RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.56
PACS2-203ENST00000447393 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
PACS2-203ENST00000447393 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
PACS2-203ENST00000447393 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
PACS2-203ENST00000447393 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PACS2-203ENST00000447393 APLP2Q06481 763 aa27.92■■■□□ 2.06
PACS2-203ENST00000447393 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
PACS2-203ENST00000447393 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
PACS2-203ENST00000447393 TTBK1Q5TCY1 1321 aaPredicted RBP27.58■■■□□ 2.01
PACS2-203ENST00000447393 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
PACS2-203ENST00000447393 PCGF6Q9BYE7 350 aa27.14■■□□□ 1.94
PACS2-203ENST00000447393 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.93
PACS2-203ENST00000447393 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
PACS2-203ENST00000447393 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
PACS2-203ENST00000447393 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
PACS2-203ENST00000447393 ERICH6Q7L0X2 663 aa26.74■■□□□ 1.87
PACS2-203ENST00000447393 CENPBP07199 599 aaPredicted RBP26.65■■□□□ 1.86
PACS2-203ENST00000447393 ZEB1P37275 1124 aaPredicted RBP26.53■■□□□ 1.84
PACS2-203ENST00000447393 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
PACS2-203ENST00000447393 YTHDC1Q96MU7 727 aaKnown RBP26.32■■□□□ 1.8
PACS2-203ENST00000447393 NEFLP07196 543 aa26.31■■□□□ 1.8
PACS2-203ENST00000447393 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
PACS2-203ENST00000447393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
PACS2-203ENST00000447393 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
PACS2-203ENST00000447393 ITGAEP38570 1179 aa26.07■■□□□ 1.76
PACS2-203ENST00000447393 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
PACS2-203ENST00000447393 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
PACS2-203ENST00000447393 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
PACS2-203ENST00000447393 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
PACS2-203ENST00000447393 DAXXQ9UER7 740 aaPredicted RBP25.69■■□□□ 1.7
PACS2-203ENST00000447393 SLC4A1APQ9BWU0 796 aaKnown RBP25.64■■□□□ 1.7
PACS2-203ENST00000447393 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
PACS2-203ENST00000447393 HRCP23327 699 aa25.46■■□□□ 1.67
PACS2-203ENST00000447393 MYT1Q01538 1121 aa25.36■■□□□ 1.65
PACS2-203ENST00000447393 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
PACS2-203ENST00000447393 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
PACS2-203ENST00000447393 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.631e-6■■■■□ 24.5
PACS2-203ENST00000447393 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
PACS2-203ENST00000447393 NEUROD1Q13562 356 aa25.08■■□□□ 1.61
PACS2-203ENST00000447393 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
PACS2-203ENST00000447393 FBLN2P98095 1184 aa25.05■■□□□ 1.6
PACS2-203ENST00000447393 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
PACS2-203ENST00000447393 ABCC9O60706 1549 aa24.99■■□□□ 1.59
PACS2-203ENST00000447393 DIEXFQ68CQ4 756 aaKnown RBP24.98■■□□□ 1.59
PACS2-203ENST00000447393 RTL5Q5HYW3 569 aaPredicted RBP24.9■■□□□ 1.58
PACS2-203ENST00000447393 SLC24A1O60721 1099 aa24.83■■□□□ 1.57
PACS2-203ENST00000447393 BCANQ96GW7 911 aa24.8■■□□□ 1.56
PACS2-203ENST00000447393 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
PACS2-203ENST00000447393 ZBTB47Q9UFB7 747 aaPredicted RBP24.76■■□□□ 1.55
PACS2-203ENST00000447393 BCL11AQ9H165 835 aa24.76■■□□□ 1.55
PACS2-203ENST00000447393 ANP32CO43423 234 aa24.71■■□□□ 1.55
PACS2-203ENST00000447393 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
PACS2-203ENST00000447393 CANXP27824 592 aaKnown RBP24.61■■□□□ 1.53
PACS2-203ENST00000447393 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
PACS2-203ENST00000447393 NEFMP07197 916 aa24.57■■□□□ 1.52
PACS2-203ENST00000447393 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
PACS2-203ENST00000447393 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
PACS2-203ENST00000447393 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
PACS2-203ENST00000447393 GTF3C3Q9Y5Q9 886 aa24.39■■□□□ 1.5
PACS2-203ENST00000447393 CHGAP10645 457 aaKnown RBP24.34■■□□□ 1.49
PACS2-203ENST00000447393 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
PACS2-203ENST00000447393 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
PACS2-203ENST00000447393 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
PACS2-203ENST00000447393 NPM2Q86SE8 214 aaKnown RBP24.13■■□□□ 1.45
PACS2-203ENST00000447393 ANP32AP39687 249 aaKnown RBP24.08■■□□□ 1.44
PACS2-203ENST00000447393 TONSLQ96HA7 1378 aa24.05■■□□□ 1.44
PACS2-203ENST00000447393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.441e-6■■□□□ 14.1
PACS2-203ENST00000447393 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
PACS2-203ENST00000447393 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
PACS2-203ENST00000447393 HSP90AA1P07900 732 aaKnown RBP23.96■■□□□ 1.43
PACS2-203ENST00000447393 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
PACS2-203ENST00000447393 HNRNPUQ00839 825 aaKnown RBP eCLIP23.92■■□□□ 1.42
PACS2-203ENST00000447393 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
PACS2-203ENST00000447393 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.42
PACS2-203ENST00000447393 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
PACS2-203ENST00000447393 FKBP8Q14318 412 aa23.88■■□□□ 1.41
PACS2-203ENST00000447393 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
PACS2-203ENST00000447393 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
PACS2-203ENST00000447393 UPF2Q9HAU5 1272 aaKnown RBP23.83■■□□□ 1.41
PACS2-203ENST00000447393 A0A0G2JS52 829 aa23.81■■□□□ 1.4
PACS2-203ENST00000447393 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
PACS2-203ENST00000447393 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
PACS2-203ENST00000447393 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
PACS2-203ENST00000447393 TMC1Q8TDI8 760 aa23.8■■□□□ 1.4
PACS2-203ENST00000447393 ANP32BQ92688 251 aaKnown RBP23.8■■□□□ 1.4
PACS2-203ENST00000447393 PLEKHG5O94827 1062 aa23.78■■□□□ 1.4
PACS2-203ENST00000447393 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
PACS2-203ENST00000447393 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
PACS2-203ENST00000447393 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
PACS2-203ENST00000447393 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.69■■□□□ 1.38
PACS2-203ENST00000447393 MTUS2Q5JR59 1369 aa23.67■■□□□ 1.38
PACS2-203ENST00000447393 C14orf37Q86TY3 774 aa23.65■■□□□ 1.38
PACS2-203ENST00000447393 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
PACS2-203ENST00000447393 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
PACS2-203ENST00000447393 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
PACS2-203ENST00000447393 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
PACS2-203ENST00000447393 HIRIP3Q9BW71 556 aaPredicted RBP23.59■■□□□ 1.37
PACS2-203ENST00000447393 RRP7BPQ9NSQ0 103 aa23.56■■□□□ 1.36
PACS2-203ENST00000447393 EIF5BO60841 1220 aaKnown RBP23.55■■□□□ 1.36
PACS2-203ENST00000447393 ARXQ96QS3 562 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms