RNA–Protein interactions for RNA: ENST00000618619.4

RPL17-224, Transcript of ribosomal protein L17, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPL17, Length 747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-224ENST00000618619 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
RPL17-224ENST00000618619 ABCC9O60706 1549 aa24.37■■□□□ 1.49
RPL17-224ENST00000618619 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
RPL17-224ENST00000618619 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
RPL17-224ENST00000618619 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
RPL17-224ENST00000618619 NACADO15069 1562 aa22.78■■□□□ 1.24
RPL17-224ENST00000618619 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
RPL17-224ENST00000618619 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
RPL17-224ENST00000618619 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
RPL17-224ENST00000618619 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
RPL17-224ENST00000618619 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
RPL17-224ENST00000618619 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
RPL17-224ENST00000618619 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
RPL17-224ENST00000618619 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
RPL17-224ENST00000618619 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
RPL17-224ENST00000618619 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
RPL17-224ENST00000618619 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
RPL17-224ENST00000618619 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
RPL17-224ENST00000618619 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
RPL17-224ENST00000618619 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
RPL17-224ENST00000618619 CUX2O14529 1486 aa21.13■□□□□ 0.97
RPL17-224ENST00000618619 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
RPL17-224ENST00000618619 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
RPL17-224ENST00000618619 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
RPL17-224ENST00000618619 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
RPL17-224ENST00000618619 NESP48681 1621 aa20.86■□□□□ 0.93
RPL17-224ENST00000618619 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
RPL17-224ENST00000618619 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
RPL17-224ENST00000618619 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
RPL17-224ENST00000618619 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
RPL17-224ENST00000618619 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
RPL17-224ENST00000618619 PEG3Q9GZU2 1588 aa20.66■□□□□ 0.9
RPL17-224ENST00000618619 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
RPL17-224ENST00000618619 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
RPL17-224ENST00000618619 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
RPL17-224ENST00000618619 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
RPL17-224ENST00000618619 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
RPL17-224ENST00000618619 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
RPL17-224ENST00000618619 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
RPL17-224ENST00000618619 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
RPL17-224ENST00000618619 WDR62O43379 1518 aa20.35■□□□□ 0.85
RPL17-224ENST00000618619 WIZO95785 1651 aa20.24■□□□□ 0.83
RPL17-224ENST00000618619 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
RPL17-224ENST00000618619 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
RPL17-224ENST00000618619 CFTRP13569 1480 aa20.11■□□□□ 0.81
RPL17-224ENST00000618619 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
RPL17-224ENST00000618619 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
RPL17-224ENST00000618619 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
RPL17-224ENST00000618619 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
RPL17-224ENST00000618619 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
RPL17-224ENST00000618619 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
RPL17-224ENST00000618619 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
RPL17-224ENST00000618619 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
RPL17-224ENST00000618619 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
RPL17-224ENST00000618619 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
RPL17-224ENST00000618619 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
RPL17-224ENST00000618619 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
RPL17-224ENST00000618619 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
RPL17-224ENST00000618619 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
RPL17-224ENST00000618619 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
RPL17-224ENST00000618619 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
RPL17-224ENST00000618619 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
RPL17-224ENST00000618619 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
RPL17-224ENST00000618619 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.734e-7■■■■■ 31.3
RPL17-224ENST00000618619 CHD1O14646 1710 aa19.61■□□□□ 0.73
RPL17-224ENST00000618619 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
RPL17-224ENST00000618619 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
RPL17-224ENST00000618619 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
RPL17-224ENST00000618619 FBLN2P98095 1184 aa19.48■□□□□ 0.71
RPL17-224ENST00000618619 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
RPL17-224ENST00000618619 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
RPL17-224ENST00000618619 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
RPL17-224ENST00000618619 SOGA1O94964 1423 aa19.41■□□□□ 0.7
RPL17-224ENST00000618619 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
RPL17-224ENST00000618619 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
RPL17-224ENST00000618619 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
RPL17-224ENST00000618619 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
RPL17-224ENST00000618619 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
RPL17-224ENST00000618619 CUX1P39880 1505 aa19.3■□□□□ 0.68
RPL17-224ENST00000618619 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
RPL17-224ENST00000618619 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
RPL17-224ENST00000618619 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
RPL17-224ENST00000618619 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
RPL17-224ENST00000618619 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
RPL17-224ENST00000618619 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
RPL17-224ENST00000618619 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
RPL17-224ENST00000618619 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
RPL17-224ENST00000618619 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
RPL17-224ENST00000618619 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
RPL17-224ENST00000618619 NUP160Q12769 1436 aa19.02■□□□□ 0.64
RPL17-224ENST00000618619 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
RPL17-224ENST00000618619 ADAMTS12P58397 1594 aa19■□□□□ 0.63
RPL17-224ENST00000618619 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
RPL17-224ENST00000618619 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.622e-6■■■□□ 19
RPL17-224ENST00000618619 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
RPL17-224ENST00000618619 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
RPL17-224ENST00000618619 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
RPL17-224ENST00000618619 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
RPL17-224ENST00000618619 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
RPL17-224ENST00000618619 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms