RNA–Protein interactions for RNA: ENST00000579495.1

RPL17-206, Transcript of ribosomal protein L17, humanhuman

TSL 2

Gene RPL17, Length 914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-206ENST00000579495 NISCHQ9Y2I1 1504 aa48.77■■■■■ 5.4
RPL17-206ENST00000579495 ABCC9O60706 1549 aa43.85■■■■■ 4.61
RPL17-206ENST00000579495 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
RPL17-206ENST00000579495 RB1CC1Q8TDY2 1594 aa41.66■■■■■ 4.26
RPL17-206ENST00000579495 DCAF8L2P0C7V8 631 aa41.46■■■■■ 4.23
RPL17-206ENST00000579495 NACADO15069 1562 aa41.35■■■■■ 4.21
RPL17-206ENST00000579495 DNAJC5BQ9UF47 199 aa41.16■■■■■ 4.18
RPL17-206ENST00000579495 PABPN1Q86U42 306 aaKnown RBP eCLIP40.92■■■■■ 4.14
RPL17-206ENST00000579495 MYO15BQ96JP2 1530 aa40.71■■■■■ 4.11
RPL17-206ENST00000579495 UNC13AQ9UPW8 1703 aa40.66■■■■■ 4.1
RPL17-206ENST00000579495 BICRAQ9NZM4 1560 aa40.4■■■■■ 4.06
RPL17-206ENST00000579495 ZCCHC6Q5VYS8 1495 aaKnown RBP40.37■■■■■ 4.05
RPL17-206ENST00000579495 DCAF1Q9Y4B6 1507 aa40.21■■■■■ 4.03
RPL17-206ENST00000579495 SCRIBQ14160 1630 aa39.92■■■■□ 3.98
RPL17-206ENST00000579495 SHROOM4Q9ULL8 1493 aa39.8■■■■□ 3.96
RPL17-206ENST00000579495 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
RPL17-206ENST00000579495 CECR2Q9BXF3 1484 aa39.47■■■■□ 3.91
RPL17-206ENST00000579495 EIF4G1Q04637 1599 aaKnown RBP39.44■■■■□ 3.9
RPL17-206ENST00000579495 NCAPD3P42695 1498 aa38.19■■■■□ 3.7
RPL17-206ENST00000579495 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
RPL17-206ENST00000579495 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
RPL17-206ENST00000579495 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
RPL17-206ENST00000579495 ERCC6Q03468 1493 aa37.88■■■■□ 3.65
RPL17-206ENST00000579495 HMGXB3Q12766 1538 aa37.86■■■■□ 3.65
RPL17-206ENST00000579495 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
RPL17-206ENST00000579495 DNAJC5Q9H3Z4 198 aa37.79■■■■□ 3.64
RPL17-206ENST00000579495 BAZ1BQ9UIG0 1483 aaKnown RBP37.75■■■■□ 3.63
RPL17-206ENST00000579495 CUX2O14529 1486 aa37.71■■■■□ 3.63
RPL17-206ENST00000579495 NESP48681 1621 aa37.65■■■■□ 3.62
RPL17-206ENST00000579495 MROH2BQ7Z745 1585 aa37.6■■■■□ 3.61
RPL17-206ENST00000579495 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
RPL17-206ENST00000579495 LAMC3Q9Y6N6 1575 aa37.32■■■■□ 3.56
RPL17-206ENST00000579495 PDS5BQ9NTI5 1447 aa37.18■■■■□ 3.54
RPL17-206ENST00000579495 THOC2Q8NI27 1593 aaKnown RBP37.16■■■■□ 3.54
RPL17-206ENST00000579495 WIZO95785 1651 aa37.15■■■■□ 3.54
RPL17-206ENST00000579495 KIF21AQ7Z4S6 1674 aa37.1■■■■□ 3.53
RPL17-206ENST00000579495 CADPSQ9ULU8 1353 aa37.08■■■■□ 3.53
RPL17-206ENST00000579495 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
RPL17-206ENST00000579495 MRC2Q9UBG0 1479 aa36.82■■■■□ 3.48
RPL17-206ENST00000579495 CEP164Q9UPV0 1460 aa36.69■■■■□ 3.46
RPL17-206ENST00000579495 WDR62O43379 1518 aa36.67■■■■□ 3.46
RPL17-206ENST00000579495 FANCD2Q9BXW9 1451 aa36.66■■■■□ 3.46
RPL17-206ENST00000579495 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
RPL17-206ENST00000579495 CFTRP13569 1480 aa36.61■■■■□ 3.45
RPL17-206ENST00000579495 URB2Q14146 1524 aaKnown RBP36.33■■■■□ 3.41
RPL17-206ENST00000579495 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
RPL17-206ENST00000579495 TRIM41Q8WV44 630 aa36.26■■■■□ 3.4
RPL17-206ENST00000579495 PRDM2Q13029 1718 aa36.16■■■■□ 3.38
RPL17-206ENST00000579495 OSCARQ8IYS5 282 aa36.13■■■■□ 3.37
RPL17-206ENST00000579495 IFT140Q96RY7 1462 aa35.95■■■■□ 3.35
RPL17-206ENST00000579495 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
RPL17-206ENST00000579495 ZNF608Q9ULD9 1512 aaPredicted RBP35.91■■■■□ 3.34
RPL17-206ENST00000579495 ABCC8Q09428 1581 aa35.87■■■■□ 3.33
RPL17-206ENST00000579495 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
RPL17-206ENST00000579495 EIF4G3O43432 1585 aaKnown RBP35.65■■■■□ 3.3
RPL17-206ENST00000579495 AQRO60306 1485 aaKnown RBP eCLIP35.63■■■■□ 3.295e-7■■■■■ 34.9
RPL17-206ENST00000579495 TARBP1Q13395 1621 aaKnown RBP35.57■■■■□ 3.29
RPL17-206ENST00000579495 POLA1P09884 1462 aaPredicted RBP35.56■■■■□ 3.28
RPL17-206ENST00000579495 RIMBP3CA6NJZ7 1639 aa35.54■■■■□ 3.28
RPL17-206ENST00000579495 RIMBP3BA6NNM3 1639 aa35.54■■■■□ 3.28
RPL17-206ENST00000579495 RIMBP3Q9UFD9 1639 aa35.54■■■■□ 3.28
RPL17-206ENST00000579495 FBLN2P98095 1184 aa35.53■■■■□ 3.28
RPL17-206ENST00000579495 RAD54L2Q9Y4B4 1467 aa35.5■■■■□ 3.27
RPL17-206ENST00000579495 SOGA1O94964 1423 aa35.49■■■■□ 3.27
RPL17-206ENST00000579495 TDRD9Q8NDG6 1382 aaKnown RBP35.44■■■■□ 3.26
RPL17-206ENST00000579495 ARHGEF11O15085 1522 aa35.43■■■■□ 3.26
RPL17-206ENST00000579495 SUPT5HO00267 1087 aaKnown RBP35.41■■■■□ 3.26
RPL17-206ENST00000579495 CHD1O14646 1710 aa35.4■■■■□ 3.26
RPL17-206ENST00000579495 FGD5Q6ZNL6 1462 aa35.37■■■■□ 3.25
RPL17-206ENST00000579495 CYB5RLQ6IPT4 315 aa35.33■■■■□ 3.25
RPL17-206ENST00000579495 CUX1P39880 1505 aa35.32■■■■□ 3.24
RPL17-206ENST00000579495 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
RPL17-206ENST00000579495 CHMP7Q8WUX9 453 aaPredicted RBP35.21■■■■□ 3.23
RPL17-206ENST00000579495 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
RPL17-206ENST00000579495 GRIN2BQ13224 1484 aa35.12■■■■□ 3.21
RPL17-206ENST00000579495 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
RPL17-206ENST00000579495 ARAP1Q96P48 1450 aa35.08■■■■□ 3.21
RPL17-206ENST00000579495 GAPVD1Q14C86 1478 aa35.02■■■■□ 3.2
RPL17-206ENST00000579495 SYNJ1O43426 1573 aa35■■■■□ 3.19
RPL17-206ENST00000579495 SYNJ2O15056 1496 aa34.99■■■■□ 3.19
RPL17-206ENST00000579495 TRHP20396 242 aaPredicted RBP34.99■■■■□ 3.19
RPL17-206ENST00000579495 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
RPL17-206ENST00000579495 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
RPL17-206ENST00000579495 ABCA10Q8WWZ4 1543 aa34.93■■■■□ 3.18
RPL17-206ENST00000579495 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
RPL17-206ENST00000579495 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
RPL17-206ENST00000579495 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
RPL17-206ENST00000579495 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
RPL17-206ENST00000579495 GRIN2AQ12879 1464 aa34.65■■■■□ 3.14
RPL17-206ENST00000579495 ADAMTS12P58397 1594 aa34.59■■■■□ 3.13
RPL17-206ENST00000579495 FHAD1B1AJZ9 1412 aa34.56■■■■□ 3.12
RPL17-206ENST00000579495 NUP160Q12769 1436 aa34.51■■■■□ 3.12
RPL17-206ENST00000579495 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
RPL17-206ENST00000579495 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
RPL17-206ENST00000579495 ERCC6L2Q5T890 1561 aa34.48■■■■□ 3.11
RPL17-206ENST00000579495 SHROOM2Q13796 1616 aa34.31■■■■□ 3.08
RPL17-206ENST00000579495 JPH4Q96JJ6 628 aa34.3■■■■□ 3.08
RPL17-206ENST00000579495 PRG4Q92954 1404 aaPredicted RBP34.27■■■■□ 3.08
RPL17-206ENST00000579495 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
RPL17-206ENST00000579495 IGF1RP08069 1367 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms