484790 POLA2Q14181 598 aa16.81■□□□□ 0.28
FXR1-218ENST00000484790 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
FXR1-218ENST00000484790 FBLN2P98095 1184 aa16.71■□□□□ 0.27
FXR1-218ENST00000484790 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
FXR1-218ENST00000484790 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
FXR1-218ENST00000484790 ABCB7O75027 752 aa16.67■□□□□ 0.26
FXR1-218ENST00000484790 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
FXR1-218ENST00000484790 DSG3P32926 999 aa16.46■□□□□ 0.23
FXR1-218ENST00000484790 PROM2Q8N271 834 aa16.45■□□□□ 0.22
FXR1-218ENST00000484790 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
FXR1-218ENST00000484790 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
FXR1-218ENST00000484790 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
FXR1-218ENST00000484790 VASPP50552 380 aaPredicted RBP16.23■□□□□ 0.19
FXR1-218ENST00000484790 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
FXR1-218ENST00000484790 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
FXR1-218ENST00000484790 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
FXR1-218ENST00000484790 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
FXR1-218ENST00000484790 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
FXR1-218ENST00000484790 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
FXR1-218ENST00000484790 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
FXR1-218ENST00000484790 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
FXR1-218ENST00000484790 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
FXR1-218ENST00000484790 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
FXR1-218ENST00000484790 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
FXR1-218ENST00000484790 SPOCK2Q92563 424 aa15.77■□□□□ 0.12
FXR1-218ENST00000484790 PKD2Q13563 968 aa15.76■□□□□ 0.11
FXR1-218ENST00000484790 MIER1Q8N108 512 aa15.76■□□□□ 0.11
FXR1-218ENST00000484790 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
FXR1-218ENST00000484790 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
FXR1-218ENST00000484790 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
FXR1-218ENST00000484790 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
FXR1-218ENST00000484790 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
FXR1-218ENST00000484790 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
FXR1-218ENST00000484790 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
FXR1-218ENST00000484790 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
FXR1-218ENST00000484790 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
FXR1-218ENST00000484790 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.07
FXR1-218ENST00000484790 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
FXR1-218ENST00000484790 RGL2O15211 777 aa15.41■□□□□ 0.06
FXR1-218ENST00000484790 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
FXR1-218ENST00000484790 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
FXR1-218ENST00000484790 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
FXR1-218ENST00000484790 NUBP1P53384 320 aa15.3■□□□□ 0.04
FXR1-218ENST00000484790 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
FXR1-218ENST00000484790 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
FXR1-218ENST00000484790 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
FXR1-218ENST00000484790 GSE1Q14687 1217 aa15.24■□□□□ 0.03
FXR1-218ENST00000484790 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
FXR1-218ENST00000484790 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
FXR1-218ENST00000484790 DCAF8Q5TAQ9 597 aa15.22■□□□□ 0.03
FXR1-218ENST00000484790 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
FXR1-218ENST00000484790 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
FXR1-218ENST00000484790 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
FXR1-218ENST00000484790 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms