RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
PTP4A2-216ENST00000534796 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
PTP4A2-216ENST00000534796 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
PTP4A2-216ENST00000534796 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
PTP4A2-216ENST00000534796 ABCC9O60706 1549 aa23.7■■□□□ 1.38
PTP4A2-216ENST00000534796 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
PTP4A2-216ENST00000534796 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
PTP4A2-216ENST00000534796 RB1CC1Q8TDY2 1594 aa22.64■■□□□ 1.22
PTP4A2-216ENST00000534796 NACADO15069 1562 aa22.51■■□□□ 1.19
PTP4A2-216ENST00000534796 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
PTP4A2-216ENST00000534796 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
PTP4A2-216ENST00000534796 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
PTP4A2-216ENST00000534796 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
PTP4A2-216ENST00000534796 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
PTP4A2-216ENST00000534796 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
PTP4A2-216ENST00000534796 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
PTP4A2-216ENST00000534796 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
PTP4A2-216ENST00000534796 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.07
PTP4A2-216ENST00000534796 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
PTP4A2-216ENST00000534796 FOXD1Q16676 465 aa21.56■■□□□ 1.04
PTP4A2-216ENST00000534796 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
PTP4A2-216ENST00000534796 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
PTP4A2-216ENST00000534796 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
PTP4A2-216ENST00000534796 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
PTP4A2-216ENST00000534796 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
PTP4A2-216ENST00000534796 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
PTP4A2-216ENST00000534796 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
PTP4A2-216ENST00000534796 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
PTP4A2-216ENST00000534796 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
PTP4A2-216ENST00000534796 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
PTP4A2-216ENST00000534796 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
PTP4A2-216ENST00000534796 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
PTP4A2-216ENST00000534796 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
PTP4A2-216ENST00000534796 CUX2O14529 1486 aa20.48■□□□□ 0.87
PTP4A2-216ENST00000534796 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
PTP4A2-216ENST00000534796 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
PTP4A2-216ENST00000534796 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
PTP4A2-216ENST00000534796 NESP48681 1621 aa20.35■□□□□ 0.85
PTP4A2-216ENST00000534796 ADRA2BP18089 450 aa20.35■□□□□ 0.85
PTP4A2-216ENST00000534796 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
PTP4A2-216ENST00000534796 PIAS4Q8N2W9 510 aaPredicted RBP20.22■□□□□ 0.83
PTP4A2-216ENST00000534796 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
PTP4A2-216ENST00000534796 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
PTP4A2-216ENST00000534796 WIZO95785 1651 aa20.14■□□□□ 0.81
PTP4A2-216ENST00000534796 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
PTP4A2-216ENST00000534796 MSH5O43196 834 aa20.07■□□□□ 0.8
PTP4A2-216ENST00000534796 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
PTP4A2-216ENST00000534796 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
PTP4A2-216ENST00000534796 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
PTP4A2-216ENST00000534796 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
PTP4A2-216ENST00000534796 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
PTP4A2-216ENST00000534796 WDR62O43379 1518 aa19.93■□□□□ 0.78
PTP4A2-216ENST00000534796 CFTRP13569 1480 aa19.92■□□□□ 0.78
PTP4A2-216ENST00000534796 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
PTP4A2-216ENST00000534796 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
PTP4A2-216ENST00000534796 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
PTP4A2-216ENST00000534796 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
PTP4A2-216ENST00000534796 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
PTP4A2-216ENST00000534796 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
PTP4A2-216ENST00000534796 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
PTP4A2-216ENST00000534796 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
PTP4A2-216ENST00000534796 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PTP4A2-216ENST00000534796 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
PTP4A2-216ENST00000534796 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
PTP4A2-216ENST00000534796 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
PTP4A2-216ENST00000534796 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
PTP4A2-216ENST00000534796 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
PTP4A2-216ENST00000534796 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
PTP4A2-216ENST00000534796 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTP4A2-216ENST00000534796 SOGA1O94964 1423 aa19.26■□□□□ 0.67
PTP4A2-216ENST00000534796 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
PTP4A2-216ENST00000534796 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
PTP4A2-216ENST00000534796 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
PTP4A2-216ENST00000534796 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
PTP4A2-216ENST00000534796 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
PTP4A2-216ENST00000534796 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
PTP4A2-216ENST00000534796 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
PTP4A2-216ENST00000534796 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
PTP4A2-216ENST00000534796 FBLN2P98095 1184 aa19.19■□□□□ 0.66
PTP4A2-216ENST00000534796 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
PTP4A2-216ENST00000534796 CUX1P39880 1505 aa19.18■□□□□ 0.66
PTP4A2-216ENST00000534796 CHD1O14646 1710 aa19.14■□□□□ 0.65
PTP4A2-216ENST00000534796 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
PTP4A2-216ENST00000534796 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
PTP4A2-216ENST00000534796 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
PTP4A2-216ENST00000534796 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
PTP4A2-216ENST00000534796 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
PTP4A2-216ENST00000534796 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
PTP4A2-216ENST00000534796 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
PTP4A2-216ENST00000534796 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
PTP4A2-216ENST00000534796 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
PTP4A2-216ENST00000534796 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
PTP4A2-216ENST00000534796 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
PTP4A2-216ENST00000534796 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
PTP4A2-216ENST00000534796 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
PTP4A2-216ENST00000534796 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
PTP4A2-216ENST00000534796 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
PTP4A2-216ENST00000534796 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.62
PTP4A2-216ENST00000534796 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
PTP4A2-216ENST00000534796 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms