RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 NISCHQ9Y2I1 1504 aa42.07■■■■■ 4.33
C4A-250ENST00000469975 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
C4A-250ENST00000469975 ABCC9O60706 1549 aa37.59■■■■□ 3.61
C4A-250ENST00000469975 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
C4A-250ENST00000469975 NACADO15069 1562 aa35.54■■■■□ 3.28
C4A-250ENST00000469975 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
C4A-250ENST00000469975 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
C4A-250ENST00000469975 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
C4A-250ENST00000469975 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
C4A-250ENST00000469975 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
C4A-250ENST00000469975 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
C4A-250ENST00000469975 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
C4A-250ENST00000469975 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
C4A-250ENST00000469975 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
C4A-250ENST00000469975 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
C4A-250ENST00000469975 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
C4A-250ENST00000469975 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
C4A-250ENST00000469975 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
C4A-250ENST00000469975 SMARCA4P51532 1647 aa32.82■■■□□ 2.84
C4A-250ENST00000469975 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
C4A-250ENST00000469975 ATAD2BQ9ULI0 1458 aa32.77■■■□□ 2.84
C4A-250ENST00000469975 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
C4A-250ENST00000469975 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
C4A-250ENST00000469975 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
C4A-250ENST00000469975 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
C4A-250ENST00000469975 BAZ1BQ9UIG0 1483 aaKnown RBP32.47■■■□□ 2.79
C4A-250ENST00000469975 PEG3Q9GZU2 1588 aa32.43■■■□□ 2.78
C4A-250ENST00000469975 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
C4A-250ENST00000469975 NESP48681 1621 aa32.37■■■□□ 2.77
C4A-250ENST00000469975 CUX2O14529 1486 aa32.22■■■□□ 2.75
C4A-250ENST00000469975 WIZO95785 1651 aa32.14■■■□□ 2.74
C4A-250ENST00000469975 LAMC3Q9Y6N6 1575 aa32.06■■■□□ 2.72
C4A-250ENST00000469975 DNAJC5Q9H3Z4 198 aa32.04■■■□□ 2.72
C4A-250ENST00000469975 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
C4A-250ENST00000469975 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
C4A-250ENST00000469975 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
C4A-250ENST00000469975 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
C4A-250ENST00000469975 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
C4A-250ENST00000469975 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
C4A-250ENST00000469975 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
C4A-250ENST00000469975 WDR62O43379 1518 aa31.53■■■□□ 2.64
C4A-250ENST00000469975 CEP164Q9UPV0 1460 aa31.51■■■□□ 2.63
C4A-250ENST00000469975 CFTRP13569 1480 aa31.5■■■□□ 2.63
C4A-250ENST00000469975 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
C4A-250ENST00000469975 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
C4A-250ENST00000469975 PRDM2Q13029 1718 aa31.31■■■□□ 2.6
C4A-250ENST00000469975 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
C4A-250ENST00000469975 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
C4A-250ENST00000469975 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
C4A-250ENST00000469975 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
C4A-250ENST00000469975 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
C4A-250ENST00000469975 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
C4A-250ENST00000469975 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
C4A-250ENST00000469975 OSCARQ8IYS5 282 aa30.77■■■□□ 2.52
C4A-250ENST00000469975 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
C4A-250ENST00000469975 TARBP1Q13395 1621 aaKnown RBP30.68■■■□□ 2.5
C4A-250ENST00000469975 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
C4A-250ENST00000469975 AQRO60306 1485 aaKnown RBP eCLIP30.6■■■□□ 2.49
C4A-250ENST00000469975 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
C4A-250ENST00000469975 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
C4A-250ENST00000469975 CHD1O14646 1710 aa30.51■■■□□ 2.47
C4A-250ENST00000469975 CUX1P39880 1505 aa30.5■■■□□ 2.47
C4A-250ENST00000469975 RIMBP3CA6NJZ7 1639 aa30.48■■■□□ 2.47
C4A-250ENST00000469975 RIMBP3BA6NNM3 1639 aa30.48■■■□□ 2.47
C4A-250ENST00000469975 RIMBP3Q9UFD9 1639 aa30.48■■■□□ 2.47
C4A-250ENST00000469975 FGD5Q6ZNL6 1462 aa30.48■■■□□ 2.47
C4A-250ENST00000469975 SOGA1O94964 1423 aa30.47■■■□□ 2.47
C4A-250ENST00000469975 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
C4A-250ENST00000469975 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
C4A-250ENST00000469975 FBLN2P98095 1184 aa30.35■■■□□ 2.45
C4A-250ENST00000469975 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
C4A-250ENST00000469975 SNAPC4Q5SXM2 1469 aa30.29■■■□□ 2.44
C4A-250ENST00000469975 PBRM1Q86U86 1689 aa30.19■■■□□ 2.42
C4A-250ENST00000469975 GRIN2BQ13224 1484 aa30.18■■■□□ 2.42
C4A-250ENST00000469975 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
C4A-250ENST00000469975 CYB5RLQ6IPT4 315 aa30.11■■■□□ 2.41
C4A-250ENST00000469975 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
C4A-250ENST00000469975 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
C4A-250ENST00000469975 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
C4A-250ENST00000469975 ABCA5Q8WWZ7 1642 aa30.09■■■□□ 2.41
C4A-250ENST00000469975 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
C4A-250ENST00000469975 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
C4A-250ENST00000469975 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
C4A-250ENST00000469975 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
C4A-250ENST00000469975 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
C4A-250ENST00000469975 TOP2BQ02880 1626 aa30.02■■■□□ 2.4
C4A-250ENST00000469975 WRNQ14191 1432 aaPredicted RBP eCLIP29.99■■■□□ 2.39
C4A-250ENST00000469975 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
C4A-250ENST00000469975 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
C4A-250ENST00000469975 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
C4A-250ENST00000469975 TRHP20396 242 aaPredicted RBP29.72■■■□□ 2.35
C4A-250ENST00000469975 ERCC6L2Q5T890 1561 aa29.71■■■□□ 2.35
C4A-250ENST00000469975 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
C4A-250ENST00000469975 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
C4A-250ENST00000469975 NUP160Q12769 1436 aa29.68■■■□□ 2.34
C4A-250ENST00000469975 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
C4A-250ENST00000469975 RUSC2Q8N2Y8 1516 aa29.43■■■□□ 2.3
C4A-250ENST00000469975 PRG4Q92954 1404 aaPredicted RBP29.41■■■□□ 2.3
C4A-250ENST00000469975 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
C4A-250ENST00000469975 IGF1RP08069 1367 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms