RNA–Protein interactions for RNA: ENST00000232219.6

RBP1-201, Transcript of retinol binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene RBP1, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1-201ENST00000232219 NISCHQ9Y2I1 1504 aa30.37■■■□□ 2.45
RBP1-201ENST00000232219 ABCC9O60706 1549 aa27.31■■□□□ 1.96
RBP1-201ENST00000232219 CCDC180Q9P1Z9 1646 aa27.28■■□□□ 1.96
RBP1-201ENST00000232219 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
RBP1-201ENST00000232219 NACADO15069 1562 aa25.78■■□□□ 1.72
RBP1-201ENST00000232219 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
RBP1-201ENST00000232219 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
RBP1-201ENST00000232219 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
RBP1-201ENST00000232219 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
RBP1-201ENST00000232219 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
RBP1-201ENST00000232219 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
RBP1-201ENST00000232219 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
RBP1-201ENST00000232219 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
RBP1-201ENST00000232219 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
RBP1-201ENST00000232219 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
RBP1-201ENST00000232219 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
RBP1-201ENST00000232219 EIF4G1Q04637 1599 aaKnown RBP24.62■■□□□ 1.53
RBP1-201ENST00000232219 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
RBP1-201ENST00000232219 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
RBP1-201ENST00000232219 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
RBP1-201ENST00000232219 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
RBP1-201ENST00000232219 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
RBP1-201ENST00000232219 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
RBP1-201ENST00000232219 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
RBP1-201ENST00000232219 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
RBP1-201ENST00000232219 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
RBP1-201ENST00000232219 CUX2O14529 1486 aa23.54■■□□□ 1.36
RBP1-201ENST00000232219 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
RBP1-201ENST00000232219 NESP48681 1621 aa23.48■■□□□ 1.35
RBP1-201ENST00000232219 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
RBP1-201ENST00000232219 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
RBP1-201ENST00000232219 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
RBP1-201ENST00000232219 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
RBP1-201ENST00000232219 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
RBP1-201ENST00000232219 WIZO95785 1651 aa23.15■■□□□ 1.3
RBP1-201ENST00000232219 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
RBP1-201ENST00000232219 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
RBP1-201ENST00000232219 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
RBP1-201ENST00000232219 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
RBP1-201ENST00000232219 WDR62O43379 1518 aa22.9■■□□□ 1.26
RBP1-201ENST00000232219 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
RBP1-201ENST00000232219 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
RBP1-201ENST00000232219 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
RBP1-201ENST00000232219 CFTRP13569 1480 aa22.8■■□□□ 1.24
RBP1-201ENST00000232219 URB2Q14146 1524 aaKnown RBP22.65■■□□□ 1.22
RBP1-201ENST00000232219 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
RBP1-201ENST00000232219 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
RBP1-201ENST00000232219 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
RBP1-201ENST00000232219 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
RBP1-201ENST00000232219 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
RBP1-201ENST00000232219 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
RBP1-201ENST00000232219 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
RBP1-201ENST00000232219 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
RBP1-201ENST00000232219 DNMBPQ6XZF7 1577 aa22.3■■□□□ 1.16
RBP1-201ENST00000232219 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
RBP1-201ENST00000232219 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
RBP1-201ENST00000232219 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
RBP1-201ENST00000232219 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
RBP1-201ENST00000232219 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
RBP1-201ENST00000232219 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.14
RBP1-201ENST00000232219 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
RBP1-201ENST00000232219 CHD1O14646 1710 aa22.12■■□□□ 1.13
RBP1-201ENST00000232219 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
RBP1-201ENST00000232219 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
RBP1-201ENST00000232219 SOGA1O94964 1423 aa22.05■■□□□ 1.12
RBP1-201ENST00000232219 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
RBP1-201ENST00000232219 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
RBP1-201ENST00000232219 FBLN2P98095 1184 aa22■■□□□ 1.11
RBP1-201ENST00000232219 CUX1P39880 1505 aa22■■□□□ 1.11
RBP1-201ENST00000232219 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
RBP1-201ENST00000232219 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
RBP1-201ENST00000232219 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
RBP1-201ENST00000232219 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
RBP1-201ENST00000232219 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
RBP1-201ENST00000232219 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
RBP1-201ENST00000232219 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
RBP1-201ENST00000232219 CLASP1Q7Z460 1538 aa21.84■■□□□ 1.09
RBP1-201ENST00000232219 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
RBP1-201ENST00000232219 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
RBP1-201ENST00000232219 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
RBP1-201ENST00000232219 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
RBP1-201ENST00000232219 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
RBP1-201ENST00000232219 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
RBP1-201ENST00000232219 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
RBP1-201ENST00000232219 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
RBP1-201ENST00000232219 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
RBP1-201ENST00000232219 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
RBP1-201ENST00000232219 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
RBP1-201ENST00000232219 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
RBP1-201ENST00000232219 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
RBP1-201ENST00000232219 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
RBP1-201ENST00000232219 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
RBP1-201ENST00000232219 NUP160Q12769 1436 aa21.51■■□□□ 1.03
RBP1-201ENST00000232219 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
RBP1-201ENST00000232219 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
RBP1-201ENST00000232219 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
RBP1-201ENST00000232219 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
RBP1-201ENST00000232219 JPH4Q96JJ6 628 aa21.28■■□□□ 1
RBP1-201ENST00000232219 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
RBP1-201ENST00000232219 IGF1RP08069 1367 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms