RNA–Protein interactions for RNA: ENST00000579248.5

RPL17-204, Transcript of ribosomal protein L17, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPL17, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-204ENST00000579248 NISCHQ9Y2I1 1504 aa47.5■■■■■ 5.19
RPL17-204ENST00000579248 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
RPL17-204ENST00000579248 ABCC9O60706 1549 aa40.1■■■■■ 4.01
RPL17-204ENST00000579248 ZCCHC6Q5VYS8 1495 aaKnown RBP39.72■■■■□ 3.95
RPL17-204ENST00000579248 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
RPL17-204ENST00000579248 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
RPL17-204ENST00000579248 NACADO15069 1562 aa39.25■■■■□ 3.87
RPL17-204ENST00000579248 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
RPL17-204ENST00000579248 RB1CC1Q8TDY2 1594 aa39.07■■■■□ 3.84
RPL17-204ENST00000579248 SCRIBQ14160 1630 aa38.18■■■■□ 3.7
RPL17-204ENST00000579248 UNC13AQ9UPW8 1703 aa38.13■■■■□ 3.69
RPL17-204ENST00000579248 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
RPL17-204ENST00000579248 BICRAQ9NZM4 1560 aa37.79■■■■□ 3.64
RPL17-204ENST00000579248 PABPN1Q86U42 306 aaKnown RBP eCLIP37.59■■■■□ 3.61
RPL17-204ENST00000579248 CECR2Q9BXF3 1484 aa36.82■■■■□ 3.48
RPL17-204ENST00000579248 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
RPL17-204ENST00000579248 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
RPL17-204ENST00000579248 SMARCA4P51532 1647 aa36.67■■■■□ 3.46
RPL17-204ENST00000579248 MROH2BQ7Z745 1585 aa36.56■■■■□ 3.44
RPL17-204ENST00000579248 RSF1Q96T23 1441 aaPredicted RBP36.46■■■■□ 3.43
RPL17-204ENST00000579248 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
RPL17-204ENST00000579248 PEG3Q9GZU2 1588 aa36.37■■■■□ 3.41
RPL17-204ENST00000579248 SMARCA2P51531 1590 aa36.32■■■■□ 3.41
RPL17-204ENST00000579248 ATAD2BQ9ULI0 1458 aa36.26■■■■□ 3.4
RPL17-204ENST00000579248 WIZO95785 1651 aa36.2■■■■□ 3.39
RPL17-204ENST00000579248 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
RPL17-204ENST00000579248 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
RPL17-204ENST00000579248 DNAJC5BQ9UF47 199 aa36.06■■■■□ 3.36
RPL17-204ENST00000579248 SUPT5HO00267 1087 aaKnown RBP36.04■■■■□ 3.36
RPL17-204ENST00000579248 BAZ1BQ9UIG0 1483 aaKnown RBP36.01■■■■□ 3.36
RPL17-204ENST00000579248 TOP2AP11388 1531 aaKnown RBP35.92■■■■□ 3.34
RPL17-204ENST00000579248 CCDC88BA6NC98 1476 aa35.47■■■■□ 3.27
RPL17-204ENST00000579248 CADPSQ9ULU8 1353 aa35.15■■■■□ 3.22
RPL17-204ENST00000579248 CFTRP13569 1480 aa35.11■■■■□ 3.21
RPL17-204ENST00000579248 LAMC3Q9Y6N6 1575 aa35.11■■■■□ 3.21
RPL17-204ENST00000579248 PRDM2Q13029 1718 aa34.95■■■■□ 3.18
RPL17-204ENST00000579248 NESP48681 1621 aa34.93■■■■□ 3.18
RPL17-204ENST00000579248 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
RPL17-204ENST00000579248 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
RPL17-204ENST00000579248 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
RPL17-204ENST00000579248 KIF21AQ7Z4S6 1674 aa34.6■■■■□ 3.13
RPL17-204ENST00000579248 ERCC6Q03468 1493 aa34.56■■■■□ 3.12
RPL17-204ENST00000579248 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
RPL17-204ENST00000579248 MRC2Q9UBG0 1479 aa34.39■■■■□ 3.1
RPL17-204ENST00000579248 WRNQ14191 1432 aaPredicted RBP eCLIP34.37■■■■□ 3.095e-6■■■■■ 29.2
RPL17-204ENST00000579248 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
RPL17-204ENST00000579248 THOC2Q8NI27 1593 aaKnown RBP34.29■■■■□ 3.08
RPL17-204ENST00000579248 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
RPL17-204ENST00000579248 WDR62O43379 1518 aa34.25■■■■□ 3.07
RPL17-204ENST00000579248 CUX1P39880 1505 aa34.25■■■■□ 3.07
RPL17-204ENST00000579248 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
RPL17-204ENST00000579248 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
RPL17-204ENST00000579248 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
RPL17-204ENST00000579248 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
RPL17-204ENST00000579248 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
RPL17-204ENST00000579248 TRIM41Q8WV44 630 aa34.1■■■■□ 3.05
RPL17-204ENST00000579248 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.04
RPL17-204ENST00000579248 POLA1P09884 1462 aaPredicted RBP34■■■■□ 3.03
RPL17-204ENST00000579248 CUX2O14529 1486 aa33.99■■■■□ 3.03
RPL17-204ENST00000579248 SOGA1O94964 1423 aa33.9■■■■□ 3.02
RPL17-204ENST00000579248 IFT140Q96RY7 1462 aa33.87■■■■□ 3.01
RPL17-204ENST00000579248 TARBP1Q13395 1621 aaKnown RBP33.82■■■■□ 3.01
RPL17-204ENST00000579248 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
RPL17-204ENST00000579248 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
RPL17-204ENST00000579248 WDR97A6NE52 1622 aa33.74■■■□□ 2.99
RPL17-204ENST00000579248 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
RPL17-204ENST00000579248 EEA1Q15075 1411 aa33.58■■■□□ 2.97
RPL17-204ENST00000579248 ABCA5Q8WWZ7 1642 aa33.56■■■□□ 2.96
RPL17-204ENST00000579248 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
RPL17-204ENST00000579248 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
RPL17-204ENST00000579248 GAPVD1Q14C86 1478 aa33.52■■■□□ 2.96
RPL17-204ENST00000579248 EIF4G3O43432 1585 aaKnown RBP33.49■■■□□ 2.95
RPL17-204ENST00000579248 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.954e-7■■■■■ 31.3
RPL17-204ENST00000579248 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
RPL17-204ENST00000579248 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
RPL17-204ENST00000579248 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
RPL17-204ENST00000579248 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
RPL17-204ENST00000579248 IGF1RP08069 1367 aa33.36■■■□□ 2.93
RPL17-204ENST00000579248 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
RPL17-204ENST00000579248 CUL7Q14999 1698 aa33.28■■■□□ 2.92
RPL17-204ENST00000579248 MAGI1Q96QZ7 1491 aaPredicted RBP33.27■■■□□ 2.92
RPL17-204ENST00000579248 FAM9AQ8IZU1 332 aaPredicted RBP33.24■■■□□ 2.91
RPL17-204ENST00000579248 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
RPL17-204ENST00000579248 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
RPL17-204ENST00000579248 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
RPL17-204ENST00000579248 PRXQ9BXM0 1461 aa33.16■■■□□ 2.9
RPL17-204ENST00000579248 ADAMTS12P58397 1594 aa33.16■■■□□ 2.9
RPL17-204ENST00000579248 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
RPL17-204ENST00000579248 KIF21BO75037 1637 aa33.1■■■□□ 2.89
RPL17-204ENST00000579248 RAPGEF2Q9Y4G8 1499 aa33.09■■■□□ 2.89
RPL17-204ENST00000579248 CHMP7Q8WUX9 453 aaPredicted RBP33.02■■■□□ 2.88
RPL17-204ENST00000579248 GRIN2AQ12879 1464 aa32.97■■■□□ 2.87
RPL17-204ENST00000579248 GOLGA3Q08378 1498 aa32.95■■■□□ 2.87
RPL17-204ENST00000579248 CHD1O14646 1710 aa32.92■■■□□ 2.86
RPL17-204ENST00000579248 FBLN2P98095 1184 aa32.91■■■□□ 2.86
RPL17-204ENST00000579248 NUP160Q12769 1436 aa32.81■■■□□ 2.84
RPL17-204ENST00000579248 UBTFP17480 764 aaKnown RBP32.75■■■□□ 2.83
RPL17-204ENST00000579248 CEP170Q5SW79 1584 aa32.74■■■□□ 2.83
RPL17-204ENST00000579248 CTTNBP2Q8WZ74 1663 aa32.73■■■□□ 2.83
RPL17-204ENST00000579248 KIAA0586Q9BVV6 1533 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms