RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
AL390334.1-204ENST00000556890 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
AL390334.1-204ENST00000556890 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
AL390334.1-204ENST00000556890 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
AL390334.1-204ENST00000556890 FOXD1Q16676 465 aa21.8■■□□□ 1.08
AL390334.1-204ENST00000556890 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
AL390334.1-204ENST00000556890 MSH5O43196 834 aa20.47■□□□□ 0.87
AL390334.1-204ENST00000556890 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
AL390334.1-204ENST00000556890 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
AL390334.1-204ENST00000556890 ADRA2BP18089 450 aa20.32■□□□□ 0.84
AL390334.1-204ENST00000556890 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
AL390334.1-204ENST00000556890 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
AL390334.1-204ENST00000556890 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
AL390334.1-204ENST00000556890 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
AL390334.1-204ENST00000556890 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
AL390334.1-204ENST00000556890 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
AL390334.1-204ENST00000556890 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
AL390334.1-204ENST00000556890 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
AL390334.1-204ENST00000556890 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
AL390334.1-204ENST00000556890 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
AL390334.1-204ENST00000556890 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
AL390334.1-204ENST00000556890 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
AL390334.1-204ENST00000556890 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
AL390334.1-204ENST00000556890 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
AL390334.1-204ENST00000556890 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
AL390334.1-204ENST00000556890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
AL390334.1-204ENST00000556890 KCNA4P22459 653 aa17.01■□□□□ 0.31
AL390334.1-204ENST00000556890 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
AL390334.1-204ENST00000556890 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
AL390334.1-204ENST00000556890 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
AL390334.1-204ENST00000556890 CAPN15O75808 1086 aa16.42■□□□□ 0.22
AL390334.1-204ENST00000556890 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
AL390334.1-204ENST00000556890 APLP2Q06481 763 aa16.36■□□□□ 0.21
AL390334.1-204ENST00000556890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
AL390334.1-204ENST00000556890 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
AL390334.1-204ENST00000556890 DSG3P32926 999 aa16.32■□□□□ 0.2
AL390334.1-204ENST00000556890 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
AL390334.1-204ENST00000556890 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
AL390334.1-204ENST00000556890 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
AL390334.1-204ENST00000556890 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
AL390334.1-204ENST00000556890 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
AL390334.1-204ENST00000556890 ABCB7O75027 752 aa15.99■□□□□ 0.15
AL390334.1-204ENST00000556890 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
AL390334.1-204ENST00000556890 POLA2Q14181 598 aa15.74■□□□□ 0.11
AL390334.1-204ENST00000556890 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
AL390334.1-204ENST00000556890 ZBTB22O15209 634 aa15.61■□□□□ 0.09
AL390334.1-204ENST00000556890 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
AL390334.1-204ENST00000556890 POTEHQ6S545 545 aa15.57■□□□□ 0.08
AL390334.1-204ENST00000556890 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
AL390334.1-204ENST00000556890 ATXN8OSP0DMR3 200 aa15.5■□□□□ 0.07
AL390334.1-204ENST00000556890 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
AL390334.1-204ENST00000556890 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
AL390334.1-204ENST00000556890 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
AL390334.1-204ENST00000556890 FBLN2P98095 1184 aa15.12■□□□□ 0.01
AL390334.1-204ENST00000556890 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
AL390334.1-204ENST00000556890 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
AL390334.1-204ENST00000556890 SPDYE6P0CI01 402 aa15□□□□□ -0.01
AL390334.1-204ENST00000556890 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
AL390334.1-204ENST00000556890 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
AL390334.1-204ENST00000556890 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
AL390334.1-204ENST00000556890 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
AL390334.1-204ENST00000556890 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
AL390334.1-204ENST00000556890 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
AL390334.1-204ENST00000556890 FXR2P51116 673 aaKnown RBP eCLIP14.8□□□□□ -0.04
AL390334.1-204ENST00000556890 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
AL390334.1-204ENST00000556890 SSUH2Q9Y2M2 353 aa14.78□□□□□ -0.04
AL390334.1-204ENST00000556890 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
AL390334.1-204ENST00000556890 ABCC9O60706 1549 aa14.73□□□□□ -0.05
AL390334.1-204ENST00000556890 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
AL390334.1-204ENST00000556890 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
AL390334.1-204ENST00000556890 SP7Q8TDD2 431 aaPredicted RBP14.62□□□□□ -0.07
AL390334.1-204ENST00000556890 HAX1O00165 279 aa14.59□□□□□ -0.07
AL390334.1-204ENST00000556890 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
AL390334.1-204ENST00000556890 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
AL390334.1-204ENST00000556890 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
AL390334.1-204ENST00000556890 EVX2Q03828 476 aa14.34□□□□□ -0.11
AL390334.1-204ENST00000556890 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
AL390334.1-204ENST00000556890 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
AL390334.1-204ENST00000556890 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
AL390334.1-204ENST00000556890 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
AL390334.1-204ENST00000556890 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
AL390334.1-204ENST00000556890 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
AL390334.1-204ENST00000556890 GABBR2O75899 941 aa14.08□□□□□ -0.16
AL390334.1-204ENST00000556890 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
AL390334.1-204ENST00000556890 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
AL390334.1-204ENST00000556890 CLCN6P51797 869 aa14.02□□□□□ -0.17
AL390334.1-204ENST00000556890 NACADO15069 1562 aa13.98□□□□□ -0.17
AL390334.1-204ENST00000556890 PROM2Q8N271 834 aa13.96□□□□□ -0.17
AL390334.1-204ENST00000556890 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
AL390334.1-204ENST00000556890 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
AL390334.1-204ENST00000556890 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
AL390334.1-204ENST00000556890 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
AL390334.1-204ENST00000556890 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
AL390334.1-204ENST00000556890 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
AL390334.1-204ENST00000556890 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
AL390334.1-204ENST00000556890 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
AL390334.1-204ENST00000556890 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
AL390334.1-204ENST00000556890 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
AL390334.1-204ENST00000556890 LHX8Q68G74 356 aa13.71□□□□□ -0.21
AL390334.1-204ENST00000556890 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms