RNA–Protein interactions for RNA: ENST00000615760.4

RPL17-221, Transcript of ribosomal protein L17, humanhuman

TSL 3

Gene RPL17, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-221ENST00000615760 NISCHQ9Y2I1 1504 aa41.73■■■■■ 4.27
RPL17-221ENST00000615760 CCDC180Q9P1Z9 1646 aa37.22■■■■□ 3.55
RPL17-221ENST00000615760 ABCC9O60706 1549 aa36.69■■■■□ 3.46
RPL17-221ENST00000615760 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
RPL17-221ENST00000615760 NACADO15069 1562 aa35.04■■■■□ 3.2
RPL17-221ENST00000615760 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
RPL17-221ENST00000615760 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
RPL17-221ENST00000615760 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
RPL17-221ENST00000615760 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
RPL17-221ENST00000615760 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
RPL17-221ENST00000615760 PABPN1Q86U42 306 aaKnown RBP eCLIP34.22■■■■□ 3.07
RPL17-221ENST00000615760 BICRAQ9NZM4 1560 aa34.17■■■■□ 3.06
RPL17-221ENST00000615760 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
RPL17-221ENST00000615760 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
RPL17-221ENST00000615760 SHROOM4Q9ULL8 1493 aa33.7■■■□□ 2.99
RPL17-221ENST00000615760 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
RPL17-221ENST00000615760 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
RPL17-221ENST00000615760 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
RPL17-221ENST00000615760 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
RPL17-221ENST00000615760 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
RPL17-221ENST00000615760 BAZ1AQ9NRL2 1556 aaPredicted RBP32.33■■■□□ 2.77
RPL17-221ENST00000615760 ATAD2BQ9ULI0 1458 aa32.33■■■□□ 2.77
RPL17-221ENST00000615760 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
RPL17-221ENST00000615760 MROH2BQ7Z745 1585 aa32.17■■■□□ 2.74
RPL17-221ENST00000615760 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
RPL17-221ENST00000615760 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
RPL17-221ENST00000615760 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
RPL17-221ENST00000615760 WIZO95785 1651 aa31.82■■■□□ 2.68
RPL17-221ENST00000615760 NESP48681 1621 aa31.69■■■□□ 2.66
RPL17-221ENST00000615760 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
RPL17-221ENST00000615760 ERCC6Q03468 1493 aa31.59■■■□□ 2.65
RPL17-221ENST00000615760 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
RPL17-221ENST00000615760 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
RPL17-221ENST00000615760 CUX2O14529 1486 aa31.39■■■□□ 2.62
RPL17-221ENST00000615760 CADPSQ9ULU8 1353 aa31.37■■■□□ 2.61
RPL17-221ENST00000615760 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
RPL17-221ENST00000615760 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
RPL17-221ENST00000615760 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
RPL17-221ENST00000615760 CFTRP13569 1480 aa31.14■■■□□ 2.58
RPL17-221ENST00000615760 CCDC88BA6NC98 1476 aa31.07■■■□□ 2.56
RPL17-221ENST00000615760 FANCD2Q9BXW9 1451 aa31.02■■■□□ 2.56
RPL17-221ENST00000615760 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
RPL17-221ENST00000615760 CEP164Q9UPV0 1460 aa31■■■□□ 2.55
RPL17-221ENST00000615760 WDR62O43379 1518 aa30.96■■■□□ 2.55
RPL17-221ENST00000615760 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
RPL17-221ENST00000615760 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
RPL17-221ENST00000615760 DNAJC5Q9H3Z4 198 aa30.76■■■□□ 2.51
RPL17-221ENST00000615760 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
RPL17-221ENST00000615760 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
RPL17-221ENST00000615760 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.46
RPL17-221ENST00000615760 ABCC8Q09428 1581 aa30.43■■■□□ 2.46
RPL17-221ENST00000615760 IFT140Q96RY7 1462 aa30.36■■■□□ 2.45
RPL17-221ENST00000615760 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
RPL17-221ENST00000615760 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
RPL17-221ENST00000615760 TARBP1Q13395 1621 aaKnown RBP30.23■■■□□ 2.43
RPL17-221ENST00000615760 CUX1P39880 1505 aa30.2■■■□□ 2.42
RPL17-221ENST00000615760 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
RPL17-221ENST00000615760 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
RPL17-221ENST00000615760 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
RPL17-221ENST00000615760 SOGA1O94964 1423 aa30.07■■■□□ 2.4
RPL17-221ENST00000615760 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.45e-7■■■■■ 34.9
RPL17-221ENST00000615760 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
RPL17-221ENST00000615760 TDRD9Q8NDG6 1382 aaKnown RBP29.95■■■□□ 2.39
RPL17-221ENST00000615760 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
RPL17-221ENST00000615760 BIVM-ERCC5R4GMW8 1640 aa29.86■■■□□ 2.37
RPL17-221ENST00000615760 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.375e-6■■■■■ 29.2
RPL17-221ENST00000615760 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
RPL17-221ENST00000615760 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
RPL17-221ENST00000615760 CHD1O14646 1710 aa29.85■■■□□ 2.37
RPL17-221ENST00000615760 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
RPL17-221ENST00000615760 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
RPL17-221ENST00000615760 GRIN2BQ13224 1484 aa29.75■■■□□ 2.35
RPL17-221ENST00000615760 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
RPL17-221ENST00000615760 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
RPL17-221ENST00000615760 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
RPL17-221ENST00000615760 MAGI1Q96QZ7 1491 aaPredicted RBP29.71■■■□□ 2.35
RPL17-221ENST00000615760 FBLN2P98095 1184 aa29.69■■■□□ 2.34
RPL17-221ENST00000615760 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
RPL17-221ENST00000615760 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
RPL17-221ENST00000615760 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
RPL17-221ENST00000615760 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
RPL17-221ENST00000615760 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
RPL17-221ENST00000615760 ARHGEF11O15085 1522 aa29.58■■■□□ 2.33
RPL17-221ENST00000615760 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
RPL17-221ENST00000615760 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
RPL17-221ENST00000615760 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
RPL17-221ENST00000615760 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
RPL17-221ENST00000615760 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
RPL17-221ENST00000615760 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
RPL17-221ENST00000615760 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
RPL17-221ENST00000615760 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
RPL17-221ENST00000615760 NUP160Q12769 1436 aa29.28■■■□□ 2.28
RPL17-221ENST00000615760 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
RPL17-221ENST00000615760 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
RPL17-221ENST00000615760 IGF1RP08069 1367 aa29.18■■■□□ 2.26
RPL17-221ENST00000615760 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
RPL17-221ENST00000615760 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
RPL17-221ENST00000615760 CUL7Q14999 1698 aa29.11■■■□□ 2.25
RPL17-221ENST00000615760 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
RPL17-221ENST00000615760 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms