RNA–Protein interactions for RNA: ENST00000581373.5

RPL17-212, Transcript of ribosomal protein L17, humanhuman

TSL 2 BASIC

Gene RPL17, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-212ENST00000581373 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1
RPL17-212ENST00000581373 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
RPL17-212ENST00000581373 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
RPL17-212ENST00000581373 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
RPL17-212ENST00000581373 ABCC9O60706 1549 aa18.64■□□□□ 0.58
RPL17-212ENST00000581373 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
RPL17-212ENST00000581373 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
RPL17-212ENST00000581373 NACADO15069 1562 aa17.86■□□□□ 0.45
RPL17-212ENST00000581373 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
RPL17-212ENST00000581373 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
RPL17-212ENST00000581373 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
RPL17-212ENST00000581373 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
RPL17-212ENST00000581373 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
RPL17-212ENST00000581373 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
RPL17-212ENST00000581373 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
RPL17-212ENST00000581373 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
RPL17-212ENST00000581373 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
RPL17-212ENST00000581373 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
RPL17-212ENST00000581373 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
RPL17-212ENST00000581373 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.3
RPL17-212ENST00000581373 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
RPL17-212ENST00000581373 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
RPL17-212ENST00000581373 FOXD1Q16676 465 aa16.69■□□□□ 0.26
RPL17-212ENST00000581373 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
RPL17-212ENST00000581373 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
RPL17-212ENST00000581373 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
RPL17-212ENST00000581373 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
RPL17-212ENST00000581373 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
RPL17-212ENST00000581373 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
RPL17-212ENST00000581373 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
RPL17-212ENST00000581373 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
RPL17-212ENST00000581373 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
RPL17-212ENST00000581373 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
RPL17-212ENST00000581373 WIZO95785 1651 aa16.21■□□□□ 0.18
RPL17-212ENST00000581373 NESP48681 1621 aa16.12■□□□□ 0.17
RPL17-212ENST00000581373 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
RPL17-212ENST00000581373 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
RPL17-212ENST00000581373 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
RPL17-212ENST00000581373 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
RPL17-212ENST00000581373 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
RPL17-212ENST00000581373 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
RPL17-212ENST00000581373 CUX2O14529 1486 aa15.94■□□□□ 0.14
RPL17-212ENST00000581373 CFTRP13569 1480 aa15.92■□□□□ 0.14
RPL17-212ENST00000581373 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
RPL17-212ENST00000581373 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
RPL17-212ENST00000581373 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
RPL17-212ENST00000581373 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
RPL17-212ENST00000581373 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
RPL17-212ENST00000581373 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
RPL17-212ENST00000581373 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
RPL17-212ENST00000581373 WDR62O43379 1518 aa15.74■□□□□ 0.11
RPL17-212ENST00000581373 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
RPL17-212ENST00000581373 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
RPL17-212ENST00000581373 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
RPL17-212ENST00000581373 ADRA2BP18089 450 aa15.63■□□□□ 0.09
RPL17-212ENST00000581373 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
RPL17-212ENST00000581373 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
RPL17-212ENST00000581373 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
RPL17-212ENST00000581373 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
RPL17-212ENST00000581373 MSH5O43196 834 aa15.53■□□□□ 0.08
RPL17-212ENST00000581373 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
RPL17-212ENST00000581373 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
RPL17-212ENST00000581373 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
RPL17-212ENST00000581373 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
RPL17-212ENST00000581373 CUX1P39880 1505 aa15.41■□□□□ 0.06
RPL17-212ENST00000581373 SOGA1O94964 1423 aa15.38■□□□□ 0.05
RPL17-212ENST00000581373 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
RPL17-212ENST00000581373 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
RPL17-212ENST00000581373 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
RPL17-212ENST00000581373 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■■■■■ 31.3
RPL17-212ENST00000581373 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
RPL17-212ENST00000581373 EIF4G3O43432 1585 aaKnown RBP15.31■□□□□ 0.04
RPL17-212ENST00000581373 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 19
RPL17-212ENST00000581373 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
RPL17-212ENST00000581373 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
RPL17-212ENST00000581373 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
RPL17-212ENST00000581373 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
RPL17-212ENST00000581373 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
RPL17-212ENST00000581373 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
RPL17-212ENST00000581373 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
RPL17-212ENST00000581373 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
RPL17-212ENST00000581373 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
RPL17-212ENST00000581373 FBLN2P98095 1184 aa15.16■□□□□ 0.02
RPL17-212ENST00000581373 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
RPL17-212ENST00000581373 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
RPL17-212ENST00000581373 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
RPL17-212ENST00000581373 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
RPL17-212ENST00000581373 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
RPL17-212ENST00000581373 CHD1O14646 1710 aa15.08■□□□□ 0
RPL17-212ENST00000581373 PBRM1Q86U86 1689 aa15.06■□□□□ 0
RPL17-212ENST00000581373 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
RPL17-212ENST00000581373 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
RPL17-212ENST00000581373 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
RPL17-212ENST00000581373 ADAMTS12P58397 1594 aa15□□□□□ -0.01
RPL17-212ENST00000581373 TRIM41Q8WV44 630 aa15□□□□□ -0.01
RPL17-212ENST00000581373 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
RPL17-212ENST00000581373 GRIN2AQ12879 1464 aa15□□□□□ -0.01
RPL17-212ENST00000581373 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
RPL17-212ENST00000581373 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
RPL17-212ENST00000581373 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms