RNA–Protein interactions for RNA: ENST00000468861.5

FXR1-207, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-207ENST00000468861 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
FXR1-207ENST00000468861 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
FXR1-207ENST00000468861 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
FXR1-207ENST00000468861 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
FXR1-207ENST00000468861 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
FXR1-207ENST00000468861 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
FXR1-207ENST00000468861 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
FXR1-207ENST00000468861 ADRA2BP18089 450 aa18.95■□□□□ 0.62
FXR1-207ENST00000468861 FOXD1Q16676 465 aa18.81■□□□□ 0.6
FXR1-207ENST00000468861 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
FXR1-207ENST00000468861 HRCP23327 699 aa18.79■□□□□ 0.6
FXR1-207ENST00000468861 MYT1Q01538 1121 aa18.58■□□□□ 0.56
FXR1-207ENST00000468861 KCNA4P22459 653 aa18.51■□□□□ 0.55
FXR1-207ENST00000468861 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
FXR1-207ENST00000468861 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
FXR1-207ENST00000468861 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
FXR1-207ENST00000468861 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
FXR1-207ENST00000468861 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
FXR1-207ENST00000468861 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
FXR1-207ENST00000468861 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
FXR1-207ENST00000468861 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
FXR1-207ENST00000468861 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
FXR1-207ENST00000468861 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
FXR1-207ENST00000468861 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
FXR1-207ENST00000468861 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
FXR1-207ENST00000468861 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
FXR1-207ENST00000468861 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
FXR1-207ENST00000468861 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
FXR1-207ENST00000468861 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
FXR1-207ENST00000468861 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
FXR1-207ENST00000468861 ACIN1Q9UKV3 1341 aaKnown RBP17.42■□□□□ 0.38
FXR1-207ENST00000468861 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
FXR1-207ENST00000468861 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
FXR1-207ENST00000468861 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
FXR1-207ENST00000468861 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
FXR1-207ENST00000468861 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
FXR1-207ENST00000468861 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
FXR1-207ENST00000468861 ZBTB22O15209 634 aa17.06■□□□□ 0.32
FXR1-207ENST00000468861 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
FXR1-207ENST00000468861 MSH5O43196 834 aa16.95■□□□□ 0.3
FXR1-207ENST00000468861 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
FXR1-207ENST00000468861 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
FXR1-207ENST00000468861 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
FXR1-207ENST00000468861 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
FXR1-207ENST00000468861 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
FXR1-207ENST00000468861 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
FXR1-207ENST00000468861 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
FXR1-207ENST00000468861 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
FXR1-207ENST00000468861 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
FXR1-207ENST00000468861 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
FXR1-207ENST00000468861 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
FXR1-207ENST00000468861 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
FXR1-207ENST00000468861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
FXR1-207ENST00000468861 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
FXR1-207ENST00000468861 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
FXR1-207ENST00000468861 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
FXR1-207ENST00000468861 ABCC9O60706 1549 aa16.38■□□□□ 0.21
FXR1-207ENST00000468861 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
FXR1-207ENST00000468861 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
FXR1-207ENST00000468861 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
FXR1-207ENST00000468861 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.21
FXR1-207ENST00000468861 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
FXR1-207ENST00000468861 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
FXR1-207ENST00000468861 MIER1Q8N108 512 aa16.28■□□□□ 0.2
FXR1-207ENST00000468861 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
FXR1-207ENST00000468861 APLP2Q06481 763 aa16.15■□□□□ 0.18
FXR1-207ENST00000468861 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
FXR1-207ENST00000468861 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
FXR1-207ENST00000468861 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
FXR1-207ENST00000468861 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
FXR1-207ENST00000468861 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
FXR1-207ENST00000468861 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
FXR1-207ENST00000468861 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
FXR1-207ENST00000468861 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
FXR1-207ENST00000468861 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
FXR1-207ENST00000468861 FKBP8Q14318 412 aa15.89■□□□□ 0.13
FXR1-207ENST00000468861 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
FXR1-207ENST00000468861 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
FXR1-207ENST00000468861 ERICH6BQ5W0A0 696 aa15.84■□□□□ 0.13
FXR1-207ENST00000468861 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
FXR1-207ENST00000468861 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
FXR1-207ENST00000468861 NEFLP07196 543 aa15.77■□□□□ 0.12
FXR1-207ENST00000468861 EEA1Q15075 1411 aa15.77■□□□□ 0.11
FXR1-207ENST00000468861 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
FXR1-207ENST00000468861 BCANQ96GW7 911 aa15.66■□□□□ 0.1
FXR1-207ENST00000468861 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
FXR1-207ENST00000468861 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
FXR1-207ENST00000468861 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
FXR1-207ENST00000468861 DHX57Q6P158 1386 aaKnown RBP15.61■□□□□ 0.09
FXR1-207ENST00000468861 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
FXR1-207ENST00000468861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.094e-6■□□□□ 10.9
FXR1-207ENST00000468861 UBE2Q2Q8WVN8 375 aa15.6■□□□□ 0.09
FXR1-207ENST00000468861 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
FXR1-207ENST00000468861 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.09
FXR1-207ENST00000468861 SCRIBQ14160 1630 aa15.58■□□□□ 0.08
FXR1-207ENST00000468861 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
FXR1-207ENST00000468861 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
FXR1-207ENST00000468861 CCER2I3L3R5 266 aa15.51■□□□□ 0.07
FXR1-207ENST00000468861 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
FXR1-207ENST00000468861 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms