RNA–Protein interactions for RNA: ENST00000430725.6

PACS2-202, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 2,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-202ENST00000430725 NISCHQ9Y2I1 1504 aa36.04■■■■□ 3.36
PACS2-202ENST00000430725 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
PACS2-202ENST00000430725 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
PACS2-202ENST00000430725 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
PACS2-202ENST00000430725 DCAF8L2P0C7V8 631 aa30.33■■■□□ 2.45
PACS2-202ENST00000430725 SUPT5HO00267 1087 aaKnown RBP30■■■□□ 2.39
PACS2-202ENST00000430725 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
PACS2-202ENST00000430725 ABCC9O60706 1549 aa29.14■■■□□ 2.25
PACS2-202ENST00000430725 SCRIBQ14160 1630 aa28.95■■■□□ 2.22
PACS2-202ENST00000430725 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
PACS2-202ENST00000430725 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
PACS2-202ENST00000430725 NACADO15069 1562 aa28.62■■■□□ 2.17
PACS2-202ENST00000430725 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
PACS2-202ENST00000430725 RB1CC1Q8TDY2 1594 aa28.29■■■□□ 2.12
PACS2-202ENST00000430725 LOC105371045A0A1W2PR82 267 aa28.29■■■□□ 2.12
PACS2-202ENST00000430725 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
PACS2-202ENST00000430725 PCGF6Q9BYE7 350 aa28.13■■■□□ 2.09
PACS2-202ENST00000430725 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
PACS2-202ENST00000430725 WIZO95785 1651 aa27.88■■■□□ 2.05
PACS2-202ENST00000430725 HRCP23327 699 aa27.85■■■□□ 2.05
PACS2-202ENST00000430725 PABPN1Q86U42 306 aaKnown RBP eCLIP27.84■■■□□ 2.051e-6■■■■□ 24.5
PACS2-202ENST00000430725 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
PACS2-202ENST00000430725 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
PACS2-202ENST00000430725 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
PACS2-202ENST00000430725 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
PACS2-202ENST00000430725 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
PACS2-202ENST00000430725 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
PACS2-202ENST00000430725 SMARCA4P51532 1647 aa27.55■■■□□ 2
PACS2-202ENST00000430725 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
PACS2-202ENST00000430725 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
PACS2-202ENST00000430725 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
PACS2-202ENST00000430725 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
PACS2-202ENST00000430725 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
PACS2-202ENST00000430725 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
PACS2-202ENST00000430725 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
PACS2-202ENST00000430725 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
PACS2-202ENST00000430725 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.91
PACS2-202ENST00000430725 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
PACS2-202ENST00000430725 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
PACS2-202ENST00000430725 SOGA1O94964 1423 aa26.78■■□□□ 1.88
PACS2-202ENST00000430725 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.86
PACS2-202ENST00000430725 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
PACS2-202ENST00000430725 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
PACS2-202ENST00000430725 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
PACS2-202ENST00000430725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
PACS2-202ENST00000430725 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
PACS2-202ENST00000430725 ZEB1P37275 1124 aaPredicted RBP26.52■■□□□ 1.84
PACS2-202ENST00000430725 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
PACS2-202ENST00000430725 EEA1Q15075 1411 aa26.45■■□□□ 1.83
PACS2-202ENST00000430725 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
PACS2-202ENST00000430725 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
PACS2-202ENST00000430725 CCER1Q8TC90 406 aaPredicted RBP26.36■■□□□ 1.81
PACS2-202ENST00000430725 TNIKQ9UKE5 1360 aa26.36■■□□□ 1.81
PACS2-202ENST00000430725 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
PACS2-202ENST00000430725 GOLGA3Q08378 1498 aa26.32■■□□□ 1.8
PACS2-202ENST00000430725 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
PACS2-202ENST00000430725 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
PACS2-202ENST00000430725 CFTRP13569 1480 aa26.17■■□□□ 1.78
PACS2-202ENST00000430725 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
PACS2-202ENST00000430725 RAPGEF2Q9Y4G8 1499 aa26.13■■□□□ 1.77
PACS2-202ENST00000430725 CUX1P39880 1505 aa26.13■■□□□ 1.77
PACS2-202ENST00000430725 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
PACS2-202ENST00000430725 KIF21BO75037 1637 aa26.11■■□□□ 1.77
PACS2-202ENST00000430725 CLIP1P30622 1438 aa26.04■■□□□ 1.76
PACS2-202ENST00000430725 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
PACS2-202ENST00000430725 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
PACS2-202ENST00000430725 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
PACS2-202ENST00000430725 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.73
PACS2-202ENST00000430725 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
PACS2-202ENST00000430725 PRXQ9BXM0 1461 aa25.86■■□□□ 1.73
PACS2-202ENST00000430725 APLP2Q06481 763 aa25.84■■□□□ 1.73
PACS2-202ENST00000430725 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
PACS2-202ENST00000430725 CUX2O14529 1486 aa25.81■■□□□ 1.72
PACS2-202ENST00000430725 NESP48681 1621 aa25.8■■□□□ 1.72
PACS2-202ENST00000430725 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
PACS2-202ENST00000430725 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
PACS2-202ENST00000430725 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
PACS2-202ENST00000430725 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
PACS2-202ENST00000430725 DIEXFQ68CQ4 756 aaKnown RBP25.74■■□□□ 1.71
PACS2-202ENST00000430725 IGF1RP08069 1367 aa25.67■■□□□ 1.7
PACS2-202ENST00000430725 PELP1Q8IZL8 1130 aaKnown RBP25.64■■□□□ 1.7
PACS2-202ENST00000430725 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
PACS2-202ENST00000430725 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
PACS2-202ENST00000430725 KANK4Q5T7N3 995 aaPredicted RBP25.59■■□□□ 1.69
PACS2-202ENST00000430725 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
PACS2-202ENST00000430725 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
PACS2-202ENST00000430725 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
PACS2-202ENST00000430725 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
PACS2-202ENST00000430725 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
PACS2-202ENST00000430725 ARHGAP35Q9NRY4 1499 aa25.5■■□□□ 1.67
PACS2-202ENST00000430725 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
PACS2-202ENST00000430725 P3H3Q8IVL6 736 aa25.46■■□□□ 1.67
PACS2-202ENST00000430725 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
PACS2-202ENST00000430725 ITGAEP38570 1179 aa25.43■■□□□ 1.66
PACS2-202ENST00000430725 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
PACS2-202ENST00000430725 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
PACS2-202ENST00000430725 YTHDC1Q96MU7 727 aaKnown RBP25.41■■□□□ 1.66
PACS2-202ENST00000430725 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.65
PACS2-202ENST00000430725 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
PACS2-202ENST00000430725 ATP1B4Q9UN42 357 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms