RNA–Protein interactions for RNA: ENST00000553392.5

AL390334.1-202, humanhuman

TSL 3

Gene AL390334.1, Length 674 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-202ENST00000553392 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
AL390334.1-202ENST00000553392 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
AL390334.1-202ENST00000553392 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
AL390334.1-202ENST00000553392 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
AL390334.1-202ENST00000553392 POTEDQ86YR6 584 aa19.62■□□□□ 0.73
AL390334.1-202ENST00000553392 FOXD1Q16676 465 aa19.11■□□□□ 0.65
AL390334.1-202ENST00000553392 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
AL390334.1-202ENST00000553392 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
AL390334.1-202ENST00000553392 ADRA2BP18089 450 aa17.87■□□□□ 0.45
AL390334.1-202ENST00000553392 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
AL390334.1-202ENST00000553392 MSH5O43196 834 aa17.81■□□□□ 0.44
AL390334.1-202ENST00000553392 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
AL390334.1-202ENST00000553392 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
AL390334.1-202ENST00000553392 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
AL390334.1-202ENST00000553392 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
AL390334.1-202ENST00000553392 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
AL390334.1-202ENST00000553392 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
AL390334.1-202ENST00000553392 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
AL390334.1-202ENST00000553392 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
AL390334.1-202ENST00000553392 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
AL390334.1-202ENST00000553392 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
AL390334.1-202ENST00000553392 KCNA4P22459 653 aa15.32■□□□□ 0.04
AL390334.1-202ENST00000553392 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
AL390334.1-202ENST00000553392 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
AL390334.1-202ENST00000553392 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
AL390334.1-202ENST00000553392 POTEHQ6S545 545 aa15.12■□□□□ 0.01
AL390334.1-202ENST00000553392 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
AL390334.1-202ENST00000553392 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
AL390334.1-202ENST00000553392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
AL390334.1-202ENST00000553392 NISCHQ9Y2I1 1504 aa14.84□□□□□ -0.03
AL390334.1-202ENST00000553392 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
AL390334.1-202ENST00000553392 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
AL390334.1-202ENST00000553392 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
AL390334.1-202ENST00000553392 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
AL390334.1-202ENST00000553392 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
AL390334.1-202ENST00000553392 CAPN15O75808 1086 aa14.31□□□□□ -0.12
AL390334.1-202ENST00000553392 DSG3P32926 999 aa14.31□□□□□ -0.12
AL390334.1-202ENST00000553392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
AL390334.1-202ENST00000553392 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
AL390334.1-202ENST00000553392 APLP2Q06481 763 aa14.2□□□□□ -0.14
AL390334.1-202ENST00000553392 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
AL390334.1-202ENST00000553392 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
AL390334.1-202ENST00000553392 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
AL390334.1-202ENST00000553392 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
AL390334.1-202ENST00000553392 ZBTB22O15209 634 aa14.08□□□□□ -0.16
AL390334.1-202ENST00000553392 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
AL390334.1-202ENST00000553392 ABCB7O75027 752 aa14.01□□□□□ -0.17
AL390334.1-202ENST00000553392 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
AL390334.1-202ENST00000553392 POLA2Q14181 598 aa13.81□□□□□ -0.2
AL390334.1-202ENST00000553392 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
AL390334.1-202ENST00000553392 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
AL390334.1-202ENST00000553392 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
AL390334.1-202ENST00000553392 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
AL390334.1-202ENST00000553392 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
AL390334.1-202ENST00000553392 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
AL390334.1-202ENST00000553392 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
AL390334.1-202ENST00000553392 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
AL390334.1-202ENST00000553392 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
AL390334.1-202ENST00000553392 FBLN2P98095 1184 aa13.2□□□□□ -0.3
AL390334.1-202ENST00000553392 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
AL390334.1-202ENST00000553392 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
AL390334.1-202ENST00000553392 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
AL390334.1-202ENST00000553392 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
AL390334.1-202ENST00000553392 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
AL390334.1-202ENST00000553392 FKBP8Q14318 412 aa13.06□□□□□ -0.32
AL390334.1-202ENST00000553392 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
AL390334.1-202ENST00000553392 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
AL390334.1-202ENST00000553392 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
AL390334.1-202ENST00000553392 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
AL390334.1-202ENST00000553392 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
AL390334.1-202ENST00000553392 HAX1O00165 279 aa12.91□□□□□ -0.34
AL390334.1-202ENST00000553392 ABCC9O60706 1549 aa12.85□□□□□ -0.35
AL390334.1-202ENST00000553392 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
AL390334.1-202ENST00000553392 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
AL390334.1-202ENST00000553392 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
AL390334.1-202ENST00000553392 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
AL390334.1-202ENST00000553392 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
AL390334.1-202ENST00000553392 LHX8Q68G74 356 aa12.72□□□□□ -0.37
AL390334.1-202ENST00000553392 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
AL390334.1-202ENST00000553392 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
AL390334.1-202ENST00000553392 EVX2Q03828 476 aa12.62□□□□□ -0.39
AL390334.1-202ENST00000553392 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
AL390334.1-202ENST00000553392 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
AL390334.1-202ENST00000553392 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
AL390334.1-202ENST00000553392 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
AL390334.1-202ENST00000553392 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
AL390334.1-202ENST00000553392 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
AL390334.1-202ENST00000553392 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
AL390334.1-202ENST00000553392 PROM2Q8N271 834 aa12.41□□□□□ -0.42
AL390334.1-202ENST00000553392 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
AL390334.1-202ENST00000553392 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
AL390334.1-202ENST00000553392 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
AL390334.1-202ENST00000553392 GABBR2O75899 941 aa12.31□□□□□ -0.44
AL390334.1-202ENST00000553392 NACADO15069 1562 aa12.29□□□□□ -0.44
AL390334.1-202ENST00000553392 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
AL390334.1-202ENST00000553392 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
AL390334.1-202ENST00000553392 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
AL390334.1-202ENST00000553392 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
AL390334.1-202ENST00000553392 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
AL390334.1-202ENST00000553392 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms