RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 AEBP2Q6ZN18 517 aaPredicted RBP31.36■■■□□ 2.61
FXR1-220ENST00000491062 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
FXR1-220ENST00000491062 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
FXR1-220ENST00000491062 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
FXR1-220ENST00000491062 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
FXR1-220ENST00000491062 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.6
FXR1-220ENST00000491062 FOXD1Q16676 465 aa24.6■■□□□ 1.53
FXR1-220ENST00000491062 ADRA2BP18089 450 aa23.93■■□□□ 1.42
FXR1-220ENST00000491062 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
FXR1-220ENST00000491062 PIAS4Q8N2W9 510 aaPredicted RBP23.28■■□□□ 1.32
FXR1-220ENST00000491062 MSH5O43196 834 aa22.47■■□□□ 1.19
FXR1-220ENST00000491062 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
FXR1-220ENST00000491062 KCNA4P22459 653 aa22.02■■□□□ 1.12
FXR1-220ENST00000491062 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
FXR1-220ENST00000491062 MAPK8IP2Q13387 824 aaPredicted RBP21.66■■□□□ 1.06
FXR1-220ENST00000491062 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
FXR1-220ENST00000491062 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
FXR1-220ENST00000491062 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
FXR1-220ENST00000491062 CNKSR2Q8WXI2 1034 aa21.45■■□□□ 1.02
FXR1-220ENST00000491062 NPM3O75607 178 aaKnown RBP21.38■■□□□ 1.01
FXR1-220ENST00000491062 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
FXR1-220ENST00000491062 DMRT2Q9Y5R5 561 aa21.15■□□□□ 0.98
FXR1-220ENST00000491062 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
FXR1-220ENST00000491062 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
FXR1-220ENST00000491062 RNF216Q9NWF9 866 aaPredicted RBP20.95■□□□□ 0.94
FXR1-220ENST00000491062 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
FXR1-220ENST00000491062 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
FXR1-220ENST00000491062 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
FXR1-220ENST00000491062 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
FXR1-220ENST00000491062 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
FXR1-220ENST00000491062 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
FXR1-220ENST00000491062 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
FXR1-220ENST00000491062 ABCC9O60706 1549 aa20.36■□□□□ 0.85
FXR1-220ENST00000491062 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
FXR1-220ENST00000491062 ZBTB22O15209 634 aa20.29■□□□□ 0.84
FXR1-220ENST00000491062 HRCP23327 699 aa20.24■□□□□ 0.83
FXR1-220ENST00000491062 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
FXR1-220ENST00000491062 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
FXR1-220ENST00000491062 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
FXR1-220ENST00000491062 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
FXR1-220ENST00000491062 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
FXR1-220ENST00000491062 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
FXR1-220ENST00000491062 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
FXR1-220ENST00000491062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.9■□□□□ 0.784e-6■□□□□ 10.9
FXR1-220ENST00000491062 NACADO15069 1562 aa19.9■□□□□ 0.78
FXR1-220ENST00000491062 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
FXR1-220ENST00000491062 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
FXR1-220ENST00000491062 MYCNP04198 464 aaPredicted RBP19.68■□□□□ 0.74
FXR1-220ENST00000491062 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.74
FXR1-220ENST00000491062 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
FXR1-220ENST00000491062 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
FXR1-220ENST00000491062 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
FXR1-220ENST00000491062 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
FXR1-220ENST00000491062 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.72
FXR1-220ENST00000491062 WIZO95785 1651 aa19.56■□□□□ 0.72
FXR1-220ENST00000491062 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
FXR1-220ENST00000491062 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
FXR1-220ENST00000491062 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
FXR1-220ENST00000491062 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
FXR1-220ENST00000491062 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
FXR1-220ENST00000491062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
FXR1-220ENST00000491062 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
FXR1-220ENST00000491062 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
FXR1-220ENST00000491062 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
FXR1-220ENST00000491062 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
FXR1-220ENST00000491062 ATXN8OSP0DMR3 200 aa19.27■□□□□ 0.68
FXR1-220ENST00000491062 UNC13AQ9UPW8 1703 aa19.27■□□□□ 0.67
FXR1-220ENST00000491062 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
FXR1-220ENST00000491062 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
FXR1-220ENST00000491062 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
FXR1-220ENST00000491062 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
FXR1-220ENST00000491062 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
FXR1-220ENST00000491062 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
FXR1-220ENST00000491062 EEA1Q15075 1411 aa19.04■□□□□ 0.64
FXR1-220ENST00000491062 APLP2Q06481 763 aa19.02■□□□□ 0.64
FXR1-220ENST00000491062 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
FXR1-220ENST00000491062 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
FXR1-220ENST00000491062 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
FXR1-220ENST00000491062 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
FXR1-220ENST00000491062 CAPN15O75808 1086 aa18.94■□□□□ 0.62
FXR1-220ENST00000491062 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
FXR1-220ENST00000491062 SOGA1O94964 1423 aa18.91■□□□□ 0.62
FXR1-220ENST00000491062 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
FXR1-220ENST00000491062 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
FXR1-220ENST00000491062 KIF21BO75037 1637 aa18.81■□□□□ 0.6
FXR1-220ENST00000491062 RUSC2Q8N2Y8 1516 aa18.8■□□□□ 0.6
FXR1-220ENST00000491062 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
FXR1-220ENST00000491062 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
FXR1-220ENST00000491062 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
FXR1-220ENST00000491062 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
FXR1-220ENST00000491062 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
FXR1-220ENST00000491062 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
FXR1-220ENST00000491062 ABCB7O75027 752 aa18.66■□□□□ 0.58
FXR1-220ENST00000491062 POLA2Q14181 598 aa18.65■□□□□ 0.58
FXR1-220ENST00000491062 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
FXR1-220ENST00000491062 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
FXR1-220ENST00000491062 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.57
FXR1-220ENST00000491062 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
FXR1-220ENST00000491062 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
FXR1-220ENST00000491062 CLIP1P30622 1438 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms