RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
FXR1-211ENST00000475315 HRCP23327 699 aa20.13■□□□□ 0.81
FXR1-211ENST00000475315 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
FXR1-211ENST00000475315 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
FXR1-211ENST00000475315 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
FXR1-211ENST00000475315 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
FXR1-211ENST00000475315 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
FXR1-211ENST00000475315 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
FXR1-211ENST00000475315 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
FXR1-211ENST00000475315 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
FXR1-211ENST00000475315 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
FXR1-211ENST00000475315 MYT1Q01538 1121 aa19.1■□□□□ 0.65
FXR1-211ENST00000475315 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
FXR1-211ENST00000475315 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
FXR1-211ENST00000475315 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
FXR1-211ENST00000475315 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
FXR1-211ENST00000475315 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
FXR1-211ENST00000475315 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
FXR1-211ENST00000475315 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
FXR1-211ENST00000475315 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
FXR1-211ENST00000475315 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.51
FXR1-211ENST00000475315 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
FXR1-211ENST00000475315 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
FXR1-211ENST00000475315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
FXR1-211ENST00000475315 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
FXR1-211ENST00000475315 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
FXR1-211ENST00000475315 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
FXR1-211ENST00000475315 ABCC9O60706 1549 aa17.77■□□□□ 0.43
FXR1-211ENST00000475315 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
FXR1-211ENST00000475315 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
FXR1-211ENST00000475315 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
FXR1-211ENST00000475315 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
FXR1-211ENST00000475315 ANP32EQ9BTT0 268 aa17.67■□□□□ 0.42
FXR1-211ENST00000475315 MIER1Q8N108 512 aa17.64■□□□□ 0.41
FXR1-211ENST00000475315 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
FXR1-211ENST00000475315 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
FXR1-211ENST00000475315 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
FXR1-211ENST00000475315 CLSPNQ9HAW4 1339 aa17.56■□□□□ 0.4
FXR1-211ENST00000475315 TSHZ2Q9NRE2 1034 aa17.53■□□□□ 0.4
FXR1-211ENST00000475315 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.39
FXR1-211ENST00000475315 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
FXR1-211ENST00000475315 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
FXR1-211ENST00000475315 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
FXR1-211ENST00000475315 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
FXR1-211ENST00000475315 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
FXR1-211ENST00000475315 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
FXR1-211ENST00000475315 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
FXR1-211ENST00000475315 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
FXR1-211ENST00000475315 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
FXR1-211ENST00000475315 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
FXR1-211ENST00000475315 WIZO95785 1651 aa17.01■□□□□ 0.31
FXR1-211ENST00000475315 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
FXR1-211ENST00000475315 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
FXR1-211ENST00000475315 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
FXR1-211ENST00000475315 MSH5O43196 834 aa16.97■□□□□ 0.31
FXR1-211ENST00000475315 BCANQ96GW7 911 aa16.96■□□□□ 0.3
FXR1-211ENST00000475315 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
FXR1-211ENST00000475315 SOGA1O94964 1423 aa16.93■□□□□ 0.3
FXR1-211ENST00000475315 FKBP8Q14318 412 aa16.92■□□□□ 0.3
FXR1-211ENST00000475315 EEA1Q15075 1411 aa16.91■□□□□ 0.3
FXR1-211ENST00000475315 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
FXR1-211ENST00000475315 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
FXR1-211ENST00000475315 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
FXR1-211ENST00000475315 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
FXR1-211ENST00000475315 NACADO15069 1562 aa16.85■□□□□ 0.29
FXR1-211ENST00000475315 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
FXR1-211ENST00000475315 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
FXR1-211ENST00000475315 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
FXR1-211ENST00000475315 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
FXR1-211ENST00000475315 MYT1LQ9UL68 1186 aa16.77■□□□□ 0.28
FXR1-211ENST00000475315 CLIP1P30622 1438 aa16.76■□□□□ 0.27
FXR1-211ENST00000475315 NEFLP07196 543 aa16.74■□□□□ 0.27
FXR1-211ENST00000475315 ITGAEP38570 1179 aa16.74■□□□□ 0.27
FXR1-211ENST00000475315 KIF21BO75037 1637 aa16.72■□□□□ 0.27
FXR1-211ENST00000475315 APLP2Q06481 763 aa16.72■□□□□ 0.27
FXR1-211ENST00000475315 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
FXR1-211ENST00000475315 DEKP35659 375 aaKnown RBP16.68■□□□□ 0.26
FXR1-211ENST00000475315 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
FXR1-211ENST00000475315 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
FXR1-211ENST00000475315 CUX2O14529 1486 aa16.65■□□□□ 0.26
FXR1-211ENST00000475315 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
FXR1-211ENST00000475315 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
FXR1-211ENST00000475315 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
FXR1-211ENST00000475315 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
FXR1-211ENST00000475315 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
FXR1-211ENST00000475315 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
FXR1-211ENST00000475315 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
FXR1-211ENST00000475315 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
FXR1-211ENST00000475315 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
FXR1-211ENST00000475315 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
FXR1-211ENST00000475315 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
FXR1-211ENST00000475315 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
FXR1-211ENST00000475315 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
FXR1-211ENST00000475315 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
FXR1-211ENST00000475315 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
FXR1-211ENST00000475315 KANK4Q5T7N3 995 aaPredicted RBP16.41■□□□□ 0.22
FXR1-211ENST00000475315 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
FXR1-211ENST00000475315 ANP32CO43423 234 aa16.4■□□□□ 0.22
FXR1-211ENST00000475315 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
FXR1-211ENST00000475315 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms