RNA–Protein interactions for RNA: ENST00000485649.3

SLC19A1-209, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SLC19A1, Length 1,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-209ENST00000485649 NISCHQ9Y2I1 1504 aa48.95■■■■■ 5.43
SLC19A1-209ENST00000485649 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
SLC19A1-209ENST00000485649 ZCCHC6Q5VYS8 1495 aaKnown RBP41.16■■■■■ 4.18
SLC19A1-209ENST00000485649 DCAF1Q9Y4B6 1507 aa40.48■■■■■ 4.07
SLC19A1-209ENST00000485649 DCAF8L2P0C7V8 631 aa40.39■■■■■ 4.06
SLC19A1-209ENST00000485649 SHROOM4Q9ULL8 1493 aa40.13■■■■■ 4.01
SLC19A1-209ENST00000485649 ABCC9O60706 1549 aa39.95■■■■□ 3.99
SLC19A1-209ENST00000485649 MYO15BQ96JP2 1530 aa39.92■■■■□ 3.98
SLC19A1-209ENST00000485649 NACADO15069 1562 aa39.53■■■■□ 3.92
SLC19A1-209ENST00000485649 RB1CC1Q8TDY2 1594 aa39.08■■■■□ 3.85
SLC19A1-209ENST00000485649 SCRIBQ14160 1630 aa39.07■■■■□ 3.85
SLC19A1-209ENST00000485649 SUPT5HO00267 1087 aaKnown RBP38.81■■■■□ 3.8
SLC19A1-209ENST00000485649 UNC13AQ9UPW8 1703 aa38.16■■■■□ 3.7
SLC19A1-209ENST00000485649 RSF1Q96T23 1441 aaPredicted RBP38.14■■■■□ 3.7
SLC19A1-209ENST00000485649 CECR2Q9BXF3 1484 aa38.04■■■■□ 3.68
SLC19A1-209ENST00000485649 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
SLC19A1-209ENST00000485649 MROH2BQ7Z745 1585 aa37.82■■■■□ 3.65
SLC19A1-209ENST00000485649 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
SLC19A1-209ENST00000485649 BAZ1AQ9NRL2 1556 aaPredicted RBP37.75■■■■□ 3.63
SLC19A1-209ENST00000485649 SMARCA4P51532 1647 aa37.5■■■■□ 3.59
SLC19A1-209ENST00000485649 WIZO95785 1651 aa37.45■■■■□ 3.59
SLC19A1-209ENST00000485649 CHIC1Q5VXU3 224 aa37.35■■■■□ 3.57
SLC19A1-209ENST00000485649 TOP2AP11388 1531 aaKnown RBP37.11■■■■□ 3.53
SLC19A1-209ENST00000485649 PEG3Q9GZU2 1588 aa37.08■■■■□ 3.53
SLC19A1-209ENST00000485649 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
SLC19A1-209ENST00000485649 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
SLC19A1-209ENST00000485649 CCDC88BA6NC98 1476 aa36.81■■■■□ 3.48
SLC19A1-209ENST00000485649 EIF4G1Q04637 1599 aaKnown RBP36.76■■■■□ 3.47
SLC19A1-209ENST00000485649 BAZ1BQ9UIG0 1483 aaKnown RBP36.67■■■■□ 3.46
SLC19A1-209ENST00000485649 NCAPD3P42695 1498 aa36.57■■■■□ 3.44
SLC19A1-209ENST00000485649 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
SLC19A1-209ENST00000485649 HMGXB3Q12766 1538 aa36.45■■■■□ 3.43
SLC19A1-209ENST00000485649 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
SLC19A1-209ENST00000485649 ABCC8Q09428 1581 aa36.05■■■■□ 3.36
SLC19A1-209ENST00000485649 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
SLC19A1-209ENST00000485649 WRNQ14191 1432 aaPredicted RBP eCLIP35.86■■■■□ 3.33
SLC19A1-209ENST00000485649 CFTRP13569 1480 aa35.82■■■■□ 3.32
SLC19A1-209ENST00000485649 FAM9AQ8IZU1 332 aaPredicted RBP35.8■■■■□ 3.32
SLC19A1-209ENST00000485649 CADPSQ9ULU8 1353 aa35.65■■■■□ 3.3
SLC19A1-209ENST00000485649 SYNJ1O43426 1573 aa35.63■■■■□ 3.29
SLC19A1-209ENST00000485649 SOGA1O94964 1423 aa35.53■■■■□ 3.28
SLC19A1-209ENST00000485649 EEA1Q15075 1411 aa35.51■■■■□ 3.28
SLC19A1-209ENST00000485649 TOP2BQ02880 1626 aa35.46■■■■□ 3.27
SLC19A1-209ENST00000485649 PRDM2Q13029 1718 aa35.38■■■■□ 3.25
SLC19A1-209ENST00000485649 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
SLC19A1-209ENST00000485649 CSRNP3Q8WYN3 585 aa35.35■■■■□ 3.25
SLC19A1-209ENST00000485649 RUSC2Q8N2Y8 1516 aa35.35■■■■□ 3.25
SLC19A1-209ENST00000485649 CUX1P39880 1505 aa35.33■■■■□ 3.25
SLC19A1-209ENST00000485649 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
SLC19A1-209ENST00000485649 EHMT2Q96KQ7 1210 aa35.24■■■■□ 3.23
SLC19A1-209ENST00000485649 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
SLC19A1-209ENST00000485649 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
SLC19A1-209ENST00000485649 NESP48681 1621 aa35.17■■■■□ 3.22
SLC19A1-209ENST00000485649 TNIKQ9UKE5 1360 aa35.01■■■■□ 3.19
SLC19A1-209ENST00000485649 GOLGA3Q08378 1498 aa35■■■■□ 3.19
SLC19A1-209ENST00000485649 CEP164Q9UPV0 1460 aa34.99■■■■□ 3.19
SLC19A1-209ENST00000485649 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
SLC19A1-209ENST00000485649 KIF21BO75037 1637 aa34.95■■■■□ 3.18
SLC19A1-209ENST00000485649 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
SLC19A1-209ENST00000485649 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
SLC19A1-209ENST00000485649 DNMBPQ6XZF7 1577 aa34.89■■■■□ 3.18
SLC19A1-209ENST00000485649 UBTFP17480 764 aaKnown RBP34.88■■■■□ 3.17
SLC19A1-209ENST00000485649 TOPBP1Q92547 1522 aa34.84■■■■□ 3.17
SLC19A1-209ENST00000485649 CEP162Q5TB80 1403 aa34.8■■■■□ 3.16
SLC19A1-209ENST00000485649 PRXQ9BXM0 1461 aa34.79■■■■□ 3.16
SLC19A1-209ENST00000485649 RAPGEF2Q9Y4G8 1499 aa34.77■■■■□ 3.16
SLC19A1-209ENST00000485649 CUX2O14529 1486 aa34.74■■■■□ 3.15
SLC19A1-209ENST00000485649 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
SLC19A1-209ENST00000485649 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
SLC19A1-209ENST00000485649 ERICH3Q5RHP9 1530 aa34.7■■■■□ 3.14
SLC19A1-209ENST00000485649 IGF1RP08069 1367 aa34.65■■■■□ 3.14
SLC19A1-209ENST00000485649 ABCA10Q8WWZ4 1543 aa34.63■■■■□ 3.13
SLC19A1-209ENST00000485649 KIF21AQ7Z4S6 1674 aa34.61■■■■□ 3.13
SLC19A1-209ENST00000485649 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
SLC19A1-209ENST00000485649 PCGF6Q9BYE7 350 aa34.56■■■■□ 3.12
SLC19A1-209ENST00000485649 TRIM26Q12899 539 aaPredicted RBP34.53■■■■□ 3.12
SLC19A1-209ENST00000485649 CLIP1P30622 1438 aa34.47■■■■□ 3.11
SLC19A1-209ENST00000485649 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
SLC19A1-209ENST00000485649 CARMIL1Q5VZK9 1371 aa34.45■■■■□ 3.11
SLC19A1-209ENST00000485649 WDR97A6NE52 1622 aa34.34■■■■□ 3.09
SLC19A1-209ENST00000485649 TDRD9Q8NDG6 1382 aaKnown RBP34.28■■■■□ 3.08
SLC19A1-209ENST00000485649 TARBP1Q13395 1621 aaKnown RBP34.27■■■■□ 3.08
SLC19A1-209ENST00000485649 WDR62O43379 1518 aa34.25■■■■□ 3.07
SLC19A1-209ENST00000485649 ABCA5Q8WWZ7 1642 aa34.24■■■■□ 3.07
SLC19A1-209ENST00000485649 GAPVD1Q14C86 1478 aa34.23■■■■□ 3.07
SLC19A1-209ENST00000485649 VPS8Q8N3P4 1428 aa34.21■■■■□ 3.07
SLC19A1-209ENST00000485649 ERCC6Q03468 1493 aa34.2■■■■□ 3.07
SLC19A1-209ENST00000485649 RANGAP1P46060 587 aaPredicted RBP34.18■■■■□ 3.06
SLC19A1-209ENST00000485649 CUL7Q14999 1698 aa34.18■■■■□ 3.06
SLC19A1-209ENST00000485649 PPARGC1BQ86YN6 1023 aaKnown RBP34.16■■■■□ 3.06
SLC19A1-209ENST00000485649 IFT140Q96RY7 1462 aa34.11■■■■□ 3.05
SLC19A1-209ENST00000485649 ARAP1Q96P48 1450 aa34.07■■■■□ 3.04
SLC19A1-209ENST00000485649 ARHGAP35Q9NRY4 1499 aa34.03■■■■□ 3.04
SLC19A1-209ENST00000485649 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
SLC19A1-209ENST00000485649 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.038e-9■■■■■ 38.8
SLC19A1-209ENST00000485649 GRIN2BQ13224 1484 aa33.93■■■■□ 3.02
SLC19A1-209ENST00000485649 ZNF608Q9ULD9 1512 aaPredicted RBP33.91■■■■□ 3.02
SLC19A1-209ENST00000485649 APLP2Q06481 763 aa33.9■■■■□ 3.02
SLC19A1-209ENST00000485649 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
SLC19A1-209ENST00000485649 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms