RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
TSPO-201ENST00000329563 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
TSPO-201ENST00000329563 ABCC9O60706 1549 aa32.45■■■□□ 2.78
TSPO-201ENST00000329563 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
TSPO-201ENST00000329563 NACADO15069 1562 aa30.81■■■□□ 2.52
TSPO-201ENST00000329563 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
TSPO-201ENST00000329563 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
TSPO-201ENST00000329563 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
TSPO-201ENST00000329563 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
TSPO-201ENST00000329563 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
TSPO-201ENST00000329563 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
TSPO-201ENST00000329563 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
TSPO-201ENST00000329563 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
TSPO-201ENST00000329563 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
TSPO-201ENST00000329563 SHROOM4Q9ULL8 1493 aa29.78■■■□□ 2.36
TSPO-201ENST00000329563 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
TSPO-201ENST00000329563 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
TSPO-201ENST00000329563 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
TSPO-201ENST00000329563 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
TSPO-201ENST00000329563 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
TSPO-201ENST00000329563 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
TSPO-201ENST00000329563 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
TSPO-201ENST00000329563 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
TSPO-201ENST00000329563 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
TSPO-201ENST00000329563 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
TSPO-201ENST00000329563 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
TSPO-201ENST00000329563 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
TSPO-201ENST00000329563 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
TSPO-201ENST00000329563 CUX2O14529 1486 aa28.07■■■□□ 2.08
TSPO-201ENST00000329563 NESP48681 1621 aa27.99■■■□□ 2.07
TSPO-201ENST00000329563 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
TSPO-201ENST00000329563 WIZO95785 1651 aa27.91■■■□□ 2.06
TSPO-201ENST00000329563 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
TSPO-201ENST00000329563 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
TSPO-201ENST00000329563 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
TSPO-201ENST00000329563 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
TSPO-201ENST00000329563 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
TSPO-201ENST00000329563 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
TSPO-201ENST00000329563 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
TSPO-201ENST00000329563 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
TSPO-201ENST00000329563 CFTRP13569 1480 aa27.36■■□□□ 1.97
TSPO-201ENST00000329563 WDR62O43379 1518 aa27.3■■□□□ 1.96
TSPO-201ENST00000329563 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
TSPO-201ENST00000329563 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
TSPO-201ENST00000329563 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
TSPO-201ENST00000329563 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
TSPO-201ENST00000329563 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
TSPO-201ENST00000329563 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
TSPO-201ENST00000329563 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
TSPO-201ENST00000329563 OSCARQ8IYS5 282 aa26.74■■□□□ 1.87
TSPO-201ENST00000329563 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
TSPO-201ENST00000329563 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
TSPO-201ENST00000329563 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
TSPO-201ENST00000329563 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
TSPO-201ENST00000329563 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
TSPO-201ENST00000329563 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
TSPO-201ENST00000329563 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
TSPO-201ENST00000329563 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
TSPO-201ENST00000329563 CUX1P39880 1505 aa26.49■■□□□ 1.83
TSPO-201ENST00000329563 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
TSPO-201ENST00000329563 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.831e-6■■■■□ 25.3
TSPO-201ENST00000329563 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
TSPO-201ENST00000329563 SOGA1O94964 1423 aa26.4■■□□□ 1.82
TSPO-201ENST00000329563 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.82
TSPO-201ENST00000329563 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.82
TSPO-201ENST00000329563 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.82
TSPO-201ENST00000329563 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
TSPO-201ENST00000329563 CHD1O14646 1710 aa26.34■■□□□ 1.81
TSPO-201ENST00000329563 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
TSPO-201ENST00000329563 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
TSPO-201ENST00000329563 FBLN2P98095 1184 aa26.22■■□□□ 1.79
TSPO-201ENST00000329563 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
TSPO-201ENST00000329563 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
TSPO-201ENST00000329563 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
TSPO-201ENST00000329563 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
TSPO-201ENST00000329563 GRIN2BQ13224 1484 aa26.14■■□□□ 1.78
TSPO-201ENST00000329563 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
TSPO-201ENST00000329563 MAGI1Q96QZ7 1491 aaPredicted RBP26.13■■□□□ 1.77
TSPO-201ENST00000329563 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
TSPO-201ENST00000329563 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
TSPO-201ENST00000329563 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
TSPO-201ENST00000329563 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
TSPO-201ENST00000329563 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
TSPO-201ENST00000329563 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
TSPO-201ENST00000329563 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
TSPO-201ENST00000329563 CLASP1Q7Z460 1538 aa26.04■■□□□ 1.76
TSPO-201ENST00000329563 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
TSPO-201ENST00000329563 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
TSPO-201ENST00000329563 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
TSPO-201ENST00000329563 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
TSPO-201ENST00000329563 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
TSPO-201ENST00000329563 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
TSPO-201ENST00000329563 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
TSPO-201ENST00000329563 NUP160Q12769 1436 aa25.75■■□□□ 1.71
TSPO-201ENST00000329563 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
TSPO-201ENST00000329563 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
TSPO-201ENST00000329563 IGF1RP08069 1367 aa25.56■■□□□ 1.68
TSPO-201ENST00000329563 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
TSPO-201ENST00000329563 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
TSPO-201ENST00000329563 CUL7Q14999 1698 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms