RNA–Protein interactions for RNA: ENST00000583637.5

RPL17-218, Transcript of ribosomal protein L17, humanhuman

TSL 3

Gene RPL17, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-218ENST00000583637 NISCHQ9Y2I1 1504 aa46.63■■■■■ 5.05
RPL17-218ENST00000583637 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
RPL17-218ENST00000583637 ABCC9O60706 1549 aa40.51■■■■■ 4.08
RPL17-218ENST00000583637 RB1CC1Q8TDY2 1594 aa39.07■■■■□ 3.84
RPL17-218ENST00000583637 NACADO15069 1562 aa39■■■■□ 3.83
RPL17-218ENST00000583637 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
RPL17-218ENST00000583637 DCAF8L2P0C7V8 631 aa38.84■■■■□ 3.81
RPL17-218ENST00000583637 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.8
RPL17-218ENST00000583637 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
RPL17-218ENST00000583637 UNC13AQ9UPW8 1703 aa38.26■■■■□ 3.71
RPL17-218ENST00000583637 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
RPL17-218ENST00000583637 BICRAQ9NZM4 1560 aa37.82■■■■□ 3.65
RPL17-218ENST00000583637 PABPN1Q86U42 306 aaKnown RBP eCLIP37.76■■■■□ 3.64
RPL17-218ENST00000583637 SHROOM4Q9ULL8 1493 aa37.51■■■■□ 3.59
RPL17-218ENST00000583637 DNAJC5BQ9UF47 199 aa36.98■■■■□ 3.51
RPL17-218ENST00000583637 EIF4G1Q04637 1599 aaKnown RBP36.86■■■■□ 3.49
RPL17-218ENST00000583637 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
RPL17-218ENST00000583637 CECR2Q9BXF3 1484 aa36.4■■■■□ 3.42
RPL17-218ENST00000583637 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
RPL17-218ENST00000583637 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
RPL17-218ENST00000583637 SMARCA2P51531 1590 aa35.99■■■■□ 3.35
RPL17-218ENST00000583637 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
RPL17-218ENST00000583637 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
RPL17-218ENST00000583637 NCAPD3P42695 1498 aa35.91■■■■□ 3.34
RPL17-218ENST00000583637 PEG3Q9GZU2 1588 aa35.87■■■■□ 3.33
RPL17-218ENST00000583637 HMGXB3Q12766 1538 aa35.84■■■■□ 3.33
RPL17-218ENST00000583637 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
RPL17-218ENST00000583637 WIZO95785 1651 aa35.59■■■■□ 3.29
RPL17-218ENST00000583637 RSF1Q96T23 1441 aaPredicted RBP35.49■■■■□ 3.27
RPL17-218ENST00000583637 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
RPL17-218ENST00000583637 LAMC3Q9Y6N6 1575 aa35.06■■■■□ 3.2
RPL17-218ENST00000583637 NESP48681 1621 aa35.05■■■■□ 3.2
RPL17-218ENST00000583637 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
RPL17-218ENST00000583637 CADPSQ9ULU8 1353 aa34.86■■■■□ 3.17
RPL17-218ENST00000583637 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
RPL17-218ENST00000583637 PDS5BQ9NTI5 1447 aa34.75■■■■□ 3.15
RPL17-218ENST00000583637 CCDC88BA6NC98 1476 aa34.72■■■■□ 3.15
RPL17-218ENST00000583637 CFTRP13569 1480 aa34.68■■■■□ 3.14
RPL17-218ENST00000583637 PRDM2Q13029 1718 aa34.66■■■■□ 3.14
RPL17-218ENST00000583637 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
RPL17-218ENST00000583637 CUX2O14529 1486 aa34.58■■■■□ 3.13
RPL17-218ENST00000583637 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
RPL17-218ENST00000583637 FANCD2Q9BXW9 1451 aa34.51■■■■□ 3.11
RPL17-218ENST00000583637 CEP164Q9UPV0 1460 aa34.5■■■■□ 3.11
RPL17-218ENST00000583637 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
RPL17-218ENST00000583637 WDR62O43379 1518 aa34.34■■■■□ 3.09
RPL17-218ENST00000583637 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
RPL17-218ENST00000583637 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
RPL17-218ENST00000583637 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
RPL17-218ENST00000583637 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
RPL17-218ENST00000583637 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
RPL17-218ENST00000583637 CUX1P39880 1505 aa33.72■■■□□ 2.99
RPL17-218ENST00000583637 POLA1P09884 1462 aaPredicted RBP33.68■■■□□ 2.98
RPL17-218ENST00000583637 TARBP1Q13395 1621 aaKnown RBP33.62■■■□□ 2.97
RPL17-218ENST00000583637 FGD5Q6ZNL6 1462 aa33.61■■■□□ 2.97
RPL17-218ENST00000583637 ZNF608Q9ULD9 1512 aaPredicted RBP33.55■■■□□ 2.96
RPL17-218ENST00000583637 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
RPL17-218ENST00000583637 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
RPL17-218ENST00000583637 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.955e-6■■■■■ 29.2
RPL17-218ENST00000583637 SOGA1O94964 1423 aa33.49■■■□□ 2.95
RPL17-218ENST00000583637 TOP2BQ02880 1626 aa33.49■■■□□ 2.95
RPL17-218ENST00000583637 RAD54L2Q9Y4B4 1467 aa33.49■■■□□ 2.95
RPL17-218ENST00000583637 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
RPL17-218ENST00000583637 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
RPL17-218ENST00000583637 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.935e-7■■■■□ 21.4
RPL17-218ENST00000583637 DNAJC5Q9H3Z4 198 aa33.33■■■□□ 2.93
RPL17-218ENST00000583637 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
RPL17-218ENST00000583637 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
RPL17-218ENST00000583637 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
RPL17-218ENST00000583637 ABCA5Q8WWZ7 1642 aa33.21■■■□□ 2.91
RPL17-218ENST00000583637 CHD1O14646 1710 aa33.15■■■□□ 2.9
RPL17-218ENST00000583637 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
RPL17-218ENST00000583637 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
RPL17-218ENST00000583637 SNAPC4Q5SXM2 1469 aa33.12■■■□□ 2.89
RPL17-218ENST00000583637 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
RPL17-218ENST00000583637 OSCARQ8IYS5 282 aa33.04■■■□□ 2.88
RPL17-218ENST00000583637 SYNJ2O15056 1496 aa32.94■■■□□ 2.86
RPL17-218ENST00000583637 FBLN2P98095 1184 aa32.93■■■□□ 2.86
RPL17-218ENST00000583637 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
RPL17-218ENST00000583637 ADAMTS12P58397 1594 aa32.9■■■□□ 2.86
RPL17-218ENST00000583637 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
RPL17-218ENST00000583637 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
RPL17-218ENST00000583637 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
RPL17-218ENST00000583637 GRIN2AQ12879 1464 aa32.73■■■□□ 2.83
RPL17-218ENST00000583637 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
RPL17-218ENST00000583637 CUL7Q14999 1698 aa32.7■■■□□ 2.83
RPL17-218ENST00000583637 TRIM41Q8WV44 630 aa32.66■■■□□ 2.82
RPL17-218ENST00000583637 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
RPL17-218ENST00000583637 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
RPL17-218ENST00000583637 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
RPL17-218ENST00000583637 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
RPL17-218ENST00000583637 CEP170Q5SW79 1584 aa32.59■■■□□ 2.81
RPL17-218ENST00000583637 IGF1RP08069 1367 aa32.58■■■□□ 2.81
RPL17-218ENST00000583637 NUP160Q12769 1436 aa32.56■■■□□ 2.8
RPL17-218ENST00000583637 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.78
RPL17-218ENST00000583637 CARMIL1Q5VZK9 1371 aa32.43■■■□□ 2.78
RPL17-218ENST00000583637 SHROOM2Q13796 1616 aa32.38■■■□□ 2.77
RPL17-218ENST00000583637 ARAP1Q96P48 1450 aa32.34■■■□□ 2.77
RPL17-218ENST00000583637 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
RPL17-218ENST00000583637 KIAA0586Q9BVV6 1533 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms