RNA–Protein interactions for RNA: ENST00000581305.1

RPL17-211, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-211ENST00000581305 AEBP2Q6ZN18 517 aaPredicted RBP31.62■■■□□ 2.65
RPL17-211ENST00000581305 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
RPL17-211ENST00000581305 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
RPL17-211ENST00000581305 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
RPL17-211ENST00000581305 FOXD1Q16676 465 aa24.97■■□□□ 1.59
RPL17-211ENST00000581305 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
RPL17-211ENST00000581305 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
RPL17-211ENST00000581305 ADRA2BP18089 450 aa23.87■■□□□ 1.41
RPL17-211ENST00000581305 PIAS4Q8N2W9 510 aaPredicted RBP23.52■■□□□ 1.36
RPL17-211ENST00000581305 MSH5O43196 834 aa23.06■■□□□ 1.28
RPL17-211ENST00000581305 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
RPL17-211ENST00000581305 PPP4R3CPQ6ZMV5 832 aa21.87■■□□□ 1.09
RPL17-211ENST00000581305 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
RPL17-211ENST00000581305 MAPK8IP2Q13387 824 aaPredicted RBP21.74■■□□□ 1.07
RPL17-211ENST00000581305 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
RPL17-211ENST00000581305 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
RPL17-211ENST00000581305 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
RPL17-211ENST00000581305 NCBP3Q53F19 620 aaKnown RBP21.2■□□□□ 0.98
RPL17-211ENST00000581305 KCNA4P22459 653 aa21.15■□□□□ 0.98
RPL17-211ENST00000581305 ABCC9O60706 1549 aa21.14■□□□□ 0.98
RPL17-211ENST00000581305 NPM3O75607 178 aaKnown RBP20.92■□□□□ 0.94
RPL17-211ENST00000581305 RNF216Q9NWF9 866 aaPredicted RBP20.89■□□□□ 0.93
RPL17-211ENST00000581305 HOXD11P31277 338 aaPredicted RBP20.84■□□□□ 0.93
RPL17-211ENST00000581305 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
RPL17-211ENST00000581305 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
RPL17-211ENST00000581305 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
RPL17-211ENST00000581305 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
RPL17-211ENST00000581305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
RPL17-211ENST00000581305 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
RPL17-211ENST00000581305 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
RPL17-211ENST00000581305 RNF39Q9H2S5 420 aa19.74■□□□□ 0.75
RPL17-211ENST00000581305 NACADO15069 1562 aa19.72■□□□□ 0.75
RPL17-211ENST00000581305 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
RPL17-211ENST00000581305 U3KPZ7 1027 aaPredicted RBP19.57■□□□□ 0.72
RPL17-211ENST00000581305 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
RPL17-211ENST00000581305 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
RPL17-211ENST00000581305 C1QBPQ07021 282 aaKnown RBP19.48■□□□□ 0.71
RPL17-211ENST00000581305 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
RPL17-211ENST00000581305 ZBTB22O15209 634 aa19.44■□□□□ 0.7
RPL17-211ENST00000581305 CACNB1Q02641 598 aaPredicted RBP19.44■□□□□ 0.7
RPL17-211ENST00000581305 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
RPL17-211ENST00000581305 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
RPL17-211ENST00000581305 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
RPL17-211ENST00000581305 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
RPL17-211ENST00000581305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
RPL17-211ENST00000581305 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
RPL17-211ENST00000581305 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
RPL17-211ENST00000581305 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
RPL17-211ENST00000581305 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
RPL17-211ENST00000581305 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
RPL17-211ENST00000581305 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
RPL17-211ENST00000581305 CC2D2AQ9P2K1 1620 aa19.08■□□□□ 0.65
RPL17-211ENST00000581305 CAPN15O75808 1086 aa19.07■□□□□ 0.64
RPL17-211ENST00000581305 APLP2Q06481 763 aa19.05■□□□□ 0.64
RPL17-211ENST00000581305 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
RPL17-211ENST00000581305 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
RPL17-211ENST00000581305 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
RPL17-211ENST00000581305 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
RPL17-211ENST00000581305 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
RPL17-211ENST00000581305 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
RPL17-211ENST00000581305 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
RPL17-211ENST00000581305 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
RPL17-211ENST00000581305 ATXN8OSP0DMR3 200 aa18.76■□□□□ 0.59
RPL17-211ENST00000581305 DSG3P32926 999 aa18.74■□□□□ 0.59
RPL17-211ENST00000581305 ABCB7O75027 752 aa18.71■□□□□ 0.59
RPL17-211ENST00000581305 POLA2Q14181 598 aa18.56■□□□□ 0.56
RPL17-211ENST00000581305 CUX2O14529 1486 aa18.37■□□□□ 0.53
RPL17-211ENST00000581305 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
RPL17-211ENST00000581305 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
RPL17-211ENST00000581305 ZBTB12Q9Y330 459 aaPredicted RBP18.15■□□□□ 0.5
RPL17-211ENST00000581305 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
RPL17-211ENST00000581305 NESP48681 1621 aa18.08■□□□□ 0.48
RPL17-211ENST00000581305 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
RPL17-211ENST00000581305 FBLN2P98095 1184 aa18.05■□□□□ 0.48
RPL17-211ENST00000581305 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
RPL17-211ENST00000581305 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
RPL17-211ENST00000581305 SMARCA4P51532 1647 aa18■□□□□ 0.47
RPL17-211ENST00000581305 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
RPL17-211ENST00000581305 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
RPL17-211ENST00000581305 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
RPL17-211ENST00000581305 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
RPL17-211ENST00000581305 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
RPL17-211ENST00000581305 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
RPL17-211ENST00000581305 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
RPL17-211ENST00000581305 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
RPL17-211ENST00000581305 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
RPL17-211ENST00000581305 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
RPL17-211ENST00000581305 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
RPL17-211ENST00000581305 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
RPL17-211ENST00000581305 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
RPL17-211ENST00000581305 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
RPL17-211ENST00000581305 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
RPL17-211ENST00000581305 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
RPL17-211ENST00000581305 WDR62O43379 1518 aa17.63■□□□□ 0.41
RPL17-211ENST00000581305 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
RPL17-211ENST00000581305 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
RPL17-211ENST00000581305 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
RPL17-211ENST00000581305 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
RPL17-211ENST00000581305 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
RPL17-211ENST00000581305 WIZO95785 1651 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms