RNA–Protein interactions for RNA: ENST00000578966.1

RPL17-203, Transcript of ribosomal protein L17, humanhuman

TSL 1 (best)

Gene RPL17, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-203ENST00000578966 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
RPL17-203ENST00000578966 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
RPL17-203ENST00000578966 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
RPL17-203ENST00000578966 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
RPL17-203ENST00000578966 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
RPL17-203ENST00000578966 FOXD1Q16676 465 aa16.64■□□□□ 0.25
RPL17-203ENST00000578966 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
RPL17-203ENST00000578966 ADRA2BP18089 450 aa16.04■□□□□ 0.16
RPL17-203ENST00000578966 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
RPL17-203ENST00000578966 MSH5O43196 834 aa15.21■□□□□ 0.03
RPL17-203ENST00000578966 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
RPL17-203ENST00000578966 KCNA4P22459 653 aa14.57□□□□□ -0.08
RPL17-203ENST00000578966 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
RPL17-203ENST00000578966 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
RPL17-203ENST00000578966 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
RPL17-203ENST00000578966 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
RPL17-203ENST00000578966 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
RPL17-203ENST00000578966 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
RPL17-203ENST00000578966 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
RPL17-203ENST00000578966 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
RPL17-203ENST00000578966 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
RPL17-203ENST00000578966 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
RPL17-203ENST00000578966 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
RPL17-203ENST00000578966 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
RPL17-203ENST00000578966 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
RPL17-203ENST00000578966 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
RPL17-203ENST00000578966 ZBTB22O15209 634 aa13.48□□□□□ -0.25
RPL17-203ENST00000578966 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
RPL17-203ENST00000578966 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
RPL17-203ENST00000578966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPL17-203ENST00000578966 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
RPL17-203ENST00000578966 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
RPL17-203ENST00000578966 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
RPL17-203ENST00000578966 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
RPL17-203ENST00000578966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
RPL17-203ENST00000578966 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
RPL17-203ENST00000578966 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
RPL17-203ENST00000578966 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
RPL17-203ENST00000578966 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
RPL17-203ENST00000578966 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
RPL17-203ENST00000578966 APLP2Q06481 763 aa12.68□□□□□ -0.38
RPL17-203ENST00000578966 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
RPL17-203ENST00000578966 CAPN15O75808 1086 aa12.64□□□□□ -0.39
RPL17-203ENST00000578966 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
RPL17-203ENST00000578966 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
RPL17-203ENST00000578966 DSG3P32926 999 aa12.51□□□□□ -0.41
RPL17-203ENST00000578966 ABCB7O75027 752 aa12.46□□□□□ -0.41
RPL17-203ENST00000578966 POLA2Q14181 598 aa12.45□□□□□ -0.42
RPL17-203ENST00000578966 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
RPL17-203ENST00000578966 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
RPL17-203ENST00000578966 FBLN2P98095 1184 aa12.14□□□□□ -0.47
RPL17-203ENST00000578966 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
RPL17-203ENST00000578966 FKBP8Q14318 412 aa12.02□□□□□ -0.49
RPL17-203ENST00000578966 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
RPL17-203ENST00000578966 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
RPL17-203ENST00000578966 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
RPL17-203ENST00000578966 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
RPL17-203ENST00000578966 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
RPL17-203ENST00000578966 PROM2Q8N271 834 aa11.85□□□□□ -0.51
RPL17-203ENST00000578966 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
RPL17-203ENST00000578966 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
RPL17-203ENST00000578966 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPL17-203ENST00000578966 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
RPL17-203ENST00000578966 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
RPL17-203ENST00000578966 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
RPL17-203ENST00000578966 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
RPL17-203ENST00000578966 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
RPL17-203ENST00000578966 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
RPL17-203ENST00000578966 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
RPL17-203ENST00000578966 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
RPL17-203ENST00000578966 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
RPL17-203ENST00000578966 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
RPL17-203ENST00000578966 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
RPL17-203ENST00000578966 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
RPL17-203ENST00000578966 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
RPL17-203ENST00000578966 MIER1Q8N108 512 aa11.28□□□□□ -0.6
RPL17-203ENST00000578966 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
RPL17-203ENST00000578966 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
RPL17-203ENST00000578966 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
RPL17-203ENST00000578966 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
RPL17-203ENST00000578966 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
RPL17-203ENST00000578966 POTEHQ6S545 545 aa11.19□□□□□ -0.62
RPL17-203ENST00000578966 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
RPL17-203ENST00000578966 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
RPL17-203ENST00000578966 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
RPL17-203ENST00000578966 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
RPL17-203ENST00000578966 NUBP1P53384 320 aa11.09□□□□□ -0.63
RPL17-203ENST00000578966 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
RPL17-203ENST00000578966 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
RPL17-203ENST00000578966 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
RPL17-203ENST00000578966 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
RPL17-203ENST00000578966 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPL17-203ENST00000578966 PKD2Q13563 968 aa10.98□□□□□ -0.65
RPL17-203ENST00000578966 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
RPL17-203ENST00000578966 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
RPL17-203ENST00000578966 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
RPL17-203ENST00000578966 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
RPL17-203ENST00000578966 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
RPL17-203ENST00000578966 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
RPL17-203ENST00000578966 EVX2Q03828 476 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms