Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.671e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-206ENST00000579495 914 ntTSL 217.75■□□□□ 0.434e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-218ENST00000583637 758 ntTSL 317.65■□□□□ 0.421e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-202ENST00000578532 684 ntTSL 217.65■□□□□ 0.421e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-209ENST00000580387 827 ntTSL 515.52■□□□□ 0.084e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-221ENST00000615760 650 ntTSL 315.41■□□□□ 0.064e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-223ENST00000618613 856 ntAPPRIS P1 TSL 315.3■□□□□ 0.041e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC11.68□□□□□ -0.541e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-220ENST00000615479 586 ntTSL 511.09□□□□□ -0.634e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-211ENST00000581305 593 ntTSL 59.39□□□□□ -0.912e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-222ENST00000617346 795 ntTSL 59.26□□□□□ -0.931e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.931e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.97□□□□□ -1.131e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.231e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-217ENST00000583036 576 ntTSL 36.56□□□□□ -1.362e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-215ENST00000582782 562 ntTSL 35.83□□□□□ -1.482e-9■■■■■ 26.8
LARP4Q71RC2 RPL17-203ENST00000578966 563 ntTSL 1 (best)5.43□□□□□ -1.542e-9■■■■■ 26.8
LARP4Q71RC2 NAALADL1-209ENST00000528977 2385 ntTSL 1 (best)17.44■□□□□ 0.387e-7■■■■■ 26.8
LARP4Q71RC2 NAALADL1-210ENST00000529274 2427 ntTSL 1 (best)17.02■□□□□ 0.327e-7■■■■■ 26.8
LARP4Q71RC2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15□□□□□ -0.017e-7■■■■■ 26.8
LARP4Q71RC2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.057e-7■■■■■ 26.8
LARP4Q71RC2 NAALADL1-220ENST00000533753 690 ntTSL 512.9□□□□□ -0.347e-7■■■■■ 26.8
LARP4Q71RC2 NAALADL1-217ENST00000532450 635 ntTSL 511.04□□□□□ -0.647e-7■■■■■ 26.8
LARP4Q71RC2 ATP5J2-211ENST00000523680 84 ntTSL 310.56□□□□□ -0.724e-9■■■■■ 26.8
LARP4Q71RC2 TAF15-206ENST00000603967 656 ntTSL 315.41■□□□□ 0.061e-21■■■■■ 26.8
LARP4Q71RC2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.942e-10■■■■□ 26.7
LARP4Q71RC2 MYL6-208ENST00000547703 675 ntTSL 511.27□□□□□ -0.613e-12■■■■□ 26.7
LARP4Q71RC2 MYL6-212ENST00000548725 582 ntTSL 210.96□□□□□ -0.653e-12■■■■□ 26.7
LARP4Q71RC2 MYL6-214ENST00000549392 411 ntTSL 58.87□□□□□ -0.993e-12■■■■□ 26.7
LARP4Q71RC2 MYL6-221ENST00000552297 454 ntTSL 35.67□□□□□ -1.53e-12■■■■□ 26.7
LARP4Q71RC2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.72■■□□□ 1.391e-6■■■■□ 26.6
LARP4Q71RC2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.242e-9■■■■□ 26.6
LARP4Q71RC2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.01■□□□□ 0.631e-6■■■■□ 26.6
LARP4Q71RC2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.381e-6■■■■□ 26.6
LARP4Q71RC2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.182e-6■■■■□ 26.6
LARP4Q71RC2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.71□□□□□ -0.372e-6■■■■□ 26.6
LARP4Q71RC2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.65□□□□□ -0.382e-6■■■■□ 26.6
LARP4Q71RC2 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.392e-6■■■■□ 26.6
LARP4Q71RC2 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.472e-6■■■■□ 26.6
LARP4Q71RC2 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.961e-6■■■■□ 26.6
LARP4Q71RC2 CENPE-207ENST00000515478 291 ntTSL 57.73□□□□□ -1.172e-9■■■■□ 26.6
LARP4Q71RC2 USP48-206ENST00000464577 2089 ntTSL 27.34□□□□□ -1.232e-9■■■■□ 26.6
LARP4Q71RC2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.432e-6■■■■□ 26.6
LARP4Q71RC2 RNASEK-C17orf49-202ENST00000547863 1662 ntTSL 222.92■■□□□ 1.269e-8■■■■□ 26.6
LARP4Q71RC2 RNASEK-C17orf49-203ENST00000549775 1856 ntTSL 520.51■□□□□ 0.879e-8■■■■□ 26.6
LARP4Q71RC2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.059e-8■■■■□ 26.6
LARP4Q71RC2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.397e-7■■■■□ 26.6
LARP4Q71RC2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.08■□□□□ 0.337e-7■■■■□ 26.6
LARP4Q71RC2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.327e-7■■■■□ 26.6
LARP4Q71RC2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.86■□□□□ 0.297e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.287e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-202ENST00000464720 1665 ntTSL 1 (best)16.46■□□□□ 0.237e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.127e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.047e-7■■■■□ 26.6
LARP4Q71RC2 PACS2-204ENST00000546915 576 ntTSL 414.5□□□□□ -0.097e-7■■■■□ 26.6
LARP4Q71RC2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.142e-6■■■■□ 26.6
LARP4Q71RC2 TMEM222-205ENST00000470223 2841 ntTSL 213.71□□□□□ -0.217e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-206ENST00000471456 2861 ntTSL 213.68□□□□□ -0.227e-7■■■■□ 26.6
LARP4Q71RC2 TMEM222-207ENST00000478104 986 ntTSL 313.1□□□□□ -0.317e-7■■■■□ 26.6
LARP4Q71RC2 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC10.89□□□□□ -0.672e-6■■■■□ 26.6
LARP4Q71RC2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.212e-6■■■■□ 26.6
LARP4Q71RC2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.272e-6■■■■□ 26.6
LARP4Q71RC2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.31□□□□□ -0.282e-6■■■■□ 26.6
LARP4Q71RC2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.382e-6■■■■□ 26.6
LARP4Q71RC2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.19■□□□□ 0.022e-6■■■■□ 26.5
LARP4Q71RC2 AL390334.1-203ENST00000554904 569 ntTSL 46.86□□□□□ -1.312e-6■■■■□ 26.5
LARP4Q71RC2 AL390334.1-202ENST00000553392 674 ntTSL 36.19□□□□□ -1.422e-6■■■■□ 26.5
LARP4Q71RC2 AL390334.1-204ENST00000556890 578 ntTSL 1 (best)6.02□□□□□ -1.452e-6■■■■□ 26.5
LARP4Q71RC2 C4A-257ENST00000491876 880 ntTSL 218.3■□□□□ 0.523e-7■■■■□ 26.5
LARP4Q71RC2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.393e-7■■■■□ 26.5
LARP4Q71RC2 BID-208ENST00000550946 1394 ntTSL 1 (best)16.56■□□□□ 0.243e-7■■■■□ 26.5
LARP4Q71RC2 C4A-246ENST00000463034 1174 ntTSL 515.68■□□□□ 0.13e-7■■■■□ 26.5
LARP4Q71RC2 C4A-250ENST00000469975 830 ntTSL 1 (best)15.29■□□□□ 0.043e-7■■■■□ 26.5
LARP4Q71RC2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -05e-9■■■■□ 26.5
LARP4Q71RC2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.3□□□□□ -0.125e-9■■■■□ 26.5
LARP4Q71RC2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.53□□□□□ -0.243e-7■■■■□ 26.5
LARP4Q71RC2 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-7■■■■□ 26.5
LARP4Q71RC2 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC10.96□□□□□ -0.653e-7■■■■□ 26.5
LARP4Q71RC2 MRPL54-202ENST00000589174 491 ntTSL 39.92□□□□□ -0.823e-7■■■■□ 26.5
LARP4Q71RC2 RPL17-207ENST00000580210 705 ntTSL 2 BASIC9.25□□□□□ -0.931e-9■■■■□ 26.5
LARP4Q71RC2 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -11e-9■■■■□ 26.5
LARP4Q71RC2 COX6A1-203ENST00000550009 572 ntTSL 214.47□□□□□ -0.092e-7■■■■□ 26.4
LARP4Q71RC2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.12e-6■■■■□ 26.4
LARP4Q71RC2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.98□□□□□ -0.492e-6■■■■□ 26.4
LARP4Q71RC2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.192e-6■■■■□ 26.4
LARP4Q71RC2 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 518.26■□□□□ 0.511e-7■■■■□ 26.4
LARP4Q71RC2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.11e-7■■■■□ 26.4
LARP4Q71RC2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.351e-7■■■■□ 26.4
LARP4Q71RC2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.621e-7■■■■□ 26.4
LARP4Q71RC2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.16■□□□□ 0.022e-12■■■■□ 26.4
LARP4Q71RC2 FSCN1-205ENST00000473330 2215 ntTSL 220.55■□□□□ 0.881e-7■■■■□ 26.4
LARP4Q71RC2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.321e-7■■■■□ 26.4
LARP4Q71RC2 SERPINA6-202ENST00000555056 1609 ntTSL 27.4□□□□□ -1.223e-7■■■■□ 26.4
LARP4Q71RC2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.253e-7■■■■□ 26.4
LARP4Q71RC2 SYNGR2-205ENST00000589183 796 ntTSL 316.77■□□□□ 0.285e-7■■■■□ 26.2
LARP4Q71RC2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.03■□□□□ -04e-6■■■■□ 26.2
LARP4Q71RC2 CECR7-201ENST00000414401 546 ntTSL 414.81□□□□□ -0.044e-6■■■■□ 26.2
LARP4Q71RC2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.1□□□□□ -0.154e-6■■■■□ 26.2
LARP4Q71RC2 CECR7-203ENST00000609596 2283 ntTSL 511.18□□□□□ -0.624e-6■■■■□ 26.2
LARP4Q71RC2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.042e-6■■■■□ 26.2
Retrieved 100 of 15,922 protein–RNA pairs in 494.5 ms