RNA–Protein interactions for RNA: ENST00000582782.5

RPL17-215, Transcript of ribosomal protein L17, humanhuman

TSL 3

Gene RPL17, Length 562 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-215ENST00000582782 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
RPL17-215ENST00000582782 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
RPL17-215ENST00000582782 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
RPL17-215ENST00000582782 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
RPL17-215ENST00000582782 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
RPL17-215ENST00000582782 FOXD1Q16676 465 aa18.6■□□□□ 0.57
RPL17-215ENST00000582782 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
RPL17-215ENST00000582782 MSH5O43196 834 aa17.8■□□□□ 0.44
RPL17-215ENST00000582782 ADRA2BP18089 450 aa17.71■□□□□ 0.43
RPL17-215ENST00000582782 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
RPL17-215ENST00000582782 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
RPL17-215ENST00000582782 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
RPL17-215ENST00000582782 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
RPL17-215ENST00000582782 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
RPL17-215ENST00000582782 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
RPL17-215ENST00000582782 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
RPL17-215ENST00000582782 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
RPL17-215ENST00000582782 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
RPL17-215ENST00000582782 KCNA4P22459 653 aa15.8■□□□□ 0.12
RPL17-215ENST00000582782 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
RPL17-215ENST00000582782 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
RPL17-215ENST00000582782 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
RPL17-215ENST00000582782 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
RPL17-215ENST00000582782 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
RPL17-215ENST00000582782 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
RPL17-215ENST00000582782 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
RPL17-215ENST00000582782 POTEHQ6S545 545 aa15.03■□□□□ -0
RPL17-215ENST00000582782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
RPL17-215ENST00000582782 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
RPL17-215ENST00000582782 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
RPL17-215ENST00000582782 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
RPL17-215ENST00000582782 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
RPL17-215ENST00000582782 ZBTB22O15209 634 aa14.52□□□□□ -0.09
RPL17-215ENST00000582782 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
RPL17-215ENST00000582782 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
RPL17-215ENST00000582782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
RPL17-215ENST00000582782 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
RPL17-215ENST00000582782 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
RPL17-215ENST00000582782 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
RPL17-215ENST00000582782 APLP2Q06481 763 aa14.27□□□□□ -0.13
RPL17-215ENST00000582782 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
RPL17-215ENST00000582782 CAPN15O75808 1086 aa14.14□□□□□ -0.15
RPL17-215ENST00000582782 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
RPL17-215ENST00000582782 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
RPL17-215ENST00000582782 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
RPL17-215ENST00000582782 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
RPL17-215ENST00000582782 DSG3P32926 999 aa13.9□□□□□ -0.18
RPL17-215ENST00000582782 ABCB7O75027 752 aa13.86□□□□□ -0.19
RPL17-215ENST00000582782 POLA2Q14181 598 aa13.79□□□□□ -0.2
RPL17-215ENST00000582782 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
RPL17-215ENST00000582782 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
RPL17-215ENST00000582782 FBLN2P98095 1184 aa13.5□□□□□ -0.25
RPL17-215ENST00000582782 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
RPL17-215ENST00000582782 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
RPL17-215ENST00000582782 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
RPL17-215ENST00000582782 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
RPL17-215ENST00000582782 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
RPL17-215ENST00000582782 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
RPL17-215ENST00000582782 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
RPL17-215ENST00000582782 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
RPL17-215ENST00000582782 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
RPL17-215ENST00000582782 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
RPL17-215ENST00000582782 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
RPL17-215ENST00000582782 FKBP8Q14318 412 aa13.02□□□□□ -0.33
RPL17-215ENST00000582782 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPL17-215ENST00000582782 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
RPL17-215ENST00000582782 PROM2Q8N271 834 aa12.84□□□□□ -0.35
RPL17-215ENST00000582782 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
RPL17-215ENST00000582782 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
RPL17-215ENST00000582782 HAX1O00165 279 aa12.82□□□□□ -0.36
RPL17-215ENST00000582782 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
RPL17-215ENST00000582782 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
RPL17-215ENST00000582782 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
RPL17-215ENST00000582782 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
RPL17-215ENST00000582782 EVX2Q03828 476 aa12.68□□□□□ -0.38
RPL17-215ENST00000582782 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
RPL17-215ENST00000582782 LHX8Q68G74 356 aa12.65□□□□□ -0.38
RPL17-215ENST00000582782 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
RPL17-215ENST00000582782 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPL17-215ENST00000582782 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
RPL17-215ENST00000582782 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
RPL17-215ENST00000582782 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
RPL17-215ENST00000582782 MIER1Q8N108 512 aa12.44□□□□□ -0.42
RPL17-215ENST00000582782 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
RPL17-215ENST00000582782 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
RPL17-215ENST00000582782 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
RPL17-215ENST00000582782 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
RPL17-215ENST00000582782 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
RPL17-215ENST00000582782 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
RPL17-215ENST00000582782 GABBR2O75899 941 aa12.27□□□□□ -0.45
RPL17-215ENST00000582782 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPL17-215ENST00000582782 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
RPL17-215ENST00000582782 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
RPL17-215ENST00000582782 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
RPL17-215ENST00000582782 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
RPL17-215ENST00000582782 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
RPL17-215ENST00000582782 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
RPL17-215ENST00000582782 NUBP1P53384 320 aa12.11□□□□□ -0.47
RPL17-215ENST00000582782 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
RPL17-215ENST00000582782 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms