RNA–Protein interactions for RNA: ENST00000491876.5

C4A-257, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 880 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-257ENST00000491876 NISCHQ9Y2I1 1504 aa49.8■■■■■ 5.56
C4A-257ENST00000491876 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
C4A-257ENST00000491876 ABCC9O60706 1549 aa44.2■■■■■ 4.67
C4A-257ENST00000491876 RB1CC1Q8TDY2 1594 aa42.17■■■■■ 4.34
C4A-257ENST00000491876 DCAF8L2P0C7V8 631 aa41.96■■■■■ 4.31
C4A-257ENST00000491876 NACADO15069 1562 aa41.95■■■■■ 4.31
C4A-257ENST00000491876 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.22
C4A-257ENST00000491876 UNC13AQ9UPW8 1703 aa41.35■■■■■ 4.21
C4A-257ENST00000491876 ZCCHC6Q5VYS8 1495 aaKnown RBP41.34■■■■■ 4.21
C4A-257ENST00000491876 PABPN1Q86U42 306 aaKnown RBP eCLIP41.24■■■■■ 4.19
C4A-257ENST00000491876 DNAJC5BQ9UF47 199 aa41.14■■■■■ 4.18
C4A-257ENST00000491876 DCAF1Q9Y4B6 1507 aa41.08■■■■■ 4.17
C4A-257ENST00000491876 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
C4A-257ENST00000491876 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
C4A-257ENST00000491876 SHROOM4Q9ULL8 1493 aa40.3■■■■■ 4.04
C4A-257ENST00000491876 CC2D2AQ9P2K1 1620 aa39.94■■■■□ 3.98
C4A-257ENST00000491876 EIF4G1Q04637 1599 aaKnown RBP39.92■■■■□ 3.98
C4A-257ENST00000491876 CECR2Q9BXF3 1484 aa39.73■■■■□ 3.95
C4A-257ENST00000491876 SMARCA4P51532 1647 aa38.79■■■■□ 3.8
C4A-257ENST00000491876 NCAPD3P42695 1498 aa38.72■■■■□ 3.79
C4A-257ENST00000491876 ATAD2BQ9ULI0 1458 aa38.7■■■■□ 3.79
C4A-257ENST00000491876 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
C4A-257ENST00000491876 SMARCA2P51531 1590 aa38.58■■■■□ 3.77
C4A-257ENST00000491876 HMGXB3Q12766 1538 aa38.48■■■■□ 3.75
C4A-257ENST00000491876 MROH2BQ7Z745 1585 aa38.43■■■■□ 3.74
C4A-257ENST00000491876 BAZ1BQ9UIG0 1483 aaKnown RBP38.35■■■■□ 3.73
C4A-257ENST00000491876 PEG3Q9GZU2 1588 aa38.34■■■■□ 3.73
C4A-257ENST00000491876 NESP48681 1621 aa38.11■■■■□ 3.69
C4A-257ENST00000491876 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
C4A-257ENST00000491876 WIZO95785 1651 aa38.03■■■■□ 3.68
C4A-257ENST00000491876 CUX2O14529 1486 aa37.83■■■■□ 3.65
C4A-257ENST00000491876 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
C4A-257ENST00000491876 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
C4A-257ENST00000491876 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
C4A-257ENST00000491876 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
C4A-257ENST00000491876 CADPSQ9ULU8 1353 aa37.58■■■■□ 3.61
C4A-257ENST00000491876 PDS5BQ9NTI5 1447 aa37.55■■■■□ 3.6
C4A-257ENST00000491876 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
C4A-257ENST00000491876 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
C4A-257ENST00000491876 MRC2Q9UBG0 1479 aa37.24■■■■□ 3.55
C4A-257ENST00000491876 CFTRP13569 1480 aa37.23■■■■□ 3.55
C4A-257ENST00000491876 FANCD2Q9BXW9 1451 aa37.19■■■■□ 3.54
C4A-257ENST00000491876 CEP164Q9UPV0 1460 aa37.18■■■■□ 3.54
C4A-257ENST00000491876 WDR62O43379 1518 aa37.13■■■■□ 3.53
C4A-257ENST00000491876 CCDC88BA6NC98 1476 aa37.09■■■■□ 3.53
C4A-257ENST00000491876 PRDM2Q13029 1718 aa36.97■■■■□ 3.51
C4A-257ENST00000491876 URB2Q14146 1524 aaKnown RBP36.89■■■■□ 3.5
C4A-257ENST00000491876 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
C4A-257ENST00000491876 SUPT5HO00267 1087 aaKnown RBP36.45■■■■□ 3.43
C4A-257ENST00000491876 DNMBPQ6XZF7 1577 aa36.42■■■■□ 3.42
C4A-257ENST00000491876 ABCC8Q09428 1581 aa36.4■■■■□ 3.42
C4A-257ENST00000491876 IFT140Q96RY7 1462 aa36.39■■■■□ 3.42
C4A-257ENST00000491876 ZNF608Q9ULD9 1512 aaPredicted RBP36.38■■■■□ 3.41
C4A-257ENST00000491876 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
C4A-257ENST00000491876 TARBP1Q13395 1621 aaKnown RBP36.19■■■■□ 3.38
C4A-257ENST00000491876 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
C4A-257ENST00000491876 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
C4A-257ENST00000491876 AQRO60306 1485 aaKnown RBP eCLIP36.1■■■■□ 3.37
C4A-257ENST00000491876 RAD54L2Q9Y4B4 1467 aa36.1■■■■□ 3.37
C4A-257ENST00000491876 CUX1P39880 1505 aa36.08■■■■□ 3.37
C4A-257ENST00000491876 FGD5Q6ZNL6 1462 aa36.03■■■■□ 3.36
C4A-257ENST00000491876 SOGA1O94964 1423 aa36.02■■■■□ 3.36
C4A-257ENST00000491876 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
C4A-257ENST00000491876 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
C4A-257ENST00000491876 CHD1O14646 1710 aa35.89■■■■□ 3.34
C4A-257ENST00000491876 FBLN2P98095 1184 aa35.79■■■■□ 3.32
C4A-257ENST00000491876 WDR97A6NE52 1622 aa35.77■■■■□ 3.32
C4A-257ENST00000491876 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
C4A-257ENST00000491876 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
C4A-257ENST00000491876 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
C4A-257ENST00000491876 SNAPC4Q5SXM2 1469 aa35.73■■■■□ 3.31
C4A-257ENST00000491876 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
C4A-257ENST00000491876 GRIN2BQ13224 1484 aa35.64■■■■□ 3.3
C4A-257ENST00000491876 PBRM1Q86U86 1689 aa35.62■■■■□ 3.29
C4A-257ENST00000491876 ABCA10Q8WWZ4 1543 aa35.6■■■■□ 3.29
C4A-257ENST00000491876 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
C4A-257ENST00000491876 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
C4A-257ENST00000491876 WRNQ14191 1432 aaPredicted RBP eCLIP35.58■■■■□ 3.29
C4A-257ENST00000491876 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
C4A-257ENST00000491876 MAGI1Q96QZ7 1491 aaPredicted RBP35.58■■■■□ 3.29
C4A-257ENST00000491876 TOP2BQ02880 1626 aa35.57■■■■□ 3.28
C4A-257ENST00000491876 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
C4A-257ENST00000491876 CHMP7Q8WUX9 453 aaPredicted RBP35.54■■■■□ 3.28
C4A-257ENST00000491876 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
C4A-257ENST00000491876 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
C4A-257ENST00000491876 CYB5RLQ6IPT4 315 aa35.38■■■■□ 3.25
C4A-257ENST00000491876 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
C4A-257ENST00000491876 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
C4A-257ENST00000491876 GRIN2AQ12879 1464 aa35.2■■■■□ 3.23
C4A-257ENST00000491876 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
C4A-257ENST00000491876 FHAD1B1AJZ9 1412 aa35.13■■■■□ 3.21
C4A-257ENST00000491876 CEP170Q5SW79 1584 aa35.09■■■■□ 3.21
C4A-257ENST00000491876 NUP160Q12769 1436 aa35.05■■■■□ 3.2
C4A-257ENST00000491876 ERCC6L2Q5T890 1561 aa34.97■■■■□ 3.19
C4A-257ENST00000491876 TRHP20396 242 aaPredicted RBP34.87■■■■□ 3.17
C4A-257ENST00000491876 SHROOM2Q13796 1616 aa34.87■■■■□ 3.17
C4A-257ENST00000491876 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
C4A-257ENST00000491876 IGF1RP08069 1367 aa34.82■■■■□ 3.16
C4A-257ENST00000491876 CUL7Q14999 1698 aa34.74■■■■□ 3.15
C4A-257ENST00000491876 RUSC2Q8N2Y8 1516 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms