RNA–Protein interactions for RNA: ENST00000580261.5

RPL17-208, Transcript of ribosomal protein L17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL17, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-208ENST00000580261 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
RPL17-208ENST00000580261 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
RPL17-208ENST00000580261 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
RPL17-208ENST00000580261 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
RPL17-208ENST00000580261 FOXD1Q16676 465 aa16.69■□□□□ 0.26
RPL17-208ENST00000580261 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
RPL17-208ENST00000580261 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
RPL17-208ENST00000580261 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
RPL17-208ENST00000580261 ADRA2BP18089 450 aa15.63■□□□□ 0.09
RPL17-208ENST00000580261 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
RPL17-208ENST00000580261 MSH5O43196 834 aa15.53■□□□□ 0.08
RPL17-208ENST00000580261 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
RPL17-208ENST00000580261 CCDC180Q9P1Z9 1646 aa14.47□□□□□ -0.09
RPL17-208ENST00000580261 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
RPL17-208ENST00000580261 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
RPL17-208ENST00000580261 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
RPL17-208ENST00000580261 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
RPL17-208ENST00000580261 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
RPL17-208ENST00000580261 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
RPL17-208ENST00000580261 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
RPL17-208ENST00000580261 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
RPL17-208ENST00000580261 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
RPL17-208ENST00000580261 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
RPL17-208ENST00000580261 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
RPL17-208ENST00000580261 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
RPL17-208ENST00000580261 ABCC9O60706 1549 aa13.58□□□□□ -0.24
RPL17-208ENST00000580261 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
RPL17-208ENST00000580261 NACADO15069 1562 aa13.46□□□□□ -0.25
RPL17-208ENST00000580261 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
RPL17-208ENST00000580261 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
RPL17-208ENST00000580261 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
RPL17-208ENST00000580261 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
RPL17-208ENST00000580261 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
RPL17-208ENST00000580261 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
RPL17-208ENST00000580261 RNF39Q9H2S5 420 aa13.28□□□□□ -0.28
RPL17-208ENST00000580261 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
RPL17-208ENST00000580261 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
RPL17-208ENST00000580261 KCNA4P22459 653 aa13.1□□□□□ -0.31
RPL17-208ENST00000580261 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
RPL17-208ENST00000580261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.328e-26■■□□□ 12.2
RPL17-208ENST00000580261 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
RPL17-208ENST00000580261 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
RPL17-208ENST00000580261 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
RPL17-208ENST00000580261 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
RPL17-208ENST00000580261 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
RPL17-208ENST00000580261 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
RPL17-208ENST00000580261 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
RPL17-208ENST00000580261 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPL17-208ENST00000580261 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
RPL17-208ENST00000580261 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
RPL17-208ENST00000580261 WIZO95785 1651 aa12.75□□□□□ -0.37
RPL17-208ENST00000580261 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
RPL17-208ENST00000580261 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
RPL17-208ENST00000580261 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
RPL17-208ENST00000580261 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
RPL17-208ENST00000580261 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
RPL17-208ENST00000580261 CAPN15O75808 1086 aa12.57□□□□□ -0.4
RPL17-208ENST00000580261 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
RPL17-208ENST00000580261 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
RPL17-208ENST00000580261 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
RPL17-208ENST00000580261 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
RPL17-208ENST00000580261 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
RPL17-208ENST00000580261 DSG3P32926 999 aa12.47□□□□□ -0.41
RPL17-208ENST00000580261 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
RPL17-208ENST00000580261 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
RPL17-208ENST00000580261 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
RPL17-208ENST00000580261 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
RPL17-208ENST00000580261 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
RPL17-208ENST00000580261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
RPL17-208ENST00000580261 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
RPL17-208ENST00000580261 APLP2Q06481 763 aa12.33□□□□□ -0.44
RPL17-208ENST00000580261 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
RPL17-208ENST00000580261 ABCB7O75027 752 aa12.3□□□□□ -0.44
RPL17-208ENST00000580261 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
RPL17-208ENST00000580261 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
RPL17-208ENST00000580261 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
RPL17-208ENST00000580261 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
RPL17-208ENST00000580261 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
RPL17-208ENST00000580261 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
RPL17-208ENST00000580261 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
RPL17-208ENST00000580261 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.462e-6■■■□□ 19
RPL17-208ENST00000580261 CFTRP13569 1480 aa12.19□□□□□ -0.46
RPL17-208ENST00000580261 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
RPL17-208ENST00000580261 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
RPL17-208ENST00000580261 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
RPL17-208ENST00000580261 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
RPL17-208ENST00000580261 EEA1Q15075 1411 aa12.11□□□□□ -0.47
RPL17-208ENST00000580261 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
RPL17-208ENST00000580261 SOGA1O94964 1423 aa12.09□□□□□ -0.47
RPL17-208ENST00000580261 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
RPL17-208ENST00000580261 POLA2Q14181 598 aa12.07□□□□□ -0.48
RPL17-208ENST00000580261 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
RPL17-208ENST00000580261 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
RPL17-208ENST00000580261 ZBTB22O15209 634 aa12.05□□□□□ -0.48
RPL17-208ENST00000580261 CUX1P39880 1505 aa12.04□□□□□ -0.48
RPL17-208ENST00000580261 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.48
RPL17-208ENST00000580261 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
RPL17-208ENST00000580261 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
RPL17-208ENST00000580261 POTEHQ6S545 545 aa11.96□□□□□ -0.49
RPL17-208ENST00000580261 NESP48681 1621 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms