RNA–Protein interactions for RNA: ENST00000618613.5

RPL17-223, Transcript of ribosomal protein L17, human

APPRIS P1 TSL 3

Gene RPL17, Length 856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL17-223	ENST00000618613	NISCH	Q9Y2I1	1504 aa		42.2	■■■■■ 4.35
RPL17-223	ENST00000618613	CCDC180	Q9P1Z9	1646 aa		37.73	■■■■□ 3.63
RPL17-223	ENST00000618613	ABCC9	O60706	1549 aa		37.56	■■■■□ 3.6
RPL17-223	ENST00000618613	RB1CC1	Q8TDY2	1594 aa		35.8	■■■■□ 3.32
RPL17-223	ENST00000618613	NACAD	O15069	1562 aa		35.62	■■■■□ 3.29
RPL17-223	ENST00000618613	DCAF8L2	P0C7V8	631 aa		35.43	■■■■□ 3.26
RPL17-223	ENST00000618613	MYO15B	Q96JP2	1530 aa		35.22	■■■■□ 3.23
RPL17-223	ENST00000618613	DNAJC5B	Q9UF47	199 aa		35.13	■■■■□ 3.21
RPL17-223	ENST00000618613	UNC13A	Q9UPW8	1703 aa		35.07	■■■■□ 3.2
RPL17-223	ENST00000618613	ZCCHC6	Q5VYS8	1495 aa	Known RBP	35.03	■■■■□ 3.2
RPL17-223	ENST00000618613	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35	■■■■□ 3.19
RPL17-223	ENST00000618613	BICRA	Q9NZM4	1560 aa		34.86	■■■■□ 3.17
RPL17-223	ENST00000618613	DCAF1	Q9Y4B6	1507 aa		34.86	■■■■□ 3.17
RPL17-223	ENST00000618613	SCRIB	Q14160	1630 aa		34.41	■■■■□ 3.1
RPL17-223	ENST00000618613	SHROOM4	Q9ULL8	1493 aa		34.29	■■■■□ 3.08
RPL17-223	ENST00000618613	CC2D2A	Q9P2K1	1620 aa		33.93	■■■■□ 3.02
RPL17-223	ENST00000618613	EIF4G1	Q04637	1599 aa	Known RBP	33.92	■■■■□ 3.02
RPL17-223	ENST00000618613	CECR2	Q9BXF3	1484 aa		33.78	■■■■□ 3
RPL17-223	ENST00000618613	NCAPD3	P42695	1498 aa		32.92	■■■□□ 2.86
RPL17-223	ENST00000618613	SMARCA4	P51532	1647 aa		32.87	■■■□□ 2.85
RPL17-223	ENST00000618613	ATAD2B	Q9ULI0	1458 aa		32.86	■■■□□ 2.85
RPL17-223	ENST00000618613	SMARCA2	P51531	1590 aa		32.72	■■■□□ 2.83
RPL17-223	ENST00000618613	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.7	■■■□□ 2.82
RPL17-223	ENST00000618613	HMGXB3	Q12766	1538 aa		32.67	■■■□□ 2.82
RPL17-223	ENST00000618613	PEG3	Q9GZU2	1588 aa		32.56	■■■□□ 2.8
RPL17-223	ENST00000618613	MROH2B	Q7Z745	1585 aa		32.55	■■■□□ 2.8
RPL17-223	ENST00000618613	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.49	■■■□□ 2.79
RPL17-223	ENST00000618613	NES	P48681	1621 aa		32.37	■■■□□ 2.77
RPL17-223	ENST00000618613	ERCC6	Q03468	1493 aa		32.33	■■■□□ 2.77
RPL17-223	ENST00000618613	CUX2	O14529	1486 aa		32.24	■■■□□ 2.75
RPL17-223	ENST00000618613	WIZ	O95785	1651 aa		32.15	■■■□□ 2.74
RPL17-223	ENST00000618613	LAMC3	Q9Y6N6	1575 aa		32.11	■■■□□ 2.73
RPL17-223	ENST00000618613	DNAJC5	Q9H3Z4	198 aa		32.01	■■■□□ 2.71
RPL17-223	ENST00000618613	THOC2	Q8NI27	1593 aa	Known RBP	31.98	■■■□□ 2.71
RPL17-223	ENST00000618613	RSF1	Q96T23	1441 aa	Predicted RBP	31.94	■■■□□ 2.7
RPL17-223	ENST00000618613	KIF21A	Q7Z4S6	1674 aa		31.92	■■■□□ 2.7
RPL17-223	ENST00000618613	CADPS	Q9ULU8	1353 aa		31.91	■■■□□ 2.7
RPL17-223	ENST00000618613	PDS5B	Q9NTI5	1447 aa		31.88	■■■□□ 2.69
RPL17-223	ENST00000618613	TOP2A	P11388	1531 aa	Known RBP	31.73	■■■□□ 2.67
RPL17-223	ENST00000618613	MRC2	Q9UBG0	1479 aa		31.63	■■■□□ 2.65
RPL17-223	ENST00000618613	CFTR	P13569	1480 aa		31.6	■■■□□ 2.65
RPL17-223	ENST00000618613	WDR62	O43379	1518 aa		31.56	■■■□□ 2.64
RPL17-223	ENST00000618613	FANCD2	Q9BXW9	1451 aa		31.54	■■■□□ 2.64
RPL17-223	ENST00000618613	CEP164	Q9UPV0	1460 aa		31.53	■■■□□ 2.64
RPL17-223	ENST00000618613	CCDC88B	A6NC98	1476 aa		31.4	■■■□□ 2.62
RPL17-223	ENST00000618613	URB2	Q14146	1524 aa	Known RBP	31.32	■■■□□ 2.6
RPL17-223	ENST00000618613	PRDM2	Q13029	1718 aa		31.28	■■■□□ 2.6
RPL17-223	ENST00000618613	TOPBP1	Q92547	1522 aa		30.99	■■■□□ 2.55
RPL17-223	ENST00000618613	IFT140	Q96RY7	1462 aa		30.9	■■■□□ 2.54
RPL17-223	ENST00000618613	ZNF608	Q9ULD9	1512 aa	Predicted RBP	30.89	■■■□□ 2.54
RPL17-223	ENST00000618613	DNMBP	Q6XZF7	1577 aa		30.88	■■■□□ 2.53
RPL17-223	ENST00000618613	ABCC8	Q09428	1581 aa		30.86	■■■□□ 2.53
RPL17-223	ENST00000618613	OSCAR	Q8IYS5	282 aa		30.78	■■■□□ 2.52
RPL17-223	ENST00000618613	TARBP1	Q13395	1621 aa	Known RBP	30.73	■■■□□ 2.51
RPL17-223	ENST00000618613	EIF4G3	O43432	1585 aa	Known RBP	30.7	■■■□□ 2.5
RPL17-223	ENST00000618613	POLA1	P09884	1462 aa	Predicted RBP	30.69	■■■□□ 2.5
RPL17-223	ENST00000618613	TRIM41	Q8WV44	630 aa		30.65	■■■□□ 2.5
RPL17-223	ENST00000618613	SUPT5H	O00267	1087 aa	Known RBP	30.62	■■■□□ 2.49
RPL17-223	ENST00000618613	AQR	O60306	1485 aa	Known RBP eCLIP	30.62	■■■□□ 2.49	5e-7	■■■■□ 21.4
RPL17-223	ENST00000618613	RAD54L2	Q9Y4B4	1467 aa		30.59	■■■□□ 2.49
RPL17-223	ENST00000618613	CUX1	P39880	1505 aa		30.57	■■■□□ 2.48
RPL17-223	ENST00000618613	FGD5	Q6ZNL6	1462 aa		30.52	■■■□□ 2.48
RPL17-223	ENST00000618613	SOGA1	O94964	1423 aa		30.52	■■■□□ 2.48
RPL17-223	ENST00000618613	TDRD9	Q8NDG6	1382 aa	Known RBP	30.46	■■■□□ 2.47
RPL17-223	ENST00000618613	CHD1	O14646	1710 aa		30.44	■■■□□ 2.46
RPL17-223	ENST00000618613	RIMBP3C	A6NJZ7	1639 aa		30.42	■■■□□ 2.46
RPL17-223	ENST00000618613	RIMBP3B	A6NNM3	1639 aa		30.42	■■■□□ 2.46
RPL17-223	ENST00000618613	RIMBP3	Q9UFD9	1639 aa		30.42	■■■□□ 2.46
RPL17-223	ENST00000618613	ARHGEF11	O15085	1522 aa		30.35	■■■□□ 2.45
RPL17-223	ENST00000618613	WDR97	A6NE52	1622 aa		30.34	■■■□□ 2.45
RPL17-223	ENST00000618613	SNAPC4	Q5SXM2	1469 aa		30.3	■■■□□ 2.44
RPL17-223	ENST00000618613	FBLN2	P98095	1184 aa		30.29	■■■□□ 2.44
RPL17-223	ENST00000618613	GRIN2B	Q13224	1484 aa		30.23	■■■□□ 2.43
RPL17-223	ENST00000618613	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.19	■■■□□ 2.42
RPL17-223	ENST00000618613	ABCA10	Q8WWZ4	1543 aa		30.18	■■■□□ 2.42
RPL17-223	ENST00000618613	GAPVD1	Q14C86	1478 aa		30.16	■■■□□ 2.42
RPL17-223	ENST00000618613	PBRM1	Q86U86	1689 aa		30.14	■■■□□ 2.42
RPL17-223	ENST00000618613	ABCA5	Q8WWZ7	1642 aa		30.13	■■■□□ 2.41
RPL17-223	ENST00000618613	CLASP1	Q7Z460	1538 aa		30.12	■■■□□ 2.41
RPL17-223	ENST00000618613	SYNJ2	O15056	1496 aa		30.11	■■■□□ 2.41
RPL17-223	ENST00000618613	BIVM-ERCC5	R4GMW8	1640 aa		30.11	■■■□□ 2.41
RPL17-223	ENST00000618613	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.1	■■■□□ 2.41
RPL17-223	ENST00000618613	SYNJ1	O43426	1573 aa		30.09	■■■□□ 2.41
RPL17-223	ENST00000618613	TOP2B	Q02880	1626 aa		30.09	■■■□□ 2.41
RPL17-223	ENST00000618613	ARAP1	Q96P48	1450 aa		30.09	■■■□□ 2.41
RPL17-223	ENST00000618613	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.08	■■■□□ 2.41	5e-6	■■■■■ 29.2
RPL17-223	ENST00000618613	CYB5RL	Q6IPT4	315 aa		30.07	■■■□□ 2.4
RPL17-223	ENST00000618613	ADAMTS12	P58397	1594 aa		29.88	■■■□□ 2.37
RPL17-223	ENST00000618613	GRIN2A	Q12879	1464 aa		29.86	■■■□□ 2.37
RPL17-223	ENST00000618613	ERICH3	Q5RHP9	1530 aa		29.79	■■■□□ 2.36
RPL17-223	ENST00000618613	FHAD1	B1AJZ9	1412 aa		29.78	■■■□□ 2.36
RPL17-223	ENST00000618613	NUP160	Q12769	1436 aa		29.78	■■■□□ 2.36
RPL17-223	ENST00000618613	CEP170	Q5SW79	1584 aa		29.77	■■■□□ 2.36
RPL17-223	ENST00000618613	ERCC6L2	Q5T890	1561 aa		29.7	■■■□□ 2.35
RPL17-223	ENST00000618613	SHROOM2	Q13796	1616 aa		29.62	■■■□□ 2.33
RPL17-223	ENST00000618613	TRH	P20396	242 aa	Predicted RBP	29.61	■■■□□ 2.33
RPL17-223	ENST00000618613	IGF1R	P08069	1367 aa		29.5	■■■□□ 2.31
RPL17-223	ENST00000618613	KIF27	Q86VH2	1401 aa		29.46	■■■□□ 2.31
RPL17-223	ENST00000618613	RUSC2	Q8N2Y8	1516 aa		29.45	■■■□□ 2.31
RPL17-223	ENST00000618613	PRG4	Q92954	1404 aa	Predicted RBP	29.44	■■■□□ 2.3

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